EY728536

Overview
NameEY728536
Unique NameEY728536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 1.466e-80
Identity = 141/209 (67.46%), Postives = 165/209 (78.95%), Query Frame = 1
Query:   70 MATDT-VVAEHRSSNNGH-GCCAKG-PVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            MAT+T VVA    SN G  GCC  G P YATPL  MSGP EK +YVT +YTGTG +KPDYL TVD DPSS SYS VIHRLP+P++GDELHHSGWNSCSSC+GD S  RR+LVLPSL+SGRIY +DT++NPRAPSL+K V+P +I  KT L++PHTAH LA+G+IL SCLGD++GNA GNG LLLDS F +K R EK   SP +GYDF Y
Sbjct:    1 MATETEVVAPVTVSNGGSKGCCKYGGPGYATPLAAMSGPSEKLIYVTAVYTGTGIDKPDYLATVDVDPSSPSYSSVIHRLPMPFVGDELHHSGWNSCSSCHGDASVDRRYLVLPSLISGRIYAIDTKENPRAPSLYKYVDPKEIADKTGLAFPHTAHCLATGEILVSCLGDEEGNAKGNGFLLLDSDFNIKNRWEKPGHSPLYGYDFWY 209          

HSP 2 Score: 29.261 bits (64), Expect = 1.466e-80
Identity = 14/30 (46.67%), Postives = 19/30 (63.33%), Query Frame = 2
Query:  710 NSSWGTPW-LSQRLQLXHVSDGLYGGSVCV 796
            ++SWG P   S+   L HV+DGLYG  + V
Sbjct:  218 STSWGAPKAFSKGFNLQHVADGLYGSHLHV 247          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.620e-58
Identity = 105/188 (55.85%), Postives = 130/188 (69.15%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C   GP Y+TPLE M GPRE+ +Y+ C+Y  TG E PDYL TVD DP S  YS+VIHRLP+PY+ DELHHSGWN+CSSC+GD++  R  L+LP L+S RIYVVD    PRAP LHKV+E ++I  K  +S  HT+H LASG+++ S LGD  GN  G+ +LL    F VKG  EK   +   GYDF Y
Sbjct:    5 CTKCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSSLHTSHCLASGEVMVSTLGDLQGNGKGSFVLLDGETFEVKGTWEKPGDAAPMGYDFWY 192          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP2_MOUSE (Selenium-binding protein 2 OS=Mus musculus GN=Selenbp2 PE=1 SV=2)

HSP 1 Score: 225.328 bits (573), Expect = 3.610e-58
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C   GP Y TPLE M GPRE+ +Y+ C+Y  TG E PDYL TVD DP S  YS+VIHRLP+PY+ DELHHSGWN+CSSC+GD++  R  L+LP L+S RIYVVD    PRAP LHKV+E ++I  K  +S  HT+H LASG+++ + LGD  GN  G+ +LL    F VKG  EK   +   GYDF Y
Sbjct:    5 CTKCGPGYPTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLPMPYLKDELHHSGWNTCSSCFGDSTKSRNKLILPGLISSRIYVVDVGSEPRAPKLHKVIEASEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGSFVLLDGETFEVKGTWEKPGGASPMGYDFWY 192          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.610e-58
Identity = 106/188 (56.38%), Postives = 128/188 (68.09%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C   GP YATPLE M GPRE+ +Y+ C+Y  TG E PDYL TVD DP S  YS+VIHRLP+P++ DELHHSGWN+CSSC+GD++  R  L+LPS++S RIYVVD    PRAP LHKV+EP +I  K  L   HT+H LASG+++ S LGD  GN  G  +LL    F VKG  EK       GYDF Y
Sbjct:    5 CTKCGPGYATPLEAMKGPREEIVYLPCIYRNTGIEAPDYLATVDVDPKSPHYSQVIHRLPMPHLKDELHHSGWNTCSSCFGDSTKSRDKLILPSIISSRIYVVDVGSEPRAPKLHKVIEPNEIHAKCNLGNLHTSHCLASGEVMISSLGDPQGNGKGGFVLLDGETFEVKGTWEKPGGEAPMGYDFWY 192          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 4.714e-58
