EY728402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHC_TOBAC (Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 7.110e-59 Identity = 110/121 (90.91%), Postives = 118/121 (97.52%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVANDLRARL 374 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAW+RGLAHRA LDNN RLLDFTEKLEAAC+G VESGKMTKDLALIIHGSK++R+HYLNTEEFIDAVA++L+ARL Sbjct: 290 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIHGSKLSRDHYLNTEEFIDAVADELKARL 410
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHC_SOYBN (Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 2.702e-58 Identity = 109/122 (89.34%), Postives = 119/122 (97.54%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVANDLRARLS 377 LGLMTSVLVCPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD+NA+LLDFTEKLEAAC+G VE+GKMTKDLALI+HGSK++REHYLNTEEFIDAVA +L ARLS Sbjct: 291 LGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACIGVVEAGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELSARLS 412
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHC_SOLTU (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.861e-58 Identity = 111/122 (90.98%), Postives = 118/122 (96.72%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLAL-IIHGSKMTREHYLNTEEFIDAVANDLRARL 374 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAW+RGLAHRA LDNN RLLDFTEKLEAAC+G VESGKMTKDLAL IIHGSK++REHYLNTEEFIDAVA++L+ARL Sbjct: 290 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIIHGSKLSREHYLNTEEFIDAVADELKARL 411
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHP_MEDSA (Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.341e-57 Identity = 107/122 (87.70%), Postives = 118/122 (96.72%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVANDLRARLS 377 LGLMTSVLVCPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD+NA LLDFTEKLEAAC+G VESGKMTKDLALI+HGSK++REHYLNTEEFIDAVA +L+ ++S Sbjct: 311 LGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEKLEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKTKIS 432
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.119e-41 Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVANDLRARLS 377 LG+MTSVL+CPDGKT+EAEAAHGTVTRHYR+HQKG ETSTN IASIFAWSRGLAHRA+LDNN L F + LE C+ T+E+G MTKDLA I G + R YLNT EF+D + +L+A+L+ Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.119e-41 Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVANDLRARLS 377 LG+MTSVL+CPDGKT+EAEAAHGTVTRHYR+HQKG ETSTN IASIFAWSRGLAHRA+LDNN L F + LE C+ T+E+G MTKDLA I G + R YLNT EF+D + +L+A+L+ Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.489e-40 Identity = 82/123 (66.67%), Postives = 97/123 (78.86%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVANDLRARLS 377 LG+MTSVL+CPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAWSRGLAHRAKLDNN L F LE C+ T+E+G MTKDLA I G + R YLNT EF+D + +L+A+L+ Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.489e-40 Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVANDLRARLS 377 LG+MTSVL+CPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAWSRGLAHRAKLDNN L F + LE C+ T+E+G MTKDLA I G + R YLNT EF+D + +L+A+L+ Sbjct: 288 LGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFAKALEDVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHP_PIG (Isocitrate dehydrogenase [NADP], mitochondrial (Fragment) OS=Sus scrofa GN=IDH2 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.392e-40 Identity = 82/119 (68.91%), Postives = 92/119 (77.31%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHGSKMTR--EHYLNTEEFIDAVANDL 362 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG TSTN IASIFAW+RGL HR KLD N L+ F + LE CV TVESG MTKDLA IHG + EH+LNT +F+D + ++L Sbjct: 296 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNL 414
BLAST of EY728402 vs. ExPASy Swiss-Prot
Match: IDHP_BOVIN (Isocitrate dehydrogenase [NADP], mitochondrial OS=Bos taurus GN=IDH2 PE=1 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 7.392e-40 Identity = 82/119 (68.91%), Postives = 92/119 (77.31%), Query Frame = 3 Query: 12 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACVGTVESGKMTKDLALIIHGSKMTR--EHYLNTEEFIDAVANDL 362 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG TSTN IASIFAW+RGL HR KLD N L+ F + LE CV TVESG MTKDLA IHG + EH+LNT +F+D + ++L Sbjct: 327 LGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFLDTIKSNL 445 The following BLAST results are available for this feature:
BLAST of EY728402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728402 ID=EY728402; Name=EY728402; organism=Citrus sinensis; type=EST; length=645bpback to top |