EY728397

Overview
NameEY728397
Unique NameEY728397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 296.204 bits (757), Expect = 1.695e-86
Identity = 147/157 (93.63%), Postives = 151/157 (96.18%), Query Frame = 1
Query:  118 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQETMLL 588
            FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELG+DYDEQ+  ++
Sbjct:    9 FAPSVSSTTNKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVV 165          

HSP 2 Score: 45.4394 bits (106), Expect = 1.695e-86
Identity = 26/54 (48.15%), Postives = 29/54 (53.70%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSKGGELGGVVTAWALGS 737
            NYVVIKHAAL TSTI++                     KGG +GGVVT WAL S
Sbjct:  162 NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 215          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.363e-61
Identity = 101/143 (70.63%), Postives = 121/143 (84.62%), Query Frame = 1
Query:  160 SSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQETMLL 588
            SSF+G P++PS +R+QP K+    ++S+S + SPPYDL  F FDPIKESIVSREMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWLGGQLFS MVVRKPAH+FLDELG++YDEQ+  ++
Sbjct:   20 SSFYGTPLAPSSIRVQPTKAGAKPSISMSGAPSPPYDLKAFTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVV 161          

HSP 2 Score: 45.4394 bits (106), Expect = 2.363e-61
Identity = 26/54 (48.15%), Postives = 29/54 (53.70%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSKGGELGGVVTAWALGS 737
            NYVVIKHAAL TSTI++                     KGG +GGVVT WAL S
Sbjct:  158 NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVS 211          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.977e-58
Identity = 105/155 (67.74%), Postives = 127/155 (81.94%), Query Frame = 1
Query:  127 SVSSTT-NKLFDSSFHGAPMSPSLLRLQPIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQETMLL 588
            S+SST   +LFDSSFHG+ +S + + +      +P + S+ A+ +  YDLN F FDPIKESIVSREMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+GV YDEQ+T ++
Sbjct:    9 SLSSTKPQRLFDSSFHGSAISAAPISI----GLKPRSFSVRATTAG-YDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVV 158          

HSP 2 Score: 40.4318 bits (93), Expect = 3.977e-58
Identity = 23/59 (38.98%), Postives = 29/59 (49.15%), Query Frame = 3
Query:  579 YVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSKGGELGGVVTAWALGSSECRSQ 755
            YVV+KHAAL TSTI++                     KG  +GGVVT WAL +    +Q
Sbjct:  156 YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQ 214          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.570e-54
Identity = 103/159 (64.78%), Postives = 118/159 (74.21%), Query Frame = 1
Query:  133 SSTTNKLFDSSFHGAPMSPSLLRLQPIK----------SSRPNNLSISASAS-PPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQE 576
            ++  + L  SSF G+ + P+  R  P             + P   S+S S+S PPYDL +F+F PIKESIVSREMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWLGGQLFSAMVVRKPAH+FLDELGV YDE E
Sbjct:    3 TAAASSLLKSSFAGSRL-PAATRTTPASLVVATGPRGAGAGPICASMSMSSSNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAE 160          

HSP 2 Score: 41.5874 bits (96), Expect = 5.570e-54
Identity = 23/54 (42.59%), Postives = 29/54 (53.70%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSKGGELGGVVTAWALGS 737
            +YVVIKHAAL TST+++                     +GG +GGVVT WAL S
Sbjct:  161 DYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVS 214          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.748e-52
Identity = 101/157 (64.33%), Postives = 116/157 (73.89%), Query Frame = 1
Query:  133 SSTTNKLFDSSFHGAPMSPSLLRLQ---------PIKSSRPNNLSISASASPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQE 576
            ++  + L  SSF G+ + PS  R           P     P   SIS S +PPYDL +F+F PIKESIVSREMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWLGGQLFSAMVVR+PAH+FLDELGV YDE E
Sbjct:    3 TTAASSLLKSSFAGSRL-PSATRTTTPSSVAVATPRAGGGPIRASIS-SPNPPYDLTSFRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAE 157          

HSP 2 Score: 38.1206 bits (87), Expect = 1.748e-52
Identity = 21/54 (38.89%), Postives = 28/54 (51.85%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSKGGELGGVVTAWALGS 737
            +YVV+KHAAL TST+++                     + G +GGVVT WAL S
Sbjct:  158 DYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVS 211          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.764e-33
Identity = 66/111 (59.46%), Postives = 88/111 (79.28%), Query Frame = 1
Query:  247 ASASPPYDLN-TFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQ 573
            + A P Y L+ +F F PI+ES VSR MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWLGGQLFSAMVVRKPA +FL+E+GV Y+++
Sbjct:   37 SKAYPTYSLDESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDE 147          

