EY728611

Overview
NameEY728611
Unique NameEY728611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length224
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10747 contig Csv1_Contig10747:1..224. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
[Close]
BLAST of EY728611 vs. ExPASy Swiss-Prot
Match: NTRC_SALTY (Nitrogen regulation protein NR(I) OS=Salmonella typhimurium GN=glnG PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.473e-11
Identity = 36/78 (46.15%), Postives = 47/78 (60.26%), Query Frame = -1 
Query:    3 SGREVHISDLPPELL--SLPQDSA--PVTNWEQALRQWADQALARGQSNLLDSAVPAFERIMIETALKHTAGRRRDAA 224
            +G+EV I DLP EL   S P   +  P  +W   L QWAD+AL  G  NLL  A P  ER ++ TAL+HT G +++AA
Sbjct:  372 AGQEVLIQDLPGELFEASTPDSPSHLPPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAA 449
The following BLAST results are available for this feature:
BLAST of EY728611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NTRC_SALTY4.473e-1146.15Nitrogen regulation protein NR(I) OS=Salmonella ty... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-006-B10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728611 ID=EY728611; Name=EY728611; organism=Citrus sinensis; type=EST; length=224bp
ACGGCAGCGTCGCGACGACGACCGGCGGTATGCTTGAGGGCGGTTTCGAT
CATGATCCGCTCGAAAGCCGGCACAGCGCTGTCCAGCAGGTTCGACTGGC
CACGTGCCAAGGCCTGATCGGCCCACTGGCGCAATGCCTGCTCCCAGTTG
GTCACCGGCGCCGAATCCTGCGGCAGGCTCAACAGCTCAGGCGGCAGGTC
GCTGATATGCACTTCGCGACCCGA
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