EY728614
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_RHILO (Choline dehydrogenase OS=Rhizobium loti GN=betA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 6.710e-47 Identity = 91/223 (40.81%), Postives = 139/223 (62.33%), Query Frame = -1 Query: 18 SLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 686 S+ P ++ML+GIG + L+ G + PGVG+ LQDH+ + IQ + K ++ L+P + +GA+W+ +SGLGA+N+FE AF R V+Y ++++ F+P + A + GFQ MR SRGSVT S DPKA P+IR N+++ P D + R +R TRE+ Q ++D RG+E+SPG H+QSD +L+ +IRD+A + +H C TC+MG Sbjct: 253 SINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQDHMELYIQQESTKP-ITLNSVLNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRAGVDYPDIQYHFIPAAVRYDGKAAAKSHGFQAHVGPMRSKSRGSVTLRSPDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQEISPGSHVQSDDDLDVFIRDHAESAYHPCGTCKMG 474
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_CITK8 (Choline dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=betA PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44 Identity = 91/224 (40.62%), Postives = 134/224 (59.82%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+GD LK L HH PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN+FE G F R ++ + N+++ FLP+ + A GFQ MR SRG V S+DP+ P I N+++ D ++ R+ +R TRE+I Q + D+ RG E+SPG Q+D +L+A++RD+A T FH C TC+MG DEMA Sbjct: 264 PQILQRSGVGDASLLKAFDIPLVHHLPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSSEAFSWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVHIKSRDPREHPAILFNYMSTGQDWQEFRDAIRITREIINQPALDKYRGREISPGITCQTDEQLDAFVRDHAETAFHPCGTCKMGYDEMA 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA2_CHRSD (Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44 Identity = 94/225 (41.78%), Postives = 136/225 (60.44%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITP-GFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+P+ LK LG + H PGVG+ LQDH+ + IQY K+ +S AL + +GA W+ +G+GASN FE F R D E+ NL++ FLP + Y GK+ + GFQ MR SRG + SKDP A P I N++ D E+ R+ +R TRE+IAQ ++D RG E+SPG +QSD EL+ +++ +A T +H C +CRMG +MA Sbjct: 266 PQILQRSGVGNPEWLKELGIPVVHELPGVGENLQDHLEMYIQYEC-KEPISLYPALKWYNQPKIGAEWLFKGTGVGASNQFESCGFIRSRDDEEWPNLQYHFLP-IAISYNGKSAVQAHGFQAHVGSMRSESRGRIRLTSKDPHAAPSILFNYMAKEKDWEEFRDAIRLTREIIAQPAFDRYRGREISPGPDVQSDEELDNFVKQHAETAYHPCGSCRMGEGDMA 488
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIBY (Choline dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44 Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK + ++ H PGVG+ LQDH+ + +QY KQ VS AL + +GA W+ +G+GASN FE G F R +D+ ++ N+++ FLP+ + A GFQ MR SRG + SKDP A P I N+++ D + R+ +R TRE++ Q + D RG+E+SPGKHLQ+DAEL+ ++R++A T +H +C+MG DEMA Sbjct: 268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIBS (Choline dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44 Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK + ++ H PGVG+ LQDH+ + +QY KQ VS AL + +GA W+ +G+GASN FE G F R +D+ ++ N+++ FLP+ + A GFQ MR SRG + SKDP A P I N+++ D + R+ +R TRE++ Q + D RG+E+SPGKHLQ+DAEL+ ++R++A T +H +C+MG DEMA Sbjct: 268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIBC (Choline dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44 Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK + ++ H PGVG+ LQDH+ + +QY KQ VS AL + +GA W+ +G+GASN FE G F R +D+ ++ N+++ FLP+ + A GFQ MR SRG + SKDP A P I N+++ D + R+ +R TRE++ Q + D RG+E+SPGKHLQ+DAEL+ ++R++A T +H +C+MG DEMA Sbjct: 268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIB5 (Choline dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44 Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK + ++ H PGVG+ LQDH+ + +QY KQ VS AL + +GA W+ +G+GASN FE G F R +D+ ++ N+++ FLP+ + A GFQ MR SRG + SKDP A P I N+++ D + R+ +R TRE++ Q + D RG+E+SPGKHLQ+DAEL+ ++R++A T +H +C+MG DEMA Sbjct: 268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIB3 (Choline dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44 Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G LK + ++ H PGVG+ LQDH+ + +QY KQ VS AL + +GA W+ +G+GASN FE G F R +D+ ++ N+++ FLP+ + A GFQ MR SRG + SKDP A P I N+++ D + R+ +R TRE++ Q + D RG+E+SPGKHLQ+DAEL+ ++R++A T +H +C+MG DEMA Sbjct: 268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_KLEP3 (Choline dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.639e-43 Identity = 89/224 (39.73%), Postives = 133/224 (59.38%), Query Frame = -1 Query: 3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674 P ++ +G+G+P+ L+ + H PGVG+ LQDH+ + +QY K+ VS AL + +GA W+ +G+GASN FE G F R + + N+++ FLP+ + A GFQ MR SRG V S+DP A P I N+++ D ++ R+ +R TRE++ Q + D+ RG E+SPG QSDAEL+ ++R++A T FH C TC+MG DEMA Sbjct: 264 PQILQRSGVGNPELLRQFDIPVVHDLPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEAGGFIRSRAEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRLKSRDPHAHPAILFNYMSHEQDWQEFRDAIRITREIMNQPALDKYRGREISPGTECQSDAELDEFVRNHAETAFHPCGTCKMGYDEMA 486
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA1_CHRSD (Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.639e-43 Identity = 95/251 (37.85%), Postives = 144/251 (57.37%), Query Frame = -1 Query: 18 RQGGVRVKYKVNAWTIHPAAKQGSSVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITP-GFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 767 R GV + K A + + ++ P ++ +G+G+P+ L+ + H PGVG+ LQDH+ + IQY K+ +S AL + +GA W+ G+GASN FE F R NDQ E+ NL++ FLP + Y GK+ + GFQ MR SRG + S+DPKA P I N+++ D ++ R+ +R TRE+I Q + DE RG E+SPG ++QSDAEL+ ++R +A T +H +C+MG Sbjct: 235 RAVGVSYERKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVVHELPGVGENLQDHLEMYIQYEC-KKPISLYPALKWYNQPKIGAEWLFFGKGIGASNQFEAAGFIRTNDQEEWPNLQYHFLP-IAISYNGKSAVQAHGFQAHVGSMRSMSRGRIRLTSRDPKAAPSILFNYMSHDKDWQEFRDAIRITREIIEQPTMDEYRGREISPGPNVQSDAELDEFVRQHAETAYHPAGSCKMG 483 The following BLAST results are available for this feature:
BLAST of EY728614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 128
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728614 ID=EY728614; Name=EY728614; organism=Citrus sinensis; type=EST; length=782bpback to top |