EY728484

Overview
NameEY728484
Unique NameEY728484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728484 vs. ExPASy Swiss-Prot
Match: ALCA_BORPE (Alcaligin biosynthesis enzyme OS=Bordetella pertussis GN=alcA PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 3.765e-88
Identity = 153/199 (76.88%), Postives = 176/199 (88.44%), Query Frame = -3
Query:    3 RAVRDDPETDTYLVTGQHSINGERFMVRCRKLVLGLGSQPLLPACCDRREAPYVHSAEYLRHKEALQRRQSVTIVGSGQSAAEVFHDLLRDSDEHDYSLTWITRSPRFFQMENTKLTLELISPDYTNYFYDLPEARRRQILAEQSSLYKGINASLINQIYDLLDEKIHNGDRRYTLLTNAELRASRYDRHAARYHLEFR 599
            + V  DPE+ +YLVTGQH+++G+RFM RCRKLVLGLGSQP LPACCDRR AP++HSA+YLRHK  LQ R S+TIVGSGQSAAEVFHDLLR+S  HDYSL WITRSPRFFQMENTKLTLELISPDYT YF+DLPEARR++IL +Q+SLYKGINASLINQIYDLLDEK+H+GD RYTLLTN+ELRA RYD    R+ L+F+
Sbjct:  121 QGVLHDPESHSYLVTGQHTMSGQRFMFRCRKLVLGLGSQPYLPACCDRRAAPFIHSADYLRHKYELQGRASITIVGSGQSAAEVFHDLLRESGRHDYSLAWITRSPRFFQMENTKLTLELISPDYTEYFHDLPEARRQEILTQQNSLYKGINASLINQIYDLLDEKVHDGDNRYTLLTNSELRACRYDPLQERFQLDFQ 319          

HSP 2 Score: 24.6386 bits (52), Expect = 3.765e-88
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = -2
Query:  598 VAAPLPNLRFTRDVQ 642
            VAA LPNLRF  DVQ
Sbjct:  107 VAARLPNLRFGCDVQ 121          
BLAST of EY728484 vs. ExPASy Swiss-Prot
Match: ALCA_BORPA (Alcaligin biosynthesis enzyme OS=Bordetella parapertussis GN=alcA PE=3 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 3.765e-88
Identity = 153/199 (76.88%), Postives = 176/199 (88.44%), Query Frame = -3
Query:    3 RAVRDDPETDTYLVTGQHSINGERFMVRCRKLVLGLGSQPLLPACCDRREAPYVHSAEYLRHKEALQRRQSVTIVGSGQSAAEVFHDLLRDSDEHDYSLTWITRSPRFFQMENTKLTLELISPDYTNYFYDLPEARRRQILAEQSSLYKGINASLINQIYDLLDEKIHNGDRRYTLLTNAELRASRYDRHAARYHLEFR 599
            + V  DPE+ +YLVTGQH+++G+RFM RCRKLVLGLGSQP LPACCDRR AP++HSA+YLRHK  LQ R S+TIVGSGQSAAEVFHDLLR+S  HDYSL WITRSPRFFQMENTKLTLELISPDYT YF+DLPEARR++IL +Q+SLYKGINASLINQIYDLLDEK+H+GD RYTLLTN+ELRA RYD    R+ L+F+
Sbjct:  121 QGVLHDPESHSYLVTGQHTMSGQRFMFRCRKLVLGLGSQPYLPACCDRRAAPFIHSADYLRHKYELQGRASITIVGSGQSAAEVFHDLLRESGRHDYSLAWITRSPRFFQMENTKLTLELISPDYTEYFHDLPEARRQEILTQQNSLYKGINASLINQIYDLLDEKVHDGDNRYTLLTNSELRACRYDPLQERFQLDFQ 319          

HSP 2 Score: 24.6386 bits (52), Expect = 3.765e-88
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = -2
Query:  598 VAAPLPNLRFTRDVQ 642
            VAA LPNLRF  DVQ
Sbjct:  107 VAARLPNLRFGCDVQ 121          
BLAST of EY728484 vs. ExPASy Swiss-Prot
Match: ALCA_BORBR (Alcaligin biosynthesis enzyme OS=Bordetella bronchiseptica GN=alcA PE=3 SV=2)

