EY728576

Overview
NameEY728576
Unique NameEY728576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11758 contig Csv1_Contig11758:1..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.322e-39
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1
Query:  367 SDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFV 549
            SDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFV
Sbjct:  280 SDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFV 340          

HSP 2 Score: 51.9878 bits (123), Expect = 9.322e-39
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 2
Query:  551 DENSLRPASKAVNQRDADLLHFW 619
            DENSLRPASKAVNQRDADLLHFW
Sbjct:  341 DENSLRPASKAVNQRDADLLHFW 363          

HSP 3 Score: 79.337 bits (194), Expect = 3.005e-14
Identity = 32/33 (96.97%), Postives = 32/33 (96.97%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            S WGTYCPGEIPGPPPEYSTCLGDLYSIAWMED
Sbjct:  247 SSWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 279          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.859e-26
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 1
Query:  367 SDIHNLRTETLHQQYELVKTRTASYN-SYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFVG*ELLK 567
            S +HNL+TETLHQQYELVK RTA    SYGSHVMQYGD+G+SK+NL  Y+GTNPANDN+TF     LK
Sbjct:  279 SGMHNLQTETLHQQYELVKRRTAPVGYSYGSHVMQYGDVGISKDNLDLYMGTNPANDNFTFADANSLK 346          

HSP 2 Score: 41.2022 bits (95), Expect = 3.859e-26
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 2
Query:  551 DENSLRPASKAVNQRDADLLHFW 619
            D NSL+P S+  NQRDADL+HFW
Sbjct:  341 DANSLKPPSRVTNQRDADLVHFW 363          

HSP 3 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            S WGTYCPGE P PPPEY TCLGDLYS+AWMED
Sbjct:  246 SSWGTYCPGEEPSPPPEYETCLGDLYSVAWMED 278          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.443e-25
Identity = 47/62 (75.81%), Postives = 52/62 (83.87%), Query Frame = 1
Query:  367 SDIHNLRTETLHQQYELVKTRTASYNSY-GSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFV 549
            SD HNLRTETLHQQY+LVK RT S   Y GSHVMQYGD+GLSK+ LF YLGT+PAN+N TFV
Sbjct:  269 SDRHNLRTETLHQQYKLVKERTISGGLYYGSHVMQYGDVGLSKDILFHYLGTDPANENLTFV 330          

HSP 2 Score: 43.5134 bits (101), Expect = 2.443e-25
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 2
Query:  551 DENSLRPASKAVNQRDADLLHFW 619
            DENSL  +SKAVNQRDADL+HFW
Sbjct:  331 DENSLWSSSKAVNQRDADLVHFW 353          

HSP 3 Score: 73.9442 bits (180), Expect = 1.262e-12
Identity = 29/33 (87.88%), Postives = 30/33 (90.91%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            S WGTYCPGE P PPPEYSTCLGDLYS+AWMED
Sbjct:  236 SSWGTYCPGEDPSPPPEYSTCLGDLYSVAWMED 268          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 5.766e-24
Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 1
Query:  367 SDIHNLRTETLHQQYELVKTRTA-SYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFV 549
            S+ HNL+TETLH+QYELVK RTA S  SYGSHVM++GDIGLSK  L  ++GTNPA++N+TFV
Sbjct:  264 SEKHNLQTETLHEQYELVKKRTAGSGKSYGSHVMEFGDIGLSKEKLVLFMGTNPADENFTFV 325          

HSP 2 Score: 41.9726 bits (97), Expect = 5.766e-24
Identity = 16/23 (69.57%), Postives = 20/23 (86.96%), Query Frame = 2
Query:  551 DENSLRPASKAVNQRDADLLHFW 619
            +ENS+RP S+  NQRDADL+HFW
Sbjct:  326 NENSIRPPSRVTNQRDADLVHFW 348          

HSP 3 Score: 67.781 bits (164), Expect = 9.047e-11
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            S WGTYCPGE P PP EY TCLGDLYS+AW+ED
Sbjct:  231 SSWGTYCPGEDPSPPSEYETCLGDLYSVAWIED 263          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.798e-23
Identity = 44/61 (72.13%), Postives = 53/61 (86.89%), Query Frame = 1
Query:  367 SDIHNLRTETLHQQYELVKTRTASYNSYGSHVMQYGDIGLSKNNLFTYLGTNPANDNYTFV 549
            S++HNL+TE+L QQY+LVK RT S   YGSHVM+YGDIGLSKN+L+ YLGTNPANDN +FV
Sbjct:  276 SEVHNLQTESLQQQYKLVKNRTIS-EPYGSHVMEYGDIGLSKNDLYQYLGTNPANDNNSFV 335          

HSP 2 Score: 36.5798 bits (83), Expect = 2.798e-23
Identity = 18/24 (75.00%), Postives = 19/24 (79.17%), Query Frame = 2
Query:  554 ENSL--RPASKAVNQRDADLLHFW 619
            ENSL  R  S AVNQRDADL+HFW
Sbjct:  339 ENSLKLRTPSAAVNQRDADLIHFW 362          

