EY728398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: RH2_ARATH (DEAD-box ATP-dependent RNA helicase 2 OS=Arabidopsis thaliana GN=RH2 PE=2 SV=2) HSP 1 Score: 283.493 bits (724), Expect = 1.080e-75 Identity = 144/192 (75.00%), Postives = 164/192 (85.42%), Query Frame = 1 Query: 121 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 K+VFETT+G+E ITSF+ MGIK+D+LRG+Y+YGFEKPSAIQQRAVMPI++GRDVIAQAQSGTGKTSMIAL+VCQ VDTSSREVQALILSPTRELATQTEK I AIG NIQAHAC+GG SVGEDIRKLEHGVHVVSG PG VCDMIKR++ RTRAI L +L+E D+ML + F D+ DV R P C+ Sbjct: 22 KLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCL 213
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: IF4A3_NICPL (Eukaryotic initiation factor 4A-3 OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 1.080e-75 Identity = 143/182 (78.57%), Postives = 158/182 (86.81%), Query Frame = 1 Query: 121 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R 666 ++VFET++GVE I SF MGIKDDLLRG+YQYGFEKPSAIQQRAV+PII GRDVIAQAQSGTGKTSMIALTVCQ VDT S EVQALILSPTRELA QTEKVILAIGD+IN+QAHAC+GGKSVGEDIRKLEHGV VVSG PG VCDMIKR+ RTR I L +L+E D+ML + F D+ DV R Sbjct: 5 RLVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACIGGKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEMLSRGFKDQIYDVYR 186
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: RH2_ORYSJ (DEAD-box ATP-dependent RNA helicase 2 OS=Oryza sativa subsp. japonica GN=Os01g0639100 PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 7.000e-75 Identity = 142/191 (74.35%), Postives = 161/191 (84.29%), Query Frame = 1 Query: 124 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 + FET+ GVE I+SFD MGI+DDLLRGIY YGFEKPSAIQQRAV+PII GRDVIAQAQSGTGKTSMI+L+VCQ VDT+ REVQALILSPTRELA QTE+V+LAIGDFINIQ HAC+GGKS+GEDIRKLEHGVHVVSG PG VCDMIKR+ RTRAI L +L+E D+ML + F D+ DV R P C+ Sbjct: 19 LTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCL 209
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: RH34_ORYSJ (DEAD-box ATP-dependent RNA helicase 34 OS=Oryza sativa subsp. japonica GN=Os03g0566800 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.537e-74 Identity = 140/191 (73.30%), Postives = 161/191 (84.29%), Query Frame = 1 Query: 124 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 + FET+ GVE I+SFD MGI++DLLRGIY YGFEKPSAIQQRAV+PII GRDVIAQAQSGTGKTSMI+L+VCQ VDT+ REVQALILSPTRELA QTE+V+LAIGD+INIQ HAC+GGKS+GEDIRKLEHGVHVVSG PG VCDMIKR+ RTRAI L +L+E D+ML + F D+ DV R P C+ Sbjct: 19 LTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCL 209
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: RH34_ARATH (DEAD-box ATP-dependent RNA helicase 34 OS=Arabidopsis thaliana GN=RH34 PE=2 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 3.603e-63 Identity = 121/191 (63.35%), Postives = 152/191 (79.58%), Query Frame = 1 Query: 124 MVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 +VFETT+G++ I SFD MG+ D +LRG+Y YG++KPS IQQRA++PI+KGRDVIAQAQSGTGKTSMIA++VCQ V+ SSR+VQ L+LSP+RELA+QTEK I AIG NIQAHAC+GGKS+GEDI+KLE GVH VSG PG V DMIKR + +T+A+ L VL+E D+ML + D+ DV R P C+ Sbjct: 10 LVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCL 200
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: FAL1_USTMA (ATP-dependent RNA helicase FAL1 OS=Ustilago maydis GN=FAL1 PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.159e-61 Identity = 111/182 (60.99%), Postives = 149/182 (81.87%), Query Frame = 1 Query: 121 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R 666 K+ FE++E V+ T+FDAMG+K+DLLRGIY Y FEKPSAIQQRA++PII+GRDVIAQAQSGTGKT+ ++++ Q++DT+ RE QAL+LSPTRELA Q + V+LA+GD++N+Q HAC+GG SVGEDIRKL++G H+VSG PG V DMI+R+ RT+ I + +L+E D++L F D+ DV R Sbjct: 11 KLAFESSEHVKVATTFDAMGLKEDLLRGIYAYNFEKPSAIQQRAILPIIRGRDVIAQAQSGTGKTATFSISMLQSIDTTLRETQALVLSPTRELAIQIQSVVLALGDYLNVQCHACIGGTSVGEDIRKLDYGQHIVSGTPGRVYDMIRRRHLRTKNIKMLILDESDELLNMGFKDQIYDVYR 192
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.186e-60 Identity = 114/192 (59.38%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 121 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ ++V Q +D RE QALIL+PTRELA Q +KV+LA+GD++N+Q HAC+GG +VGEDIRKL++G HVV+G PG V DMI+R++ RTRAI + VL+E D+ML + F ++ DV R P + C+ Sbjct: 29 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCL 220
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.186e-60 Identity = 114/192 (59.38%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 121 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ ++V Q +D RE QALIL+PTRELA Q +KV+LA+GD++N+Q HAC+GG +VGEDIRKL++G HVV+G PG V DMI+R++ RTRAI + VL+E D+ML + F ++ DV R P + C+ Sbjct: 20 KIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCL 211
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 2.186e-60 Identity = 114/192 (59.38%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 121 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ ++V Q +D RE QALIL+PTRELA Q +KV+LA+GD++N+Q HAC+GG +VGEDIRKL++G HVV+G PG V DMI+R++ RTRAI + VL+E D+ML + F ++ DV R P + C+ Sbjct: 29 KVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCL 220
BLAST of EY728398 vs. ExPASy Swiss-Prot
Match: IF4A3_SALSA (Eukaryotic initiation factor 4A-III OS=Salmo salar GN=eif4a3 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 4.870e-60 Identity = 113/192 (58.85%), Postives = 150/192 (78.12%), Query Frame = 1 Query: 121 KMVFETTEGVEAITSFDAMGIKDDLLRGIYQYGFEKPSAIQQRAVMPIIKGRDVIAQAQSGTGKTSMIALTVCQTVDTSSREVQALILSPTRELATQTEKVILAIGDFINIQAHACVGGKSVGEDIRKLEHGVHVVSGIPGTVCDMIKRKAWRTRAITLWVLEECDDMLEQRFXDRXCDV*R*HPAGSAGCV 696 K+ FET+E V+ +FD MG+++DLLRGIY YGFEKPSAIQQRA+ IIKGRDVIAQ+QSGTGKT+ ++V Q +D RE QALIL+PTRELA Q +KV+LA+GD++N+Q H+C+GG +VGEDIRKL++G HVV+G PG V DMI+R++ RTRAI + VL+E D+ML + F ++ DV R P + C+ Sbjct: 20 KIEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCL 211 The following BLAST results are available for this feature:
BLAST of EY728398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728398 ID=EY728398; Name=EY728398; organism=Citrus sinensis; type=EST; length=875bpback to top |