EY728614

Overview
NameEY728614
Unique NameEY728614
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_RHILO (Choline dehydrogenase OS=Rhizobium loti GN=betA PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.710e-47
Identity = 91/223 (40.81%), Postives = 139/223 (62.33%), Query Frame = -1
Query:   18 SLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 686
            S+  P ++ML+GIG  + L+  G  +    PGVG+ LQDH+ + IQ  + K  ++    L+P  +  +GA+W+  +SGLGA+N+FE  AF R    V+Y ++++ F+P    +    A  + GFQ     MR  SRGSVT  S DPKA P+IR N+++ P D  + R  +R TRE+  Q ++D  RG+E+SPG H+QSD +L+ +IRD+A + +H C TC+MG
Sbjct:  253 SINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQDHMELYIQQESTKP-ITLNSVLNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRAGVDYPDIQYHFIPAAVRYDGKAAAKSHGFQAHVGPMRSKSRGSVTLRSPDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAFRGQEISPGSHVQSDDDLDVFIRDHAESAYHPCGTCKMG 474          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_CITK8 (Choline dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=betA PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44
Identity = 91/224 (40.62%), Postives = 134/224 (59.82%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+GD   LK     L HH PGVG+ LQDH+ + +QY   K+ VS   AL    +  +GA W+   +G+GASN+FE G F R ++   + N+++ FLP+   +    A    GFQ     MR  SRG V   S+DP+  P I  N+++   D ++ R+ +R TRE+I Q + D+ RG E+SPG   Q+D +L+A++RD+A T FH C TC+MG DEMA
Sbjct:  264 PQILQRSGVGDASLLKAFDIPLVHHLPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGVGASNHFEAGGFIRSSEAFSWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVHIKSRDPREHPAILFNYMSTGQDWQEFRDAIRITREIINQPALDKYRGREISPGITCQTDEQLDAFVRDHAETAFHPCGTCKMGYDEMA 486          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA2_CHRSD (Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.399e-44
Identity = 94/225 (41.78%), Postives = 136/225 (60.44%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITP-GFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G+P+ LK LG  + H  PGVG+ LQDH+ + IQY   K+ +S   AL    +  +GA W+   +G+GASN FE   F R  D  E+ NL++ FLP +   Y GK+ +   GFQ     MR  SRG +   SKDP A P I  N++    D E+ R+ +R TRE+IAQ ++D  RG E+SPG  +QSD EL+ +++ +A T +H C +CRMG  +MA
Sbjct:  266 PQILQRSGVGNPEWLKELGIPVVHELPGVGENLQDHLEMYIQYEC-KEPISLYPALKWYNQPKIGAEWLFKGTGVGASNQFESCGFIRSRDDEEWPNLQYHFLP-IAISYNGKSAVQAHGFQAHVGSMRSESRGRIRLTSKDPHAAPSILFNYMAKEKDWEEFRDAIRLTREIIAQPAFDRYRGREISPGPDVQSDEELDNFVKQHAETAYHPCGSCRMGEGDMA 488          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIBY (Choline dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G    LK +  ++ H  PGVG+ LQDH+ + +QY   KQ VS   AL    +  +GA W+   +G+GASN FE G F R +D+ ++ N+++ FLP+   +    A    GFQ     MR  SRG +   SKDP A P I  N+++   D  + R+ +R TRE++ Q + D  RG+E+SPGKHLQ+DAEL+ ++R++A T +H   +C+MG DEMA