Identity = 106/188 (56.38%), Postives = 129/188 (68.62%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C   GP Y+TPLE M GPRE+ +Y+ C+Y  TG E PDYL TVD DP S  Y +VIHRLP+P + DELHHSGWN+CSSC+GD++  R  LVLPSL+S RIYVVD    PRAP LHKV+EP DI  K  L++ HT+H LASG+++ S LGD  GN  G  +LL    F VKG  E+   +   GYDF Y
Sbjct:    5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRAPKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDGETFEVKGTWERPGGAAPLGYDFWY 192          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.791e-57
Identity = 105/188 (55.85%), Postives = 128/188 (68.09%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C + GP Y +PL+ M GPRE+ +Y+ C+Y  TG  KPDYL TVD DP S SYS+VIHRLP+P + DELHHSGWN+CSSCYGD+S  R  L+LP L+S RIYVVD   +PRAP +HK VEP ++  K  L+ PHT+H L  G+I+ S LGD  GN  G  +LL    F VKG  E    S  FGYDF Y
Sbjct:    4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPSYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRIYVVDVGSDPRAPRIHKTVEPYEVFWKCGLANPHTSHCLGCGEIMISSLGDPCGNGKGGFVLLDGETFEVKGNWEVEGESAQFGYDFWY 191          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.056e-57
Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1
Query:  127 CAK-GPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C K GP Y +PLE M GPRE+ +Y+ C+Y  TG E PDYL TVD +P S  YS+VIHRLP+P + DELHHSGWN+CSSC+GD++  R  L+LPSL+S R+YVVD    PRAP LHKVVEP +I  K  LSY HT+H LASG+++ S LGD  GN  G  +LL    F VKG  E+   +   GYDF Y
Sbjct:    5 CGKCGPGYPSPLEAMKGPREELVYLPCIYRNTGTEAPDYLATVDVNPKSPQYSQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLLLPSLISSRVYVVDVATEPRAPKLHKVVEPEEIHAKCDLSYLHTSHCLASGEVMISALGDPRGNGKGGFVLLDGETFEVKGTWEQPGGAAPMGYDFWY 192          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.891e-57
Identity = 105/188 (55.85%), Postives = 128/188 (68.09%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C   GP Y+TPLE M GPRE+ +Y+ C+Y  TG E PDYL TVD DP S  Y +VIHRLP+P + DELHHSGWN+CSSC+GD++  R  LVLPSL+S RIYVVD    PRA  LHKV+EP DI  K  L++ HT+H LASG+++ S LGD  GN  G  +LL    F VKG  E+   +   GYDF Y
Sbjct:    5 CGNCGPGYSTPLEAMKGPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYCQVIHRLPMPNLKDELHHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRALKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKGGFVLLDAETFEVKGTWERRGGAAPLGYDFWY 192          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.527e-56
Identity = 102/188 (54.26%), Postives = 127/188 (67.55%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C + GP Y +PL+ M GPRE+ +Y+ C+Y  TG  KPDYL TVD DP S +YS+VIHRLP+P + DELHHSGWN+CSSCYGD+S  R  L+LP L+S R+YVVD   +PRAP LHK VEP ++  K  L+  HT+H L  G+I+ S LGD  GN  G  +LL    F VKG  E    +  FGYDF Y
Sbjct:    4 CGSCGPGYKSPLDAMKGPREEIVYLPCIYRSTGINKPDYLATVDVDPKSPTYSQVIHRLPMPNVNDELHHSGWNTCSSCYGDSSKVRNKLILPCLISSRVYVVDVGTDPRAPRLHKTVEPHEVYWKCGLANLHTSHCLGCGEIMISALGDPCGNGKGGFVLLDGETFEVKGNWEAEGETAQFGYDFWY 191          
