EY728328

Overview
NameEY728328
Unique NameEY728328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11160 contig Csv1_Contig11160:4..590. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY728328 vs. ExPASy Swiss-Prot
Match: Y202_CLOB8 (Uncharacterized protein Cbei_0202 OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=Cbei_0202 PE=4 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 4.565e-11
Identity = 40/126 (31.75%), Postives = 70/126 (55.56%), Query Frame = 3 
Query:  210 LRITELKLPIDHPEEDLRPAIVQRLGIASDDLLDFTLFKRSYDARKKSSELCFIYTIDLEVKGEAALLLKFADDRNVNPAPDIXYKVVGHAPEGLTERPIVVXFGPCGIFAGLLLAQMGXQPIILE 587
            +RI  + L +D     L   I ++L ++ +D+    + KRS DARKK+ ++   +++++  K E  LL +   D++++       + +    E +  RP+VV FGP GIFA L LA+ G +PI+ E
Sbjct:    3 IRINNINLSLDDDLNVLEKKICKKLNMSKEDISRLDIIKRSIDARKKN-DIKVSFSVNVFCKKEKMLLSRI-HDKDISFEEIREIESIKSGTEEIKARPVVVGFGPAGIFAALTLARYGYKPIVYE 126
The following BLAST results are available for this feature:
BLAST of EY728328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y202_CLOB84.565e-1131.75Uncharacterized protein Cbei_0202 OS=Clostridium b... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-C12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728328 ID=EY728328; Name=EY728328; organism=Citrus sinensis; type=EST; length=587bp
AGCGTCAGCGGCAGCCTGCAGCACATGTCCGCCGAGCTTCGGGTCAACGG
CCAGGTGCAACGCGGTTGCGCGTCGTTCGGCGGCTCGCGGGACGACTGAT
TGTCCGCTGCGCTGTTTTAACATGACGGGAAACCGCTGTTGGGGCTTATA
ATCGCCGGTTTGCAAAACAGCCGGCCTCTTTGCCCGCCGCCTACCGGATT
CCTGTCATGTTACGAATCACCGAACTCAAGCTGCCCATCGACCATCCCGA
AGAAGACCTGCGGCCTGCCATTGTGCAGCGCCTGGGCATCGCCAGTGATG
ACCTGCTCGATTTCACTCTGTTCAAACGCAGCTACGACGCCCGCAAGAAA
TCGTCGGAGCTGTGCTTCATCTACACCATCGACCTGGAAGTCAAAGGCGA
GGCGGCCCTGCTGCTCAAGTTCGCCGACGACCGCAACGTCAACCCGGCAC
CGGACATCANCTACAAGGTCGTGGGCCATGCGCCGGAAGGCCTGACTGAG
CGGCCGATCGTCGTCNGTTTTGGCCCGTGCGGGATCTTCGCCGGACTGTT
GCTGGCGCAGATGGGCTTNCAGCCGATCATCCTCGAA
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