HSP 2 Score: 31.187 bits (69), Expect = 2.764e-33
Identity = 21/59 (35.59%), Postives = 27/59 (45.76%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSKGGE-----LGGVVTAWALGS 737
            +YVV+KHAAL TST++A                     K G+     + GVVT W L S
Sbjct:  149 DYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVS 207          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 5.052e-32
Identity = 65/98 (66.33%), Postives = 79/98 (80.61%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDE 570
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWLGGQLFSAMV+R+PA +FL+ELGV Y+E
Sbjct:   48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEE 145          

HSP 2 Score: 28.8758 bits (63), Expect = 5.052e-32
Identity = 11/17 (64.71%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILA 626
            NYVV+KHA+L TST+++
Sbjct:  150 NYVVVKHASLFTSTLMS 166          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 8.571e-32
Identity = 64/99 (64.65%), Postives = 77/99 (77.78%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQ 573
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWLGGQLFSAM++RKPA  FL E+GV Y+++
Sbjct:   44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDE 142          

HSP 2 Score: 31.5722 bits (70), Expect = 8.571e-32
Identity = 22/58 (37.93%), Postives = 27/58 (46.55%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSKGGELG----GVVTAWALGS 737
            NYVV+KHAAL TSTI++                    ++  E G    GVVT W L S
Sbjct:  144 NYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVS 201          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.179e-31
Identity = 64/99 (64.65%), Postives = 76/99 (76.77%), Query Frame = 1
Query:  280 FKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQ 573
            FKF PI+ES VSR MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWLGGQLFSAMV+RKPA  FL E+GV Y+++
Sbjct:   48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDE 146          

HSP 2 Score: 31.187 bits (69), Expect = 4.179e-31
Identity = 21/58 (36.21%), Postives = 27/58 (46.55%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILAXXXXXXXXXXXXXXQPRT*YSK----GGELGGVVTAWALGS 737
            NYVV+KHAAL TSTI++                    ++    G  + GVVT W L S
Sbjct:  148 NYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVS 205          
BLAST of EY728397 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.495e-30
Identity = 64/128 (50.00%), Postives = 85/128 (66.41%), Query Frame = 1
Query:  202 LQPIKSSRPNNLSISASA---SPPYDLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGVDYDEQ 573
            + P+KS + +N +++  A    P  +L   KF PIKE  V R M RRY  DM   A +D    GAGSAGLSCAY L +  P+++I I+E +V+PGGG WLGGQL SAMV RKPA  FLD++GV Y+++
Sbjct:   24 MDPLKSKQQSNATVNKPAFKPEPAVNLTPIKFAPIKEHQVQRAMVRRYFQDMEERAISDVIIVGAGSAGLSCAYALGTARPDLKITILESNVAPGGGCWLGGQLMSAMVCRKPADEFLDQVGVPYEDE 151          

HSP 2 Score: 29.6462 bits (65), Expect = 4.495e-30
Identity = 12/17 (70.59%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  576 NYVVIKHAALCTSTILA 626
            N+VV+KHAAL TST+L+
Sbjct:  153 NFVVVKHAALFTSTVLS 169          
The following BLAST results are available for this feature:
BLAST of EY728397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
THI4_CITSI1.695e-8693.63Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ALNGL2.363e-6170.63Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI4_ARATH3.977e-5867.74Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI41_MAIZE5.570e-5464.78Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE1.748e-5264.33Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO2.764e-3359.46Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_ASPOR5.052e-3266.33Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_FUSOX8.571e-3264.65Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_FUSSH4.179e-3164.65Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_UROFA4.495e-3050.00Thiazole biosynthetic enzyme, mitochondrial OS=Uro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-003-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728397 ID=EY728397; Name=EY728397; organism=Citrus sinensis; type=EST; length=824bp
CCACGCGTCCGCATCATCACTGCTGCAAATCAAATTACTTCTCATTATCA
AACTTCTAAGCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACCATGGCAG
CCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCCACCACCAATAAG
CTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCTACG
TCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTGCTT
CTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATCAAA
GAATCCATTGTTTCTCGTGAAATGACACGCAGGTACATGACGGACATGAT
CACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCC
TCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATT
ATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCGGTGGACAGCT
CTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGC
TTGGCGTCGACTACGATGAGCAAGAAACTATGTTGTTATCAAGCATGCAG
CGCTGTGCACCTCCACTATATTAGCAGGCTCCTGGTCCGGCCCATCGTGG
AGCTCTTTATTGCCGTGGCAACCGAGGACTTGATATTCAAAGGGGGGAGA
ATTGGGGGGGGTGGTGACCGCGTGGGCGTTGGGGTCAAGTGAATGCCGAA
GCCAGGTCGGGCTGGCATCCGAAGGGGATGGGAGGGAAGGGGGTGGTGAG
CCCTCTGTGGCCTGGGGGGCCGTG
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