Sbjct:  268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIBS (Choline dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G    LK +  ++ H  PGVG+ LQDH+ + +QY   KQ VS   AL    +  +GA W+   +G+GASN FE G F R +D+ ++ N+++ FLP+   +    A    GFQ     MR  SRG +   SKDP A P I  N+++   D  + R+ +R TRE++ Q + D  RG+E+SPGKHLQ+DAEL+ ++R++A T +H   +C+MG DEMA
Sbjct:  268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIBC (Choline dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G    LK +  ++ H  PGVG+ LQDH+ + +QY   KQ VS   AL    +  +GA W+   +G+GASN FE G F R +D+ ++ N+++ FLP+   +    A    GFQ     MR  SRG +   SKDP A P I  N+++   D  + R+ +R TRE++ Q + D  RG+E+SPGKHLQ+DAEL+ ++R++A T +H   +C+MG DEMA
Sbjct:  268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIB5 (Choline dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G    LK +  ++ H  PGVG+ LQDH+ + +QY   KQ VS   AL    +  +GA W+   +G+GASN FE G F R +D+ ++ N+++ FLP+   +    A    GFQ     MR  SRG +   SKDP A P I  N+++   D  + R+ +R TRE++ Q + D  RG+E+SPGKHLQ+DAEL+ ++R++A T +H   +C+MG DEMA
Sbjct:  268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_ACIB3 (Choline dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.944e-44
Identity = 90/224 (40.18%), Postives = 136/224 (60.71%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G    LK +  ++ H  PGVG+ LQDH+ + +QY   KQ VS   AL    +  +GA W+   +G+GASN FE G F R +D+ ++ N+++ FLP+   +    A    GFQ     MR  SRG +   SKDP A P I  N+++   D  + R+ +R TRE++ Q + D  RG+E+SPGKHLQ+DAEL+ ++R++A T +H   +C+MG DEMA
Sbjct:  268 PQILQRSGVGQSTFLKSMDIDVVHDLPGVGENLQDHLEMYLQYKC-KQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFKWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMSTEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSCSCKMGEDEMA 490          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA_KLEP3 (Choline dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.639e-43
Identity = 89/224 (39.73%), Postives = 133/224 (59.38%), Query Frame = -1
Query:    3 PAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITPGFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMGVDEMA 674
            P ++  +G+G+P+ L+     + H  PGVG+ LQDH+ + +QY   K+ VS   AL    +  +GA W+   +G+GASN FE G F R   +  + N+++ FLP+   +    A    GFQ     MR  SRG V   S+DP A P I  N+++   D ++ R+ +R TRE++ Q + D+ RG E+SPG   QSDAEL+ ++R++A T FH C TC+MG DEMA
Sbjct:  264 PQILQRSGVGNPELLRQFDIPVVHDLPGVGENLQDHLEMYLQYEC-KEPVSLYPALQWWNQPKIGAEWLFGGTGIGASNQFEAGGFIRSRAEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRLKSRDPHAHPAILFNYMSHEQDWQEFRDAIRITREIMNQPALDKYRGREISPGTECQSDAELDEFVRNHAETAFHPCGTCKMGYDEMA 486          
BLAST of EY728614 vs. ExPASy Swiss-Prot
Match: BETA1_CHRSD (Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.639e-43
Identity = 95/251 (37.85%), Postives = 144/251 (57.37%), Query Frame = -1
