EY728401
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF2P_ARATH (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana GN=At1g23400 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 1.683e-83 Identity = 134/192 (69.79%), Postives = 156/192 (81.25%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVDLDIAGDADGSGTPSDD---PSQGTIRSSPXMISLWE 589 EKTGG+II RVGG+VYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQE PEGLTK EA E R KGKSL PICKL+KNGVY++LV+DVR+AFE SSLVKV+C G+ SDYKK+GAKLKELVPCVLLSFDDEQILMWRG++WKS + + P + + + + D S PS++ + T SSP MISLW+ Sbjct: 268 EKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPGLEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSRFVDNPLIPSLSETNTTNELDPSDKPSEEQTVANPSTTISSPKMISLWQ 459 HSP 2 Score: 58.151 bits (139), Expect = 1.683e-83 Identity = 27/45 (60.00%), Postives = 36/45 (80.00%), Query Frame = 3 Query: 588 KRAIEFTKALVLDENYLGPDDLLKKVEEFEGISQGREHSYPALIL 722 +RA+E +KA++L+E LGPDDLLKKVEE EG S EH+Y A++L Sbjct: 459 QRALESSKAVILEELDLGPDDLLKKVEELEGTSLAAEHTYTAMVL 503
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF2P_ORYSJ (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0323300 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 4.453e-75 Identity = 125/193 (64.77%), Postives = 157/193 (81.35%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPXMISLW 586 EK+GGK+I RVGG+V+L+RGRNYN RTRP+YPLMLWKPA PVYPKLIQEAPEGLTK EADE+RR+GK LLPICKLAKNG+Y+ LVRDVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFD+EQILM+RGK+WKS YP+P + + ++ ++ D S +DD + +R P M LW Sbjct: 295 EKSGGKVIHRVGGVVFLYRGRNYNPRTRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEADEMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDNEQILMFRGKEWKSRYPKPLTLIPKIRKNNVPMSSDESSSDEATDDDDRLAVREVLRPKMFELW 487 HSP 2 Score: 39.6614 bits (91), Expect = 4.453e-75 Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 3 Query: 594 AIEFTKALVLDE---NYLGPDDLLKKVEEFEGISQGREHSYPALIL 722 AIE + AL+LD+ + L PD LL +VE+F SQ EHS+PA+++ Sbjct: 490 AIESSVALMLDDAEVDALTPDSLLTRVEDFSVTSQVVEHSFPAVLV 535
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF2P_MAIZE (CRS2-associated factor 2, chloroplastic OS=Zea mays GN=CAF2 PE=1 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.406e-73 Identity = 122/195 (62.56%), Postives = 156/195 (80.00%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPV---DLDIAGDADGSGTPSDDPSQGTIRS--SPXMISLWEA 592 EK+GGK+I RVGG+V+L+RGR+Y+ +TRP+YPLMLWKPA PVYPKLI+EAP+G TK EADE+RRKG+ LLPICKLAKNG+Y+TLV+DVR+AFEGS LVK++C+G++ SDYKK+GAKL++LVPCVLLSFDDEQILM RGK+WKS Y +P + V +L + + S SD +Q IR P M LW++ Sbjct: 299 EKSGGKVIHRVGGVVFLYRGRHYDPKTRPRYPLMLWKPATPVYPKLIKEAPDGFTKEEADEMRRKGRDLLPICKLAKNGIYITLVKDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDLVPCVLLSFDDEQILMHRGKEWKSRYSKPLTLIPKVPKNNLAMTSVMNSSDEVSDANTQVAIREVLRPKMFKLWKS 493 HSP 2 Score: 46.2098 bits (108), Expect = 1.406e-73 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 3 Query: 588 KRAIEFTKALVLDE---NYLGPDDLLKKVEEFEGISQGREHSYPALILVRGN 734 K A++ + AL+LD+ N L PD LL VEEF SQ EHS+PAL++ G+ Sbjct: 492 KSAVDSSLALLLDDAEANNLTPDSLLTLVEEFSVTSQAVEHSFPALLVTNGD 543
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF1P_ARATH (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana GN=At2g20020 PE=1 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 2.657e-58 Identity = 105/190 (55.26%), Postives = 145/190 (76.32%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPP---SFSNPVDLDIAGDADGSGTPSDDPSQGTIRSSPXMISL 583 EK GGK+I+R GG+++LFRGRNYN+RTRP++PLMLWKP APVYP+LIQ+ PEGLT+ EA +RRKG+ L+PICKL KNGVY LV++V+ AFE LV+++C+GM SD++K+GAKLK+LVPCVL+SF++EQIL+WRG++WKS P +++D A D + S + SQ T+ +P + S+ Sbjct: 308 EKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKGDILEDIEVDTALPEDDEPSVSPNQSQ-TMTQNPPLDSM 496
