EY728252

Overview
NameEY728252
Unique NameEY728252
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728252 vs. ExPASy Swiss-Prot
Match: SDR1_ARATH ((+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.109e-40
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 3
Query:  156 RNAVVTGANKGIGLEICRQLASNGVEVILTARDEQRGIEAVENLRQS---GVSNFVFHQLDVKDSASAAMLAKFIETHFGKLDSLVTD 410
            R AVVTGAN+GIG EICRQLAS G+ V+LT+RDE RG+EAVE L++       + +FHQLDV D AS   LA+F++T FGKLD LV +
Sbjct:    7 RYAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQLDVADPASITSLAEFVKTQFGKLDILVNN 94          

HSP 2 Score: 75.8702 bits (185), Expect = 6.109e-40
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 1
Query:  595 IMDQTYEKTKECLETNFYGTKRVTEALLPLQQLSKSARIVNMSSFYGQXKYIGNEKG*AELWDIESPTVERLHEIVQWFLRAFK 846
            I+ +TYE T+EC++ N+YG KR+ EA +PL +LS S RIVN+SS  GQ K + NE     L D E+ T ER+ +++   L  FK
Sbjct:  121 IITETYELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNEWAKGILSDAENLTEERIDQVINQLLNDFK 204          

HSP 3 Score: 26.1794 bits (56), Expect = 6.109e-40
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  488 VNNAGDSGIILNSEAFRA 541
            VNNAG  GII ++EA RA
Sbjct:   92 VNNAGIGGIITDAEALRA 109          
BLAST of EY728252 vs. ExPASy Swiss-Prot
Match: SALR_PAPBR (Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.847e-38
Identity = 55/98 (56.12%), Postives = 67/98 (68.37%), Query Frame = 3
Query:  123 MEETNTRSTAK-RNAVVTGANKGIGLEICRQLASNGVEVILTARDEQRGIEAVENLRQSGVSNFVFHQLDVKDS-ASAAMLAKFIETHFGKLDSLVTD 410
            M ET   +  K R AVVTG NKGIG EIC+QL+S+G+ V+LT RD  RG+EAVE L+ S   N VFHQLDV D   + + LA FI+  FGKLD LV +
Sbjct:    1 MPETCPNTVTKMRCAVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNSNHENVVFHQLDVTDPITTMSSLADFIKARFGKLDILVNN 98          

HSP 2 Score: 80.8777 bits (198), Expect = 1.847e-38
Identity = 42/84 (50.00%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  595 IMDQTYEKTKECLETNFYGTKRVTEALLPLQQLSKSARIVNMSSFYGQXKYIGNEKG*AELWDIESPTVERLHEIVQWFLRAFK 846
            +M +TYE  +ECL+ N+YG K VTE LLPL QLS S RIVN+SS  G  KY+ NE     L D ++ T ER+  +V   L+ FK
Sbjct:  137 LMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFK 220          

HSP 3 Score: 21.557 bits (44), Expect = 1.847e-38
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  488 VNNAGDSGIILNSEAFRA 541
            VNNAG +G  ++++ F+A
Sbjct:   96 VNNAGVAGFSVDADRFKA 113          
BLAST of EY728252 vs. ExPASy Swiss-Prot
Match: SDR2_ARATH (Short-chain dehydrogenase/reductase 2 OS=Arabidopsis thaliana GN=SDR2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.281e-38
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = 3
Query:  156 RNAVVTGANKGIGLEICRQLASNGVEVILTARDEQRGIEAVENLRQS---GVSNFVFHQLDVKDSASAAMLAKFIETHFGKLDSLVTD 410
            R A+VTG N+GIG EICRQLA+ G+ VILT+RDE++G+EAVE L++       + VFHQLDV D  S   LA+F++THFGKLD L+ +
Sbjct:    7 RYAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQSIVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINN 94          

HSP 2 Score: 73.1738 bits (178), Expect = 5.281e-38
Identity = 40/97 (41.24%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  604 QTYEKTKECLETNFYGTKRVTEALLPLQQLSKSARIVNMSSFYGQXKYIGNEKG*AELWDIESPTVERLHEIVQWFLRAFKR*AAS*R-WHYTVXAY 891
            +TYE  +EC++ N+YG KR+ EA +PL QLS S RI+N+SSF GQ K + NE     L D E+ T  R+ +++   L   K   A  + W   + AY
Sbjct:  124 ETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNEWAKGILSDAENLTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAY 220          

HSP 3 Score: 23.0978 bits (48), Expect = 5.281e-38
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  488 VNNAGDSGIILNSEAFRA 541
            +NNAG  G+I + +A RA
Sbjct:   92 INNAGVGGVITDVDALRA 109          
BLAST of EY728252 vs. ExPASy Swiss-Prot
Match: MNR1_CAPAN ((+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.389e-22
Identity = 60/121 (49.59%), Postives = 83/121 (68.60%), Query Frame = 3
Query:  141 RSTAKRNAVVTGANKGIGLEICRQLASNGVEVILTARDEQRGIEAVENLRQSGVSNF-----VFHQLDVKDSASAAMLAKFIETHFGKLDSLVTDLMF*YGISAGIIFSGNCKMLFSLLRR 488
            ++T+ R AVVTG NKGIG E CRQLAS GV V+LT+RDE++GIEA+E L++   SNF     +FHQLD+ D AS + L   I+T FG+LD L+ +     GIS G++  G+ ++L  +L R
Sbjct:    4 KTTSTRYAVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEE--SNFTDEHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNA----GIS-GVMVEGDVQVLKEILER 117          

