EY728638

Overview
NameEY728638
Unique NameEY728638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728638 vs. ExPASy Swiss-Prot
Match: SOXA_RHOSG (Dibenzothiophene desulfurization enzyme A OS=Rhodococcus sp. (strain IGTS8) GN=soxA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.964e-12
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = -2 
Query:    6 HGLWTHPRDTSTQYKTLEYWTELAQLLERGLFDGLFIADIVGVYDVYQNSVDVPLKESIQLPVN-DPLLLVSAMAAVTKNLGFGLTANLTYEPPYLFAR 299
            HG W H  D S  + + +Y+  +A+ LERG FD LF+ D + V D Y +++D  +    Q  V  +P  +V+ MAAVT++LG G T + TY PPY  AR
Sbjct:   22 HGAWRHT-DASNDFLSGKYYQHIARTLERGKFDLLFLPDGLAVEDSYGDNLDTGVGLGGQGAVALEPASVVATMAAVTEHLGLGATISATYYPPYHVAR 119
The following BLAST results are available for this feature:
BLAST of EY728638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SOXA_RHOSG8.964e-1241.41Dibenzothiophene desulfurization enzyme A OS=Rhodo... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-E07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728638 ID=EY728638; Name=EY728638; organism=Citrus sinensis; type=EST; length=774bp
ATGCGCCGGGCGAACAGATACGGCGGTTCGTAGGTGAGGTTGGCGGTCAG
GCCGAAGCCGAGGTTTTTGGTCACCGCCGCCATGGCCGAGACCAGTAGCA
ACGGGTCGTTGACCGGCAGCTGGATCGACTCTTTGAGCGGCACATCCACC
GAGTTCTGGTAGACGTCGTACACCCCGACGATGTCAGCGATGAACAGCCC
GTCGAACAGTCCGCGCTCCAGCAGCTGTGCCAGTTCGGTCCAGTATTCGA
GGGTCTTGTATTGAGTCGAAGTGTCCCGTGGATGGGTCCACAGGCCATGG
TTGATGTGCCCGATGCAGTTCATGTTGAAGGCATTGAGCAGGATCTTTTT
CTTTGCCATCAGATAGTCCCCCGCAGTGGCGGGTTTTCATCGTTGAGGTA
GTAATTGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGT
GCACCCGAGCGTTGCGCCAGTGGCGGTCCAGACCGTGTTCGGCGAGGGTG
GCCTGACGTGCCGCGAGTTCGAACCGGGTGCTGGCCGCGGTCAGGCAATT
CTCGGTGCTCCAGGCGCGCTCGTCGGGGAGGGCCATTGTGGCCGCCGTGC
GTGAGTATCGCGCACGGTGGCCCGTGGGTTGCACGCGATAGCCCCCGCGC
CGTTCCCGGTCGGTGGAGTGCGGGTGCGTGCGGGGGCGGGGCGGATGTGG
GGCATTACGGGGAGGCGGTCGGCAGGTTTGTGGCGTGAAGCAAGTGGGGT
GGGTCCTGCGCTGGTAGTGCTGGA
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