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF1P_ORYSJ (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0495900 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 7.235e-56 Identity = 102/170 (60.00%), Postives = 128/170 (75.29%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP--EPPSFSNPVDLDIAGDADGSGT 526 EK GGK+I GG+++LFRGRNYNYRTRP YPLMLWKPAAPVYP+L+++ P+GLT EA+++R++G+ L PICKL KNGVYL LV+ VR AFE LV+V+C G++ SD +K+GAKLK+LVPC LLSF+ E ILMWRG DWKS P E F D + GSG+ Sbjct: 250 EKVGGKVIHHQGGVIFLFRGRNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKLGKNGVYLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGNDWKSSLPPLEENDFKVASDQILNSKEAGSGS 419
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF1P_MAIZE (CRS2-associated factor 1, chloroplastic OS=Zea mays GN=CAF1 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.970e-53 Identity = 95/146 (65.07%), Postives = 114/146 (78.08%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYP 460 EK GGK+I R GG+++LFRGRNYNYRTRP +PLMLWKP APVYP+L+ + P GLT EA E+R +G L PICKL KNGVY LV VR AFE LV+V+C G++ SD +K+GAKLK+LVPC+LLSF+ E ILMWRG DWKS P Sbjct: 250 EKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFPLMLWKPVAPVYPRLVTKVPGGLTPDEATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCILLSFEFEHILMWRGSDWKSSLP 395
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF1M_ORYSJ (CRS2-associated factor 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0174900 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.121e-40 Identity = 79/141 (56.03%), Postives = 106/141 (75.18%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDW 445 +KTGG II R GG + L+RGR+YN + RP PLMLWKPA PVYP+LI+ EGLT E E+R+KG + + KLAKNG Y +LV VR+AF LV+++ KG+ SDY+K+G KL++LVPC+++SFD EQI++WRGKD+ Sbjct: 224 DKTGGLIIHRHGGQLILYRGRHYNPKKRPVIPLMLWKPAEPVYPRLIKTTIEGLTVEETKEMRKKGLYVPVLTKLAKNGYYASLVPMVRDAFLTDELVRIDSKGLPKSDYRKIGVKLRDLVPCIIVSFDKEQIIVWRGKDY 364
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF1M_ARATH (CRS2-associated factor 1, mitochondrial OS=Arabidopsis thaliana GN=At4g31010 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.338e-38 Identity = 76/164 (46.34%), Postives = 117/164 (71.34%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGKDWKSMYPEPPSFSNPVDLDIAGDAD 514 +KT G+++ + G + L+RGRNY+ + RP+ PLMLWKP PVYP+LI+ +GL+ E +R+KG ++ + KLAKNG Y +LV VR+AF S LV+++C G+ DYKK+GAKL++LVPC+L++FD EQ+++WRGKD+K E +S+ + + + D+D Sbjct: 226 DKTFGQVVSKHSGTLVLYRGRNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGYYGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKDYKPP-KEDDEYSSFIHRESSIDSD 388
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF2M_ORYSJ (CRS2-associated factor 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0188000 PE=2 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 5.209e-38 Identity = 72/139 (51.80%), Postives = 102/139 (73.38%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 439 +KTGGK+I+R ++ L+RGRNY+ + RPQ PLMLWKP AP+YP+L+Q +GLT + ELR G + P+ KL +NGVY+ +V VR AF+ +V+++C + +SD KK+G KL++LVPCV L F DEQI++WRGK Sbjct: 212 DKTGGKVIYRNINILILYRGRNYDPKQRPQIPLMLWKPLAPIYPRLVQNVADGLTFEKTKELRNTGLNSSPLMKLTRNGVYVNVVDRVREAFKTVEVVRLDCSHVGSSDCKKIGVKLRDLVPCVPLLFKDEQIILWRGK 350
BLAST of EY728401 vs. ExPASy Swiss-Prot
Match: CAF2M_ARATH (CRS2-associated factor 2, mitochondrial OS=Arabidopsis thaliana GN=At5g54890 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.049e-34 Identity = 66/139 (47.48%), Postives = 97/139 (69.78%), Query Frame = 2 Query: 23 EKTGGKIIFRVGGLVYLFRGRNYNYRTRPQYPLMLWKPAAPVYPKLIQEAPEGLTKHEADELRRKGKSLLPICKLAKNGVYLTLVRDVRNAFEGSSLVKVNCKGMHASDYKKLGAKLKELVPCVLLSFDDEQILMWRGK 439 EK+GGKI++R ++ L+RGRNY+ ++RP PLMLWKP P+YP+L++ +GL E E+R +G + KL +NGVY+ +V VR FE +V+++C + SD K++G KLKE+VPCV + F DEQI++WRGK Sbjct: 210 EKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLWKPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEEIVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348 The following BLAST results are available for this feature:
BLAST of EY728401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728401 ID=EY728401; Name=EY728401; organism=Citrus sinensis; type=EST; length=873bpback to top |