EY728209

Overview
NameEY728209
Unique NameEY728209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728209 vs. ExPASy Swiss-Prot
Match: DC4C_ACIAD (4-carboxymuconolactone decarboxylase OS=Acinetobacter sp. (strain ADP1) GN=pcaC PE=4 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.430e-31
Identity = 57/108 (52.78%), Postives = 85/108 (78.70%), Query Frame = 2 
Query:   14 GNSRVDRSLNALTEFNSEFQEMITRHAWGDIWTRPGLPRHTRSLITIAMLIGMNRTEELKLHLRAAASNGVTRAEIKEVLMQSAIYCGIPAANATFHLAESVWDELGV 337
            G   V+RSL  L +FN +FQ  I+R AWG++W+RPGLPRHTRSL+TIA+L+ + R +EL++HLRA  +NGVT+ E+KE+++  ++Y G+PA+NA  H+AE V+ +LG+
Sbjct:   19 GEKHVNRSLENLNDFNQDFQNFISRFAWGEVWSRPGLPRHTRSLVTIAVLLALGREDELRMHLRACFNNGVTKDELKELILHCSLYAGLPASNAAMHMAEEVFKDLGI 126
The following BLAST results are available for this feature:
BLAST of EY728209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DC4C_ACIAD1.430e-3152.784-carboxymuconolactone decarboxylase OS=Acinetobac... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-H07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728209 ID=EY728209; Name=EY728209; organism=Citrus sinensis; type=EST; length=956bp
GTTACCGGGTCCCGGGAATTCCCGGGTCGACCGCAGCCTCAACGCCCTGA
CCGAATTCAACAGCGAGTTCCAGGAAATGATCACCCGCCACGCCTGGGGT
GATATCTGGACCCGCCCGGGCCTGCCGCGGCATACCCGCAGCCTGATCAC
CATCGCCATGCTGATCGGCATGAACCGCACCGAAGAGCTGAAGCTGCACC
TGCGGGCCGCCGCGAGCAACGGCGTGACCCGCGCCGAGATCAAGGAAGTG
CTGATGCAGAGCGCAATCTACTGCGGGATCCCGGCGGCGAATGCGACGTT
TCATTTGGCTGAGTCGGTGTGGGATGAGTTGGGGGTTGAATCGCGCGATC
CAGTCTGATTGAACCCCCGCAGGACGCGTCTGCTATGTGTACTGGGTGCG
TAACGGGCGGCCCATTTCCTCTCGGAGAGCATTTTCCGTAAAGGGCTTGG
GATTGGTTGTCGTGGGTTCGGTTGATCGATGATTGTCGAAATCAAAAGGC
ACCGCAATCGTAGGCAGGCCTAACAGCTTGCCCGTTCGGGGTTGGGTTCG
CCCCCCGGGGTCTCCGGGATGCCGGTATCGCCTTTCGAAAAAAGGTCCCC
GGGGGCCCCGTTTAAGGCATGGGCCATTTTCCTGGGAAAAGGGGGTTTGA
ACGGGGGGGGTGTTTTTCCTCCAAGGGGAGAAGAGAAGGGGTTGTAGGGG
AATTTTCCCCCAGCCTGGAAACCGCCGCCTCCTAGAGGAATCCAAGCTTT
TAGTATCCCGCGGGTTGGCAATAGTCTTACCTCTTTTGTATAGGGGGGCC
CATAAAATTTATTTCTTTTGGCCCTTGACTTTTTCAAACACATCACGAGC
AGGGAAAAACCAAAGGGAGTTTACCAACAATTTAATCTCCCATTGTCAAC
AACATCCTTACCTTTTTCTCCCAAATTGGGTGGGAAAAATACAAAAAAAT
AACCTC
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