EY728423

Overview
NameEY728423
Unique NameEY728423
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY728423_ssr136 microsatellite EY728423_ssr136:136..145. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ANR28_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Homo sapiens GN=ANKRD28 PE=1 SV=4)

HSP 1 Score: 79.7221 bits (195), Expect = 2.287e-14
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 2
Query:  290 SALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAARSRGPECVHIWVDSGALVCA 706
            S LH++A +G  + LE+L+   ++ D  N   +TPL LAA  G + CV  L+  GA+IL+ D +  RT +H AA  GH++C++ ++  A+             V+I+DG G TP  L+  +   +CV+  ++ GA V A
Sbjct:  585 SPLHLAAYHGHHQALEVLVQSLLDLDVRNSSGRTPLDLAAFKGHVECVDVLINQGASILVKDYILKRTPIHAAATNGHSECLRLLIGNAEPQ---------NAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGANVDA 714          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ANR28_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus GN=Ankrd28 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.987e-14
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 2
Query:  290 SALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAARSRGPECVHIWVDSGALVCA 706
            S LH++A +G  + LE+L+   ++ D  N   +TPL LAA  G + CV  L+  GA+IL+ D +  RT +H AA  GH++C++ ++  A+             V+I+DG G TP  L+  +   +CV+  ++ GA V A
Sbjct:  552 SPLHLAAYHGHHQALEVLVQSLLDLDVRNSSGRTPLDLAAFKGHVECVDVLINQGASILVKDYVLKRTPIHAAATNGHSECLRLLIGNAEPQ---------NAVDIQDGNGQTPLMLSVLNGHTDCVYSLLNKGANVDA 681          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ASB3_BOVIN (Ankyrin repeat and SOCS box protein 3 OS=Bos taurus GN=ASB3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.901e-14
Identity = 55/187 (29.41%), Postives = 94/187 (50.27%), Query Frame = 2
Query:  200 AVQHGDIEFVNDLLEKDSSLLH-QTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQS---------SPIAVSWGYARF------------VNIRDGRGATP*HLAARSRGPECVHIWVDSGA 694
            A  H  +E +  L+  DSS  + +T  ++   ALH++A+ G  +I++ILL    +P+A    + TPL LA  +G+I  ++ LL  GAN+    S+ G   LH A++ G+A+ ++ +L    +         +P+ V+  Y +             VN +    ATP  +AA+    ECV + + SGA
Sbjct:   50 ASYHNSVECLRMLIRADSSENYIKTKTFEGFCALHLAASQGHWKIIQILLEAGADPNATTLEETTPLFLAVENGQIDVLRLLLRYGANVNGSHSMCGWNALHQASFQGNAEIIKLLLKKGANKECQDDFGITPLFVAAQYGKLESLSILISSGADVNCQALDKATPLFIAAQEGHTECVELLLSSGA 236          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ANR44_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.529e-13
Identity = 50/170 (29.41%), Postives = 85/170 (50.00%), Query Frame = 2
Query:  200 AVQHGDIEFVNDLLEKDSSLLHQTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAARSRGPECVHIWVDSGALVCAS 709
            A  +G  + +  LLEK+S++  ++      S LH++A NG  + LE+LL   V+ D  +   +T L LAA  G   CV+ L+  GA++ + D++  RT LH +   GH  C++ +L  A +             ++ D +G TP  LA      + V + ++  A V A+
Sbjct:  539 AAAYGHRQCLELLLEKNSNMFEESDSSATKSPLHLAAYNGHHQALEVLLQSLVDLDIKDEKGRTALDLAAFKGHAECVEALISQGASVTVKDNVTKRTPLHASVINGHTPCLRLLLEVADNP------------DVTDAKGQTPLMLAVAYGHIDAVSLLLEKEASVDAA 696          

HSP 2 Score: 74.7146 bits (182), Expect = 7.357e-13
Identity = 56/153 (36.60%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  188 ALFTAVQHGDIEFVNDLLEKDSSLLHQTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAA 646
            AL  A   G  E V  L+ + +S+  +  V  R + LH S  NG    L +LL  + NPD  +   QTPLMLA  +G I  V  LLE  A++   D L G T LH     GH +CVQ +L    S            +  +D RG TP H AA
Sbjct:  603 ALDLAAFKGHAECVEALISQGASVTVKDNVTKR-TPLHASVINGHTPCLRLLLEVADNPDVTDAKGQTPLMLAVAYGHIDAVSLLLEKEASVDAADLL-GCTALHRGIMTGHEECVQMLLEKEVS------------ILCKDARGRTPLHFAA 741          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ANR44_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.639e-12