Query:   18 RQGGVRVKYKVNAWTIHPAAKQGSSVRSLRFPAVVMLAGIGDPDELKPLGXELRHHCPGVGKXLQDHVPVAIQYSTPKQGVSPTRALSPLGRLFVGARWMAARSGLGASNYFEVGAFFRGNDQVEYANLEHEFLPMVGEFYRGKARITP-GFQYFTSVMRPASRGSVTXASKDPKADPLIRLNFLTAPGDLEQLREGLRKTREMIAQRSWDELRGEELSPGKHLQSDAELEAWIRDNAGTTFHACSTCRMG 767
            R  GV  + K  A  +    +      ++  P ++  +G+G+P+ L+     + H  PGVG+ LQDH+ + IQY   K+ +S   AL    +  +GA W+    G+GASN FE   F R NDQ E+ NL++ FLP +   Y GK+ +   GFQ     MR  SRG +   S+DPKA P I  N+++   D ++ R+ +R TRE+I Q + DE RG E+SPG ++QSDAEL+ ++R +A T +H   +C+MG
Sbjct:  235 RAVGVSYERKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVVHELPGVGENLQDHLEMYIQYEC-KKPISLYPALKWYNQPKIGAEWLFFGKGIGASNQFEAAGFIRTNDQEEWPNLQYHFLP-IAISYNGKSAVQAHGFQAHVGSMRSMSRGRIRLTSRDPKAAPSILFNYMSHDKDWQEFRDAIRITREIIEQPTMDEYRGREISPGPNVQSDAELDEFVRQHAETAYHPAGSCKMG 483          
The following BLAST results are available for this feature:
BLAST of EY728614 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
BETA_RHILO6.710e-4740.81Choline dehydrogenase OS=Rhizobium loti GN=betA PE... [more]
BETA_CITK81.399e-4440.63Choline dehydrogenase OS=Citrobacter koseri (strai... [more]
BETA2_CHRSD1.399e-4441.78Choline dehydrogenase OS=Chromohalobacter salexige... [more]
BETA_ACIBY6.944e-4440.18Choline dehydrogenase OS=Acinetobacter baumannii (... [more]
BETA_ACIBS6.944e-4440.18Choline dehydrogenase OS=Acinetobacter baumannii (... [more]
BETA_ACIBC6.944e-4440.18Choline dehydrogenase OS=Acinetobacter baumannii (... [more]
BETA_ACIB56.944e-4440.18Choline dehydrogenase OS=Acinetobacter baumannii (... [more]
BETA_ACIB36.944e-4440.18Choline dehydrogenase OS=Acinetobacter baumannii (... [more]
BETA_KLEP32.639e-4339.73Choline dehydrogenase OS=Klebsiella pneumoniae (st... [more]
BETA1_CHRSD2.639e-4337.85Choline dehydrogenase OS=Chromohalobacter salexige... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-C05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728614 ID=EY728614; Name=EY728614; organism=Citrus sinensis; type=EST; length=782bp
ACCGCCATCTCGTCCACCCCCATGCGGCAGGTGGAACAGGCGTGGAAAGT
GGTGCCGGCGTTGTCGCGGATCCAGGCTTCCAGCTCGGCATCGCTCTGCA
GGTGCTTGCCGGGGCTGAGCTCCTCGCCGCGCAGTTCGTCCCAGGAGCGC
TGGGCGATCATTTCCCGGGTCTTGCGCAGGCCTTCGCGCAGTTGCTCCAG
GTCGCCCGGCGCGGTGAGGAAGTTCAGGCGGATCAGCGGATCGGCCTTGG
GATCCTTCGAGGCCANGGTGACGCTGCCACGACTGGCCGGGCGCATGACG
CTGGTGAAGTACTGGAAGCCCGGGGTGATGCGCGCCTTGCCGCGGTAGAA
CTCGCCCACCATGGGGAGAAATTCGTGCTCCAGGTTGGCGTACTCGACCT
GGTCGTTGCCACGGAAGAACGCCCCCACCTCGAAGTAGTTGGACGCCCCC
AGGCCACTGCGCGCGGCCATCCAGCGCGCCCCGACGAACAGCCGCCCGAG
CGGCGACAGCGCGCGGGTCGGCGACACACCCTGCTTGGGCGTCGAATACT
GGATCGCCACGGGCACGTGGTCCTGCAGGTNCTTGCCGACCCCGGGGCAG
TGGTGGCGCAGCTCNATGCCGAGGGGCTTGAGCTCGTCCGGATCACCGAT
GCCGGCGAGCATCACAACTGCCGGGAACCGGAGGGACCGGACTGAGGATC
CTTGCTTGGCGGCAGGATGGATTGTCCAGGCATTGACTTTGTATTTCACC
CTAACGCCTCCTTGCCGAAAAAACCACCCGCC
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