BLAST of EY728536 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.735e-55
Identity = 101/188 (53.72%), Postives = 126/188 (67.02%), Query Frame = 1
Query:  124 CCAKGPVYATPLETMSGPREKHLYVTCLYTGTGREKPDYLPTVDADPSSSSYSKVIHRLPVPYIGDELHHSGWNSCSSCYGDTSAQRRFLVLPSLVSGRIYVVDTQKNPRAPSLHKVVEPADIVQKTRLSYPHTAHSLASGDILXSCLGDKDGNAXGNGILLLDSKFXVKGRREKTSSSPAFGYDFGY 687
            C   GP Y TPL+ M GPRE+ +Y+ C+Y  T  +KPDYL TVD +P S ++ KVIHRLP+P + DELHHSGWN+CSSC+ D S +R  L+LPSL+S RIYVVD   +PRAP LHK VEP D+  K  L+ PHT+H L SG I+ S +GD  GN  G  +LL    F V G  E+   +  FGYDF Y
Sbjct:    5 CSGCGPGYKTPLDAMKGPREEIVYLPCIYRNTDIQKPDYLATVDINPQSPNFCKVIHRLPMPNLKDELHHSGWNACSSCFDDPSKRRNRLILPSLISSRIYVVDVGTDPRAPRLHKTVEPTDLFWKCGLANPHTSHCLGSGQIMISTMGDPSGNGKGGFVLLDGETFEVIGNWEQPGDAAPFGYDFWY 192          
The following BLAST results are available for this feature:
BLAST of EY728536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SBP_ARATH1.466e-8067.46Putative selenium-binding protein OS=Arabidopsis t... [more]
SBP1_MOUSE1.620e-5855.85Selenium-binding protein 1 OS=Mus musculus GN=Sele... [more]
SBP2_MOUSE3.610e-5855.32Selenium-binding protein 2 OS=Mus musculus GN=Sele... [more]
SBP1_RAT3.610e-5856.38Selenium-binding protein 1 OS=Rattus norvegicus GN... [more]
SBP1_HUMAN4.714e-5856.38Selenium-binding protein 1 OS=Homo sapiens GN=SELE... [more]
SBP1A_XENLA1.791e-5755.85Selenium-binding protein 1-A OS=Xenopus laevis GN=... [more]
SBP1_BOVIN3.056e-5756.38Selenium-binding protein 1 OS=Bos taurus GN=SELENB... [more]
SBP1_PONAB8.891e-5755.85Selenium-binding protein 1 OS=Pongo abelii GN=SELE... [more]
SBP1B_XENLA7.527e-5654.26Selenium-binding protein 1-B OS=Xenopus laevis GN=... [more]
SBP1_DANRE3.735e-5553.72Selenium-binding protein 1 OS=Danio rerio GN=selen... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-005-B11-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728536 ID=EY728536; Name=EY728536; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGCTTGATCTTTCTTCAAAGTCTTTGTGTTGTTCTGTCTGT
GTTTCATTTCTTGTAAGAAATGGCAACTGATACTGTGGTGGCTGAACACC
GGTCGAGCAATAATGGGCATGGTTGCTGCGCGAAAGGGCCTGTGTATGCA
ACTCCACTCGAAACCATGTCTGGTCCTAGAGAGAAACATCTCTATGTCAC
TTGTCTTTACACTGGTACTGGAAGAGAGAAGCCTGATTACCTACCGACAG
TGGATGCGGATCCTAGCTCTTCTTCTTATTCAAAAGTTATTCATCGGCTC
CCTGTGCCATACATTGGTGATGAACTACATCATTCGGGATGGAATTCATG
TAGCTCATGCTATGGAGATACATCTGCTCAACGGCGTTTTCTTGTCTTGC
CTTCTTTGGTATCTGGTCGTATATACGTAGTTGACACACAAAAAAATCCA
AGGGCTCCCTCTTTGCATAAAGTTGTTGAGCCTGCAGATATTGTACAGAA
GACACGATTATCTTATCCTCACACGGCTCATAGCCTTGCTTCTGGTGATA
TCCTGNTGTCATGCCTTGGAGATAAAGATGGAAATGCTGANGGAAATGGA
ATTCTTCTTCTTGACTCAAAATTCNATGTGAAAGGAAGAAGGGAAAAAAC
AAGTTCAAGTCCTGCTTTCGGGTATGATTTCGGGTACCACCTCGACCCCA
AAAAATGATAACTCATCATGGGGAACACCCTGGCTTTCACAAAGGCTTCA
ACTTCANCATGTCTCTGATGGTCTTTATGGAGGATCTGTTTGTGTCGCTG
CCGGATGTGAATGAAACAAATTAATCTGGGTATAAGGCCCATACCCTGAA
ATAAGGTCTGCCTGACCCCTAAAATAAGGTTGGAAGTGTGCTT
back to top