HSP 3 Score: 69.707 bits (169), Expect = 2.381e-11
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            S WG YCPG+ P PPPEYSTCLGDLYSIAWMED
Sbjct:  243 SSWGYYCPGDKPPPPPEYSTCLGDLYSIAWMED 275          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 3.316e-11
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  367 SDIHNLRTETLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDNY 540
            S+ HNL+ ET+ QQY+ V+ RT++ NSY  GSHVMQYGD  ++   L+ Y G +PA  N+
Sbjct:  260 SETHNLKRETVQQQYQSVRKRTSNSNSYRFGSHVMQYGDTNITAEKLYLYHGFDPATVNF 319          

HSP 2 Score: 25.0238 bits (53), Expect = 3.316e-11
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 2
Query:  560 SLRPASKAVNQRDADLLHFW 619
            +L    + VNQRDA+LL  W
Sbjct:  325 NLEAKMEVVNQRDAELLFMW 344          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.304e-11
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            S WGTYCPG  P PPPE++TCLGDLYS+AWMED
Sbjct:  249 SSWGTYCPGMEPSPPPEFTTCLGDLYSVAWMED 281          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 62.7734 bits (151), Expect = 5.583e-11
Identity = 29/59 (49.15%), Postives = 40/59 (67.80%), Query Frame = 1
Query:  367 SDIHNLRTETLHQQYELVKTRTASYNSY--GSHVMQYGDIGLSKNNLFTYLGTNPANDN 537
            S+ HNL+ ET+ QQY  VK RT++YN+Y  GSHVM+YG+  +    L+ Y G +PA  N
Sbjct:  271 SETHNLKKETIKQQYHTVKMRTSNYNTYSGGSHVMEYGNNSIKSEKLYLYQGFDPATVN 329          

HSP 2 Score: 25.7942 bits (55), Expect = 5.583e-11
Identity = 14/23 (60.87%), Postives = 14/23 (60.87%), Query Frame = 2
Query:  557 NSLRPASK--AVNQRDADLLHFW 619
            N L   SK   VNQRDADLL  W
Sbjct:  333 NELPVKSKIGVVNQRDADLLFLW 355          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            + WGTYCPG  P PPPEY TCLGDLYS+AWMED
Sbjct:  247 NSWGTYCPGMDPSPPPEYITCLGDLYSVAWMED 279          
BLAST of EY728576 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.047e-11
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 2
Query:    8 SGWGTYCPGEIPGPPPEYSTCLGDLYSIAWMED 106
            + WGTYCPG  P PPPEY TCLGDLYS+AWMED
Sbjct:  245 NSWGTYCPGMYPPPPPEYITCLGDLYSVAWMED 277          
The following BLAST results are available for this feature:
BLAST of EY728576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI9.322e-39100.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEG_ARATH3.859e-2670.59Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE1_PHAVU2.443e-2575.81Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEA_ARATH5.766e-2469.35Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_VICSA2.798e-2372.13Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
LEGU_CANEN3.316e-1150.00Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPE_RICCO5.304e-1178.79Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPEB_ARATH5.583e-1149.15Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
VPE_SOYBN9.047e-1178.79Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU9.047e-1178.79Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-F11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728576 ID=EY728576; Name=EY728576; organism=Citrus sinensis; type=EST; length=860bp
CCACGCGTCCGGTTGGGGGACCTATTGTCCTGGAGAGATTCCTGGTCCTC
CCCCTGAATATAGCACTTGTTTGGGTGACTTGTATAGTATTGCTTGGATG
GAGGACAGGTATGACAACATTTATGATTTTATTTATTTCACTTTGGCAAC
ATTTTTCTGTTTCCTTGAGTAACAACATGTCTATGTCTGTCTTCTGTAAT
CTCTGAAAATAGAAGAAAAGTACTGGTTTGACCGAATTTATTAACTTACT
GAACAAAACTTTTCTAAAAATTTATCATTTTGTGCAGTTTTTTTCCTAGA
GAAGCAGTGTGTGCGTGTGCCTTTTTTTTTTTTTTTGGGTGAATTTTAAT
ATTTTGACCTTTGCACAGTGACATACACAACTTGCGGACAGAAACTCTTC
ACCAGCAGTATGAACTGGTTAAAACAAGGACTGCTAGTTACAATTCGTAT
GGCTCTCATGTCATGCAATATGGTGATATCGGTCTTAGCAAGAACAATCT
CTTCACGTACTTGGGTACAAATCCTGCAAATGATAACTACACTTTTGTGG
GATGAGAACTCCTTAAGGCCAGCATCTAAAGCTGTTAACCAGCGAGATGC
CGATCTCTTGCATTTCTGGGGACAGGTATGTATCCAACAATGCACATAGC
TCATTAAATTGAATGCTGNCTCTCTANCGTATTTTATTCATTTACTTTTT
CAATCCCCATGTGGGGGATGGATCACAATTCTATGTTCACATGGGTTTGA
AAGTTTGCCTCTCGTTGTTGAGGTTGGTGTAACTGTATAAGGTCTTATGA
TTGGTTTAGTTGGAATTAGGAAAGAAGTAATGATGTACCAAGCATGGTAG
TACCCTGATA
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