Identity = 50/174 (28.74%), Postives = 88/174 (50.57%), Query Frame = 2
Query:  185 HALFTAVQHGDIEFVNDLLEKDSSLLHQTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAARSRGPECVHIWVDSGALVCA 706
            +++  A  +G  + +  LLE+ ++   ++      S LH++A NG  + LE+LL   V+ D  +   +T L LAA  G   CV+ L+  GA+I + D++  RT LH +   GH  C++ +L  A +  +         V+++D +G TP  LA      + V + ++  A V A
Sbjct:  534 NSIHYAAAYGHRQCLELLLERTNTGFEESDGGALKSPLHLAAYNGHHQALEVLLQSLVDLDIRDEKGRTALYLAAFKGHTECVEALVNQGASIFVKDNVTKRTPLHASVINGHTLCLRLLLETADNPEV---------VDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDA 698          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ASB3_MOUSE (Ankyrin repeat and SOCS box protein 3 OS=Mus musculus GN=Asb3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.141e-12
Identity = 52/187 (27.81%), Postives = 90/187 (48.13%), Query Frame = 2
Query:  200 AVQHGDIEFVNDLLEKDSSLLH-QTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQS---------SPIAVSWGYARF------------VNIRDGRGATP*HLAARSRGPECVHIWVDSGA 694
            A  H  +E +  L+  DSS  + +   ++   ALH++ + G  +I +ILL    +P+     + TPL LA   G+I  +K LL+ GAN+    S++G   LH A++ G+A+ ++ +L              +P+ V+  Y +             VN +    ATP  +AA+    +CV + + SGA
Sbjct:   50 AAYHNAVECLQMLIHTDSSENYIKAKTFEGFCALHLAVSQGHWKITQILLEAGADPNETTLEETTPLFLAVESGRIDVLKLLLQHGANVNGSHSMSGWNSLHQASFQGNAETIKLLLKQGADRECQDDFGITPLFVAAQYGKLESMSILISSGANVNCQALDKATPLFIAAQEGHTKCVELLLSSGA 236          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ANR44_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 2.796e-12
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 2
Query:  185 HALFTAVQHGDIEFVNDLLEKDSSLLHQTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAARSRGPECVHIWVDSGALV 700
            +++  A  +G  + +  LLE+ +S   ++      S LH++A NG  + LE+LL   V+ D  +   +T L LAA  G   CV+ L+  GA+I + D++  RT LH +   GH  C++ +L  A +            V+++D +G TP  LA      + V + ++  A V
Sbjct:  534 NSIHYAAAYGHRQCLELLLERTNSGFEESDSGATKSPLHLAAYNGHHQALEVLLQSLVDLDIRDEKGRTALDLAAFKGHTECVEALINQGASIFVKDNVTKRTPLHASVINGHTLCLRLLLEIADN---------PEAVDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANV 696          

HSP 2 Score: 72.7886 bits (177), Expect = 2.796e-12
Identity = 58/156 (37.18%), Postives = 74/156 (47.44%), Query Frame = 2
Query:  188 ALFTAVQHGDIEFVNDLLEKDSSLLHQTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVN---RYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAA 646
            AL  A   G  E V  L+ + +S+  +  V  R + LH S  NG    L +LL  + NP+AV+      QTPLMLA  +G I  V  LLE  AN+   D L G T LH     GH +CVQ +L    S            +  +D RG TP H AA
Sbjct:  603 ALDLAAFKGHTECVEALINQGASIFVKDNVTKR-TPLHASVINGHTLCLRLLLEIADNPEAVDVKDAKGQTPLMLAVAYGHIDAVSLLLEKEANVDTVDIL-GCTALHRGIMTGHEECVQMLLEQEVS------------ILCKDSRGRTPLHYAA 744          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ASB3_HUMAN (Ankyrin repeat and SOCS box protein 3 OS=Homo sapiens GN=ASB3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12
Identity = 52/187 (27.81%), Postives = 93/187 (49.73%), Query Frame = 2
Query:  200 AVQHGDIEFVNDLLEKDSSLLH-QTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQS---------SPIAVSWGYARF------------VNIRDGRGATP*HLAARSRGPECVHIWVDSGA 694
            A  H  +E +  L+  DSS  + +   ++   ALH++A+ G  +I++ILL    +P+A    + TPL LA  +G+I  ++ LL+ GAN+    S+ G   LH A++  +A+ ++ +L    +         +P+ V+  Y +             VN +    ATP  +AA+    +CV + + SGA