HSP 1 Score: 322.398 bits (825), Expect = 3.765e-88
Identity = 153/199 (76.88%), Postives = 176/199 (88.44%), Query Frame = -3
Query:    3 RAVRDDPETDTYLVTGQHSINGERFMVRCRKLVLGLGSQPLLPACCDRREAPYVHSAEYLRHKEALQRRQSVTIVGSGQSAAEVFHDLLRDSDEHDYSLTWITRSPRFFQMENTKLTLELISPDYTNYFYDLPEARRRQILAEQSSLYKGINASLINQIYDLLDEKIHNGDRRYTLLTNAELRASRYDRHAARYHLEFR 599
            + V  DPE+ +YLVTGQH+++G+RFM RCRKLVLGLGSQP LPACCDRR AP++HSA+YLRHK  LQ R S+TIVGSGQSAAEVFHDLLR+S  HDYSL WITRSPRFFQMENTKLTLELISPDYT YF+DLPEARR++IL +Q+SLYKGINASLINQIYDLLDEK+H+GD RYTLLTN+ELRA RYD    R+ L+F+
Sbjct:  121 QGVLHDPESHSYLVTGQHTMSGQRFMFRCRKLVLGLGSQPYLPACCDRRAAPFIHSADYLRHKYELQGRASITIVGSGQSAAEVFHDLLRESGRHDYSLAWITRSPRFFQMENTKLTLELISPDYTEYFHDLPEARRQEILTQQNSLYKGINASLINQIYDLLDEKVHDGDNRYTLLTNSELRACRYDPLQERFQLDFQ 319          

