EY728316

Overview
NameEY728316
Unique NameEY728316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.867e-62
Identity = 133/187 (71.12%), Postives = 136/187 (72.73%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGRXXXXXXXXXXXXMNQQHSLAWIPMXXXXXXXXXXXXXXG-FGGPGIKS*K-YWMIEE 561
            S EMTRRYMTDMITYADTD    GAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWL GQLFSAMVVRKPAHIFLDELGIDYDEQD+YVVIKHAALFTSTIMSKLLARP  +LFNAVAAEDLIVKGGR            MN        P               G FG  G+K  K   MIEE
Sbjct:   74 SREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEE 260          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.811e-60
Identity = 108/130 (83.08%), Postives = 119/130 (91.54%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGR 396
            S EMTRRYMTDMITYA+TD    GAGSAGLS AYE+SKNPN+Q+AIIEQSVSPGGGAWL GQLFSAM+VRKPAH+FLDE+G+ YDEQD+YVV+KHAALFTSTIMSKLLARP  +LFNAVAAEDLIVKG R
Sbjct:   67 SREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNR 196          

HSP 2 Score: 31.5722 bits (70), Expect = 5.811e-60
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 3
Query:  444 TQSCMDSHVIESKGGVNPVGMIGLWG-PGNKKLKILDD*GMLEIRTGHKSSKKLLLGDQEGGLV*YYRIEIPKLI 665
            TQSCMD +V+E+K  V+  G  G +G  G K+LK +   GM++   G K+   L +   E  +V   R  +P +I
Sbjct:  213 TQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSI---GMIDHVPGMKA---LDMNTAEDAIVRLTREVVPGMI 281          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.791e-56
Identity = 119/178 (66.85%), Postives = 128/178 (71.91%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGRXXXXXXXXXXXXMNQQHSLAWIPMXXXXXXXXXXXXXXG-FGGPGIKS 537
            S EMTRRYM DMITYADTD    GAGS+GL C YELSKNP++Q+AIIEQSVSPGGGAWL GQLFS MVVRKPAH+FLDELGI+YDEQD+YVVIKHAALFTSTIMSKLLARP  +LFNAVAAEDLIVKGGR            MN        P               G FG  G+KS
Sbjct:   71 SREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQSVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKS 247          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.762e-55
Identity = 114/177 (64.41%), Postives = 124/177 (70.06%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGRXXXXXXXXXXXXMNQQHSLAWIPMXXXXXXXXXXXXXXG-FGGPGIK 534
            S EMTRRYMTDMITYADTD    GAGSAGLSCAYELSK+P + IAI+EQSVSPGGGAWL GQLFSAMVVRKPAH+FLDELG+ YDE + YVVIKHAALFTST+MS LLARP  +LFNAVA EDLIV+GGR            MN        P               G FG  G+K
Sbjct:   73 SREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 249          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.087e-53
Identity = 109/177 (61.58%), Postives = 124/177 (70.06%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGRXXXXXXXXXXXXMNQQHSLAWIPMXXXXXXXXXXXXXXG-FGGPGIK 534
            S EMTRRYMTDMIT+ADTD    GAGSAGLSCAYELSK+P + +AI+EQSVSPGGGAWL GQLFSAMVVR+PAH+FLDELG+ YDE + YVV+KHAALFTST+MS+LLARP  +LFNAVA EDLIV+ GR            MN        P               G FG  G+K
Sbjct:   70 SREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQSVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK 246          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 8.931e-40
Identity = 80/131 (61.07%), Postives = 105/131 (80.15%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYEL-SKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVKGGR 396
            S  MTRRY +D+  YA++D    GAGSAGL+ AY + ++ P+++IAIIE SV+PGGGAWL GQLFSAMVVRKPA +FL+E+G+ Y+++  YVV+KHAALFTST+M++ LA P  +LFNA A EDLIVK G+
Sbjct:   60 SRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGK 190          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.092e-37
Identity = 79/128 (61.72%), Postives = 97/128 (75.78%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVK 387
            S  MTRRY  D+  YA++D    GAGS GLS AY L K  P+++IAIIE SVSPGGGAWL GQLFSAM++RKPA  FL E+G+ Y+++ +YVV+KHAALFTSTIMSK+L  P  +LFNA   EDLI +
Sbjct:   55 SRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITR 182          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.149e-37
Identity = 79/130 (60.77%), Postives = 101/130 (77.69%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSK-NPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE--QDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVK 387
            S  MTRRY  D+  YA++D    GAGS GLS AY L+K  P+++IAI+E SVSPGGGAWL GQLFSAMV+R+PA +FL+ELG+ Y+E    +YVV+KHA+LFTST+MSK+L+ P  +LFNA A EDLI +
Sbjct:   59 SRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVEASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITR 188          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.418e-37
Identity = 79/128 (61.72%), Postives = 96/128 (75.00%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVK 387
            S  MTRRY  D+  YA++D    GAGS GLS  Y L K  P+++IAIIE SVSPGGGAWL GQLFSAMV+RKPA  FL E+G+ Y+++ +YVV+KHAALFTSTIMSK+L  P  +LFNA   EDLI +
Sbjct:   59 SRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIEASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITR 186          
BLAST of EY728316 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.426e-35
Identity = 72/128 (56.25%), Postives = 96/128 (75.00%), Query Frame = 1
Query:    7 SGEMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPQRQLFNAVAAEDLIVK 387
            S  MT RY  D+  +A +D    GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WL GQLFSAMV+RKPAH+FL EL I Y+++  YVV+KHAALF ST++SK+L  P  +LFNA   EDL+ +
Sbjct:   49 SRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTR 176          

