EY728304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.616e-51 Identity = 111/246 (45.12%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP++++CDPAG++ G KAT+AG+K+ E+ FLEKK+K +TF++TV+T I+ L Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.616e-51 Identity = 111/246 (45.12%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP++++CDPAG++ G KAT+AG+K+ E+ FLEKK+K +TF++TV+T I+ L Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.616e-51 Identity = 111/246 (45.12%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP++++CDPAG++ G KAT+AG+K+ E+ FLEKK+K +TF++TV+T I+ L Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 2.616e-51 Identity = 111/246 (45.12%), Postives = 149/246 (60.57%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 GRL+QVEYAFKA+ G+TS+ VRGKD +VTQKKVPDKLLD ++VTHLF IT+ +G + TGM AD+R+ VQ+ARYEAA +++KYGYE+PV D+ CK RIAD SQVYTQ+A MRPLG +++ IDEE GP++++CDPAG++ G KAT+AG+K+ E+ FLEKK+K +TF++TV+T I+ L Sbjct: 20 GRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPV-----------------------DMLCK----------------------------------------RIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCL 202
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.534e-46 Identity = 92/98 (93.88%), Postives = 95/98 (96.94%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD TSV+HLFPITKYLGLLATGM ADARTLVQQAR EAAEFRFKYGYEMPVDVL+KW Sbjct: 20 GRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKW 117 HSP 2 Score: 153.295 bits (386), Expect = 3.759e-41 Identity = 73/85 (85.88%), Postives = 79/85 (92.94%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 IADKSQVYTQHAYMRPLGVVAM+L IDEE GP+LF+CDPAGHFFGHKATSAG KEQEAI FLEKKMKNDPAF+++ETVQT IS L Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISAL 202 HSP 3 Score: 34.6538 bits (78), Expect = 3.759e-41 Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 753 SVLQEDFRANEIEVGVVTTKIQIQNLVHEEE 845 SVLQEDF+A+EIEVGVV + I ++ EE Sbjct: 204 SVLQEDFKASEIEVGVVKKEDPIFRVLTTEE 234
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 7.373e-46 Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVKAAG+TSIGVRGKDS+CVVT KKVPDKLLD+TSVTHLFPITKYLGLLATGM ADARTLVQQAR EAAEFRF YGYEMPVDVLAKW Sbjct: 20 GRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKW 117 HSP 2 Score: 152.14 bits (383), Expect = 4.069e-40 Identity = 71/85 (83.53%), Postives = 80/85 (94.12%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 IADKSQVYTQHAYMRPLGVVAMVL ID+E GP+L++CDPAGH+FGHKATSAGLK+QEAI FLEKKMKNDP+FT++ETVQT IS L Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISAL 202 HSP 3 Score: 32.3426 bits (72), Expect = 4.069e-40 Identity = 15/17 (88.24%), Postives = 16/17 (94.12%), Query Frame = 3 Query: 753 SVLQEDFRANEIEVGVV 803 SVLQEDF+A EIEVGVV Sbjct: 204 SVLQEDFKATEIEVGVV 220
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.659e-45 Identity = 89/98 (90.82%), Postives = 95/98 (96.94%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRL+QVEYAFKAVK+AGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKY+GLLATG+ ADAR+LV QAR EAAEFRFK+GYEMPVDVLAKW Sbjct: 20 GRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKW 117 HSP 2 Score: 141.354 bits (355), Expect = 1.371e-37 Identity = 68/85 (80.00%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 IADK+QVYTQHAYMRPLGVVAMVL DEE +LF+CDPAGHFFGHKATSAGLKEQEAI FLEKKMK+DP F+++ETVQ IS L Sbjct: 118 IADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISAL 202 HSP 3 Score: 34.6538 bits (78), Expect = 1.371e-37 Identity = 21/38 (55.26%), Postives = 26/38 (68.42%), Query Frame = 3 Query: 753 SVLQEDFRANEIEVGVVTTKIQI-QNLVHEEESRPLTA 863 SVLQEDF+A EIEVGVV ++ + L EE + LTA Sbjct: 204 SVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLTA 241
