EY728392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728392 vs. ExPASy Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28 Identity = 85/277 (30.69%), Postives = 133/277 (48.01%), Query Frame = 2 Query: 14 ALETWQHYLLPKEFVIHTDHESXXXXXXXXXXXXRHAKWVEFIEPFPYVIKYKQGKENVVADALSRRYALISTLNAKLLGFEYIKELYANDP-------------------DFANVFNACEKV-----AFGKFYK-HDGLLFRENKLCVPHSSLRELLVREAHGGGLMG-HFGIAKTLDVLKEHFFWPHMKRDVERICEKCITCKHAKS-RVLPHGLXYPLPIPSEPWVDISMDFVLGLLRSXRGNDSVFVVVDRFSKMAHSIPCHKDDDATSIANL 763 AL +++ L K F + TDH S R +W++ + + + ++Y G +NVVADA+SR I+ ++ + E K Y +DP + + F + +K F K Y D +++ +++L VP + ++R H L G HFG+ TL + ++WP ++ + + C+ C+ KS R HGL PLPI W+DISMDFV GL + + + VVVDRFSK AH I K DAT + +L Sbjct: 969 ALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQ-QNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDL 1244
BLAST of EY728392 vs. ExPASy Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3) HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28 Identity = 85/277 (30.69%), Postives = 133/277 (48.01%), Query Frame = 2 Query: 14 ALETWQHYLLPKEFVIHTDHESXXXXXXXXXXXXRHAKWVEFIEPFPYVIKYKQGKENVVADALSRRYALISTLNAKLLGFEYIKELYANDP-------------------DFANVFNACEKV-----AFGKFYK-HDGLLFRENKLCVPHSSLRELLVREAHGGGLMG-HFGIAKTLDVLKEHFFWPHMKRDVERICEKCITCKHAKS-RVLPHGLXYPLPIPSEPWVDISMDFVLGLLRSXRGNDSVFVVVDRFSKMAHSIPCHKDDDATSIANL 763 AL +++ L K F + TDH S R +W++ + + + ++Y G +NVVADA+SR I+ ++ + E K Y +DP + + F + +K F K Y D +++ +++L VP + ++R H L G HFG+ TL + ++WP ++ + + C+ C+ KS R HGL PLPI W+DISMDFV GL + + + VVVDRFSK AH I K DAT + +L Sbjct: 943 ALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYTITPETSRPIDTESWKSYYKSDPLCSAVLIHMKELTQHNVTPEDMSAFRSYQKKLELSETFRKNYSLEDEMIYYQDRLVVPIKQ-QNAVMRLYHDHTLFGGHFGVTVTLAKISPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDL 1218
BLAST of EY728392 vs. ExPASy Swiss-Prot
Match: RTF23_SCHPO (Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.728e-25 Identity = 82/275 (29.82%), Postives = 134/275 (48.73%), Query Frame = 2 Query: 14 ALETWQHYLLP--KEFVIHTDHESXXXXXXXXXXXX--RHAKWVEFIEPFPYVIKYKQGKENVVADALSR------------RYALISTLNAKLLGFEYIKEL---YANDPDFANVFNACEKVAFGKFYKHDGLLFR-ENKLCVPHSS-LRELLVREAHGGGLMGHFGIAKTLDVLKEHFFWPHMKRDVERICEKCITCKHAKSRV-LPHGLXYPLPIPSEPWVDISMDFVLGLLRSXRGNDSVFVVVDRFSKMAHSIPCHKDDDATSIANLFSK 772 +L+ W+HYL + F I TDH + R A+W F++ F + I Y+ G N +ADALSR I+ +N + ++ ++ Y ND N+ N +K DGLL ++++ +P+ + L ++++ H G + H GI +++ F W +++ ++ + C TC+ KSR P+G P+P PW +SMDF+ L S G +++FVVVDRFSKMA +PC K A A +F + Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035
BLAST of EY728392 vs. ExPASy Swiss-Prot
Match: RTF22_SCHPO (Retrotransposable element Tf2 155 kDa protein type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.728e-25 Identity = 82/275 (29.82%), Postives = 134/275 (48.73%), Query Frame = 2 Query: 14 ALETWQHYLLP--KEFVIHTDHESXXXXXXXXXXXX--RHAKWVEFIEPFPYVIKYKQGKENVVADALSR------------RYALISTLNAKLLGFEYIKEL---YANDPDFANVFNACEKVAFGKFYKHDGLLFR-ENKLCVPHSS-LRELLVREAHGGGLMGHFGIAKTLDVLKEHFFWPHMKRDVERICEKCITCKHAKSRV-LPHGLXYPLPIPSEPWVDISMDFVLGLLRSXRGNDSVFVVVDRFSKMAHSIPCHKDDDATSIANLFSK 772 +L+ W+HYL + F I TDH + R A+W F++ F + I Y+ G N +ADALSR I+ +N + ++ ++ Y ND N+ N +K DGLL ++++ +P+ + L ++++ H G + H GI +++ F W +++ ++ + C TC+ KSR P+G P+P PW +SMDF+ L S G +++FVVVDRFSKMA +PC K A A +F + Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035
BLAST of EY728392 vs. ExPASy Swiss-Prot
Match: RTF21_SCHPO (Retrotransposable element Tf2 155 kDa protein type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.728e-25 Identity = 82/275 (29.82%), Postives = 134/275 (48.73%), Query Frame = 2 Query: 14 ALETWQHYLLP--KEFVIHTDHESXXXXXXXXXXXX--RHAKWVEFIEPFPYVIKYKQGKENVVADALSR------------RYALISTLNAKLLGFEYIKEL---YANDPDFANVFNACEKVAFGKFYKHDGLLFR-ENKLCVPHSS-LRELLVREAHGGGLMGHFGIAKTLDVLKEHFFWPHMKRDVERICEKCITCKHAKSRV-LPHGLXYPLPIPSEPWVDISMDFVLGLLRSXRGNDSVFVVVDRFSKMAHSIPCHKDDDATSIANLFSK 772 +L+ W+HYL + F I TDH + R A+W F++ F + I Y+ G N +ADALSR I+ +N + ++ ++ Y ND N+ N +K DGLL ++++ +P+ + L ++++ H G + H GI +++ F W +++ ++ + C TC+ KSR P+G P+P PW +SMDF+ L S G +++FVVVDRFSKMA +PC K A A +F + Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQ 1035 The following BLAST results are available for this feature:
BLAST of EY728392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728392 ID=EY728392; Name=EY728392; organism=Citrus sinensis; type=EST; length=870bpback to top |