HSP 2 Score: 77.7962 bits (190), Expect = 9.934e-14
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 1
Query:  610 YEKTKECLETNFYGTKRVTEALLPLQQLSKSARIVNMSSFYGQXKYIGNEKG*AELWDIESPTVERLHEIVQWFLRAF-KR*AAS*RWHYTVXAYEYPSCS 909
            YE TKEC+ETN+YG KR+TEA +PL QLS S RIVN++S  G+ K + N+     L D +S T E++ ++V  FL+ F ++   S  W     AY+    S
Sbjct:  145 YELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVNVASSMGKLKLLCNKWAIEVLRDADSLTEEKVDQVVNEFLKDFTEKSTESKGWPSYFTAYKVSKAS 245          
BLAST of EY728252 vs. ExPASy Swiss-Prot
Match: CBR1_BOVIN (Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11
Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 3
Query:  162 AVVTGANKGIGLEICRQLASN-GVEVILTARDEQRGIEAVENLRQSGVSNFVFHQLDVKDSASAAMLAKFIETHFGKLDSLVTD 410
            A+VTGANKGIG  I R L      +V+LTARDE RG  AV+ L+  G+S  +FHQLD+ D  S   L  F+   +G LD LV +
Sbjct:    8 ALVTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGLSP-LFHQLDIDDRQSIRALRDFLRKEYGGLDVLVNN 90          
BLAST of EY728252 vs. ExPASy Swiss-Prot
Match: CBR3_HUMAN (Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CBR3 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 41/90 (45.56%), Postives = 55/90 (61.11%), Query Frame = 3
Query:  144 STAKRNAVVTGANKGIGLEICRQLASN-GVEVILTARDEQRGIEAVENLRQSGVSNFVFHQLDVKDSASAAMLAKFIETHFGKLDSLVTD 410
            S+  R A+VTGAN+GIGL I R+L      +V+LTARD  RG  AV+ L+  G+S   FHQLD+ D  S   L  F+   +G L+ LV +
Sbjct:    2 SSCSRVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSP-RFHQLDIDDLQSIRALRDFLRKEYGGLNVLVNN 90          
The following BLAST results are available for this feature:
BLAST of EY728252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
SDR1_ARATH6.109e-4060.23(+)-neomenthol dehydrogenase OS=Arabidopsis thalia... [more]
SALR_PAPBR1.847e-3856.12Salutaridine reductase OS=Papaver bracteatum GN=SA... [more]
SDR2_ARATH5.281e-3856.82Short-chain dehydrogenase/reductase 2 OS=Arabidops... [more]
MNR1_CAPAN3.389e-2249.59(+)-neomenthol dehydrogenase OS=Capsicum annuum GN... [more]
CBR1_BOVIN2.061e-1148.81Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1... [more]
CBR3_HUMAN7.831e-1145.56Carbonyl reductase [NADPH] 3 OS=Homo sapiens GN=CB... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-D10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728252 ID=EY728252; Name=EY728252; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGGTAAAGAAAAGTTGTTTCATGGCATGGAAAATTGAGGCT
CACACGAATAATATCACCAGGAAAGAAAGAACAAATTTCAACTCGGAGCT
CTGATGCGATGTTTCAACAGATATGGAGGAAACCAATACCAGAAGCACAG
CAAAAAGGAATGCCGTTGTGACCGGAGCAAACAAAGGAATTGGACTGGAG
ATATGCCGCCAGTTAGCATCTAATGGAGTTGAGGTCATACTGACCGCTAG
AGATGAGCAAAGGGGGATCGAAGCTGTCGAAAATTTAAGACAATCTGGTG
TTTCTAATTTTGTATTTCACCAGCTTGATGTGAAGGATTCTGCCAGCGCA
GCAATGTTGGCAAAATTTATTGAAACTCACTTTGGAAAGCTTGATAGCCT
GGTAACAGACCTGATGTTTTAGTATGGCATCAGTGCAGGTATAATTTTCT
CGGGAAATTGTAAAATGCTCTTTTCACTTCTACGCAGGTGAATAATGCAG
GGGATAGTGGAATAATTTTGAACAGTGAAGCTTTCAGAGCATTCAGGCCA
GTGGACAGAAGGTTACTGAAAATAATGCTAGTTTGTTAAAGGGAATAATG
GACCAGACATATGAGAAGACAAAAGAATGCCTGGAGACAAATTTCTATGG
AACCAAAAGGGTAACTGAAGCACTTCTTCCCTTACAGCAGCTCTCCAAGT
CAGCCAGAATAGTGAACATGTCTTCCTTCTATGGACAGCNTAAGTATATC
GGCAATGAAAAAGGCTAAGCAGAACTTTGGGATATAGAGAGCCCTACAGT
TGAGCGGCTACATGAGATTGTGCAATGGTTTTTGAGGGCTTTCAAGAGAT
AAGCTGCAAGCTAACGCTGGCACTATACTGTTNCTGCATATGAGTATCCA
AGCTGCAGTGACCCTAAACCAGAATCTAGCAGGT
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