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44 Identity = 86/98 (87.76%), Postives = 94/98 (95.92%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVTQKKVPDKLLD +SV+HLFP+TKYLGLLATGM AD+R+LVQQAR EAAEFRF+YGYEMP D+LAKW Sbjct: 20 GRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKW 117 HSP 2 Score: 147.902 bits (372), Expect = 3.379e-39 Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 IADKSQVYTQHAYMRPLGVVAMVL IDEE GP L++CDPAGHF+GHKATSAG+KEQEA+ FLEKKMK +PAFT+ ETVQT IS L Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISAL 202 HSP 3 Score: 33.4982 bits (75), Expect = 3.379e-39 Identity = 21/38 (55.26%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 753 SVLQEDFRANEIEVGVVTTKIQI-QNLVHEEESRPLTA 863 SVLQEDF+A EIEVGVV + ++L EE LTA Sbjct: 204 SVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLTA 241
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.537e-43 Identity = 85/98 (86.73%), Postives = 93/98 (94.90%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW 306 GRLFQVEYAFKAVK AG+TSIGVRGKDSVCVVTQKKVPDKLLD +SVTHLFPITKY+GL+ATG+ ADAR+LVQQAR +AAEFRF YGYEMPVD+LAKW Sbjct: 20 GRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKW 117 HSP 2 Score: 146.747 bits (369), Expect = 3.379e-39 Identity = 68/85 (80.00%), Postives = 77/85 (90.59%), Query Frame = 1 Query: 496 IADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 IADKSQVYTQHAYMRPLGVVAMV+ +DEE GP L++CDPAGHF+GHKATSAG+KEQEA+ FLEKKMK +P+FTF ETVQT IS L Sbjct: 118 IADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISAL 202 HSP 3 Score: 34.6538 bits (78), Expect = 3.379e-39 Identity = 21/38 (55.26%), Postives = 25/38 (65.79%), Query Frame = 3 Query: 753 SVLQEDFRANEIEVGVVTTK-IQIQNLVHEEESRPLTA 863 SVLQEDF+A EIEVGVV + + + L EE LTA Sbjct: 204 SVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLTA 241
BLAST of EY728304 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.816e-35 Identity = 92/246 (37.40%), Postives = 124/246 (50.41%), Query Frame = 1 Query: 13 GRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYLGLLATGMIADARTLVQQARYEAAEFRFKYGYEMPVDVLAKW*VFISF*VEF*FACLVFDIFCKLLTEHCLFPYSFFVTLLLKFWLNVAVLLSEKQLC*FPFMYRIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFRCDPAGHFFGHKATSAGLKEQEAIYFLEKKMKNDPAFTFQETVQTGISTL 750 GRL+QVEYAFKA+ +T++ ++ D V TQKKV +K + +VTHLF ITK +G TG IAD+R+ VQ+ARYEAA FR Y Y + V D+ C+ RIAD +QVYTQ+A MRPLG ++++ D E GP +++ DPAG+F G KA S G K EA +LEKK K P + ++ +Q IS L Sbjct: 20 GRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFR--YKYGYEMPV---------------------DVLCR----------------------------------------RIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYK--PNLSEEKAIQLAISCL 200 HSP 2 Score: 26.1794 bits (56), Expect = 7.816e-35 Identity = 13/32 (40.62%), Postives = 19/32 (59.38%), Query Frame = 3 Query: 750 ASVLQEDFRANEIEVGVVTTKIQIQNLVHEEE 845 +SVL DF+ N IE+GVV+ ++ E E Sbjct: 201 SSVLAIDFKPNGIEIGVVSKSDPTFRILDERE 232 The following BLAST results are available for this feature:
BLAST of EY728304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728304 ID=EY728304; Name=EY728304; organism=Citrus sinensis; type=EST; length=916bpback to top |