HSP 2 Score: 22.3274 bits (46), Expect = 1.426e-35
Identity = 10/17 (58.82%), Postives = 11/17 (64.71%), Query Frame = 3
Query:  444 TQSCMDSHVIESKGGVN 494
            TQ CMD +VIE  G  N
Sbjct:  202 TQCCMDPNVIELAGYKN 218          
The following BLAST results are available for this feature:
BLAST of EY728316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
THI4_CITSI4.867e-6271.12Thiazole biosynthetic enzyme, chloroplastic OS=Cit... [more]
THI4_ARATH5.811e-6083.08Thiazole biosynthetic enzyme, chloroplastic OS=Ara... [more]
THI4_ALNGL1.791e-5666.85Thiazole biosynthetic enzyme, chloroplastic OS=Aln... [more]
THI41_MAIZE5.762e-5564.41Thiazole biosynthetic enzyme 1-1, chloroplastic OS... [more]
THI42_MAIZE1.087e-5361.58Thiazole biosynthetic enzyme 1-2, chloroplastic OS... [more]
THI2_SCHPO8.931e-4061.07Thiazole biosynthetic enzyme, mitochondrial OS=Sch... [more]
THI4_FUSOX1.092e-3761.72Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_ASPOR4.149e-3760.77Thiazole biosynthetic enzyme, mitochondrial OS=Asp... [more]
THI4_FUSSH5.418e-3761.72Thiazole biosynthetic enzyme, mitochondrial OS=Fus... [more]
THI4_YEAST1.426e-3556.25Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-002-B12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728316 ID=EY728316; Name=EY728316; organism=Citrus sinensis; type=EST; length=836bp
CACGCGTCCGGTGAAATGACGCGCAGGTACATGACGGACATGATCACTTA
TGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTGGCCTCTCTT
GTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCTATTATCGAA
CAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACAGCTCTTCTC
TGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACGAGCTTGGCA
TCGACTACGATGAGCAAGACAGCTATGTTGTGATCAAGCATGCAGCGCTG
TTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCCAACGTCAGCT
CTTTAATGCAGTGGCAGCCGAAGACTTGATAGTCAAAGGCGGCAGAGTTG
GTGGTGTGGTGGACAACTGGGCCGTGGTGGTCATGAATCAACAACACAGT
CTTGCATGGATTCCCATGTAATTGAAAGCAAAGGTGGTGTTAACCCTGTT
GGCATGATTGGGCTTTGGGGGCCCGGGAATAAAAAGTTGAAAATATTGGA
TGATTGAGGAATGCTTGAAATAAGGACCGGACATAAATCCTCCAAAAAGC
TATTGTTAGGGGACCAGGAGGGTGGCCTGGTTTAATATTACCGCATTGAA
ATTCCCAAATTAATTTGTCCTTAAAGGGGGGCAATTTGGGACAATAATAA
TTCGGGGGCAAAGGGGCCGCATTGGGGTTAAATCCGGGGCCCCCCAAGTC
ATAAAGGGAATATTTTGGGAGTGTCCCCTGAGCTAGCTTACCTGGCCGAT
TTGCCGAAAAGGTGAAGGTAATTGAAAAAACAGGTC
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