Sbjct:   50 AAYHNSVECLQMLINADSSENYIKMKTFEGFCALHLAASQGHWKIVQILLEAGADPNATTLEETTPLFLAVENGQIDVLRLLLQHGANVNGSHSMCGWNSLHQASFQENAEIIKLLLRKGANKECQDDFGITPLFVAAQYGKLESLSILISSGANVNCQALDKATPLFIAAQEGHTKCVELLLSSGA 236          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: Y3236_ARATH (Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 52/170 (30.59%), Postives = 77/170 (45.29%), Query Frame = 2
Query:  182 EHALFTAVQHGDIEFVNDLLEKDSSLLHQTTVYDRHSALHISAANGQIEILEILLNRSVN-PDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAARSRGPECVHIWVDS 688
            E ALFTA   G ++ V +LL+  S           +  LHI+A  G   I+E+LL+              TPL+ AAM G    V +LL    N+L     N +  LH AA  GH + ++A+LS             AR +   D +G T  H+A + +  E V + +D+
Sbjct:  130 ETALFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIVEVLLDHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQ--------LARRI---DKKGQTALHMAVKGQSSEVVKLLLDA 288          
BLAST of EY728423 vs. ExPASy Swiss-Prot
Match: ANR52_DANRE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Danio rerio GN=ankrd52 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12
Identity = 51/176 (28.98%), Postives = 81/176 (46.02%), Query Frame = 2
Query:  167 CGASYEHALFTAVQHGDIEFVNDLLEKDSSLLHQTTVYDRHSALHISAANGQIEILEILLNRSVNPDAVNRYKQTPLMLAAMHGKIYCVKRLLEAGANILMFDSLNGRTCLHYAAYYGHADCVQAILSAAQSSPIAVSWGYARFVNIRDGRGATP*HLAARSRGPECVHIWVDSGA 694
            C      A+  A  HG+ + +  LLE   + L         S LH++  +G  E + +L+   V  D  +   ++ L LA+  G   CV+ LL   A+ L+ +  +    LH AA  GH++C++ +L          S G A  VN+ D  G TP  LA      +CVH+ ++ GA
Sbjct:  540 CNTKGYSAVHYAAAHGNKQNLELLLEMCFNTLGDKESNGSISPLHLAVESGHWECVTVLIESGVCVDVCDPVGRSVLYLASQRGHSRCVELLLSQSASCLLAEHRSKWGPLHVAAANGHSECLRMLL---------CSEGGADLVNVTDAEGQTPLMLAVLGGHTDCVHLLLERGA 706          
The following BLAST results are available for this feature:
BLAST of EY728423 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ANR28_HUMAN2.287e-1434.53Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR28_MOUSE2.987e-1434.53Serine/threonine-protein phosphatase 6 regulatory ... [more]
ASB3_BOVIN3.901e-1429.41Ankyrin repeat and SOCS box protein 3 OS=Bos tauru... [more]
ANR44_CHICK2.529e-1329.41Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR44_MOUSE1.639e-1228.74Serine/threonine-protein phosphatase 6 regulatory ... [more]
ASB3_MOUSE2.141e-1227.81Ankyrin repeat and SOCS box protein 3 OS=Mus muscu... [more]
ANR44_HUMAN2.796e-1229.07Serine/threonine-protein phosphatase 6 regulatory ... [more]
ASB3_HUMAN3.651e-1227.81Ankyrin repeat and SOCS box protein 3 OS=Homo sapi... [more]
Y3236_ARATH4.769e-1230.59Ankyrin repeat-containing protein At3g12360 OS=Ara... [more]
ANR52_DANRE4.769e-1228.98Serine/threonine-protein phosphatase 6 regulatory ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-E07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728423 ID=EY728423; Name=EY728423; organism=Citrus sinensis; type=EST; length=857bp
CCACGCGTCCGGTCACCAGCACCACCTCTGGTTTATGGTGGCGCTTCACC
AAGAACCTATGGTGAAGTGCGCACCCCNTCTGAATCAAAAAAAAAAAAAA
AAAGAGAAAGAGAGAGACAGAGTTAAAGAGAGAGGGAGAGAGAGAGTGAT
GGGTCAGGGACTGAGTTGTGGAGCGAGTTATGAGCATGCTTTGTTCACCG
CTGTGCAGCATGGTGATATCGAGTTTGTTAATGATTTGTTAGAGAAAGAT
TCAAGTCTCTTACATCAAACCACTGTTTATGATCGCCACTCTGCTCTTCA
TATTTCTGCTGCCAATGGCCAGATCGAGATTTTGGAGATTTTGCTGAACC
GATCTGTGAATCCTGATGCGGTGAATCGTTACAAGCAGACTCCGCTTATG
CTGGCTGCAATGCATGGGAAGATCTATTGTGTTAAAAGGCTGCTTGAAGC
TGGAGCTAATATACTGATGTTTGATTCTCTCAATGGAAGAACTTGCTTGC
ATTATGCTGCTTACTACGGCCACGCCGATTGCGTTCAAGCCATTCTCTCT
GCTGCTCAGTCTAGTCCTATTGCCGTTTCTTGGGGATATGCGAGGTTTGT
GAACATTAGAGATGGAAGGGGAGCGACNCCGTGACACTTGGCTGCGCGTT
CAAGAGGGCCCGAATGTGTACATATTTGGGTAGATAGTGGTGCTCTTGTG
TGTGCTTCCAGCGGGGGATATGGTTGGCCCGGGAACATGCCTCGCCGTTG
AGAGGTAAAAGGGGGATCGATGGATGGATCGCGGGAGTGGGGGCTGGGGG
TGGAGATGCGCTTCGAAAAATGTCCGGGGAGGGGTGGGCAGGGCGGGGGG
TGAGGAA
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