HSP 2 Score: 24.6386 bits (52), Expect = 3.765e-88
Identity = 12/15 (80.00%), Postives = 12/15 (80.00%), Query Frame = -2
Query:  598 VAAPLPNLRFTRDVQ 642
            VAA LPNLRF  DVQ
Sbjct:  107 VAARLPNLRFGCDVQ 121          
BLAST of EY728484 vs. ExPASy Swiss-Prot
Match: RHBE_RHIME (Rhizobactin siderophore biosynthesis protein rhbE OS=Rhizobium meliloti GN=rhbE PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.927e-27
Identity = 68/173 (39.31%), Postives = 106/173 (61.27%), Query Frame = -3
Query:   90 VRDDPETDTYLVTGQHSINGERFMVRCRKLVLGLGSQPLLPACCDRRE-APYVHSAEYLRHKEALQRRQSVTIVGSGQSAAE----VFHDLLRDSDEHDYSLTWITRSPRFFQMENTKLTLELISPDYTNYFYDLPEARRRQILAEQSSLYKGINASLINQIYDLLDEKIHNG 593
            V  +  +D+++V  + S +G +   R R + +G+G+ P LP     +  AP +HS+E+ R +  L +R+ VT++GSGQSAAE    + +DL  +      S+ WITRS  FF ME +KL LE  +PDY  +F+ +   RRR+I+A+Q  LYKGI+ S I +I+DL+ E+   G
Sbjct:  121 VAHESASDSFIVESR-SASGGKQQYRSRNIAIGVGTAPFLPKWAQIKTLAPLMHSSEFGRRRLELSKRRRVTVIGSGQSAAECVLALLNDLTPEMVAAGASIQWITRSAGFFPMEYSKLGLEYFTPDYMRHFHRIAPVRRREIVADQGLLYKGISFSTIGEIFDLMYERSVGG 292          
BLAST of EY728484 vs. ExPASy Swiss-Prot
Match: PVDA_BURCE (L-ornithine 5-monooxygenase OS=Burkholderia cepacia GN=pvdA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.178e-12
Identity = 57/188 (30.32%), Postives = 93/188 (49.47%), Query Frame = -3
Query:   45 DDPETDTYLVTGQHSINGERFMVRCRKLVLGLGSQPLLP-ACCDRREAPYVHSAEYLRHKEALQ-----RRQSVTIVGSGQSAAEVFHDLLRDSDEHDYSLTWITRSPRFFQMENTKLTLELISPDYTNYFYDLPEARRRQILAE-QSSLYKGINASLINQIYDLLDEKIHNGDRRYTLLTNAELRAS 587
            D    D   V  + +   ER  V  R L +G+G  P +P A         +HS+ YL   + L       R+ V ++G+GQSAAEVF DL R     D +L  + R+      +++    E+ SP++T+  Y  P+  RR +L   + + Y  ++  LI QIY++L  +  +G  R+ LL N+ + A+
Sbjct:  134 DGARIDALRVLSRDAAGHERQRVT-RALSVGVGGTPAIPDAFAALGRDRVIHSSSYLTDIDRLVASPDGERRRVAVIGAGQSAAEVFIDLARRFPHVDANL--VMRAGALKPADDSPFVNEIFSPEFTDVVYAQPQDARRALLERYRDTNYAVVDRPLIEQIYEMLYLQRIDGTPRHALLANSAIEAA 318          
BLAST of EY728484 vs. ExPASy Swiss-Prot
Match: IUCD_ECOLX (L-lysine 6-monooxygenase OS=Escherichia coli GN=iucD PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.974e-12
Identity = 44/139 (31.65%), Postives = 65/139 (46.76%), Query Frame = -3
Query:  120 GERFMVRCRKLVLGLGSQPLLPACCDRREAPYVHSAEYLRHKEALQRRQSVTIVGSGQSAAEVFHDLLRDSDEHDYSLTWITRSPRFFQMENTKLTLELISPDYTNYFYDLPEARRRQILAEQSSLYKGINASLINQIY 536
            GE F    R + LG G QP LP C         H++E    +  L  ++ +T+VG GQS A++F + LR        + W++R   F  ++      E  +P+Y + F  L E  R Q+L EQ     GI A  +  IY
Sbjct:  138 GEYF---ARNICLGTGKQPYLPPCVKHMTQSCFHASEMNLRRPDLSGKR-ITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRNNFNALDEAAFADEYFTPEYISGFSGLEEDIRHQLLDEQKMTSDGITADSLLTIY 272          
The following BLAST results are available for this feature:
BLAST of EY728484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ALCA_BORPE3.765e-8876.88Alcaligin biosynthesis enzyme OS=Bordetella pertus... [more]
ALCA_BORPA3.765e-8876.88Alcaligin biosynthesis enzyme OS=Bordetella parape... [more]
ALCA_BORBR3.765e-8876.88Alcaligin biosynthesis enzyme OS=Bordetella bronch... [more]
RHBE_RHIME4.927e-2739.31Rhizobactin siderophore biosynthesis protein rhbE ... [more]
PVDA_BURCE1.178e-1230.32L-ornithine 5-monooxygenase OS=Burkholderia cepaci... [more]
IUCD_ECOLX9.974e-1231.65L-lysine 6-monooxygenase OS=Escherichia coli GN=iu... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-004-D05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728484 ID=EY728484; Name=EY728484; organism=Citrus sinensis; type=EST; length=823bp
TGGCGGAACTCCAGGTGGTAGCGTGCAGCGTGGCGGTCGTAGCGGCTGGC
GCGCAGTTCGGCGTTGGTGAGCAGCGTGTAGCGGCGGTCGCCGTTGTGGA
TCTTCTCGTCCAGCAGGTCGTAGATCTGGTTGATGAGCGAGGCGTTGATG
CCCTTGTACAGGCTGCTCTGTTCGGCCAGGATCTGGCGGCGGCGCGCTTC
GGGCAGGTCGTAGAAGTAGTTGGTGTAGTCCGGCGAAATCAGTTCCAGCG
TGAGCTTGGTGTTCTCCATCTGGAAAAAGCGCGGCGAGCGCGTGATCCAG
GTGAGGCTGTAGTCGTGCTCGTCGCTGTCGCGCAGCAGGTCGTGGAAGAC
CTCGGCCGCGCTCTGGCCGCTGCCGACGATGGTGACCGACTGCCGGCGCT
GCAACGCCTCCTTGTGGCGCAGGTACTCGGCGCTGTGCACATAGGGCGCC
TCGCGCCGGTCGCAGCAGGCCGGCAGCAACGGTTGCGAGCCCAGGCCCAG
CACCAGCTTGCGGCAGCGGACCATGAAGCGCTCGCCATTGATGCTGTGCT
GGCCGGTGACCAGGTAGGTGTCCGTCTCGGGATCGTCCCGCACGGCTCTG
CACGTCCCTGGTGAAGCGCAGGTTGGGCAGGGGCGCCGCGACCCCGACCA
ATCCCGGCCGGAGCCGGCGCCCGCCCGGTGGGCGGCTCCGAAGAGNAGGG
AAAGGAGAANGAGGGAGGGGAGGGGGGAAAGAAAGGGAAAGGGNNGGGAG
GGAGAAGGGGGNAGGGGNGGGANAGGGGAGGAGAGGAGGNAGGAGGGGGG
CGCGGCAGCGGCCGCCCGCCCCC
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