GE213255

Overview
NameGE213255
Unique NameGE213255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length443
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7580 contig Csv1_Contig7580:370..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433_MESCR (14-3-3-like protein OS=Mesembryanthemum crystallinum GN=GBF PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 1.312e-67
Identity = 128/134 (95.52%), Postives = 131/134 (97.76%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGIL+LLESHLIPSAS+AESKVFYLKMKGDYHRYLAEFKTGAERKEAAE+TLLAYKSAQDIALAELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST
Sbjct:   90 YRGKIETELSKICDGILNLLESHLIPSASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 223          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433A_SOYBN (14-3-3-like protein A OS=Glycine max GN=GF14A PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 5.512e-66
Identity = 126/134 (94.03%), Postives = 130/134 (97.01%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGIL+LLES+LIPSA+S ESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALA+LAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST
Sbjct:   89 YRGKIEAELSKICDGILNLLESNLIPSAASPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 222          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14334_SOLLC (14-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 5.512e-66
Identity = 126/134 (94.03%), Postives = 131/134 (97.76%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YRSKIE +LSKICDGILSLLES+LIPSAS+AESKVF+LKMKGDYHRYLAEFKTG ERKEAAE+TLLAYKSAQDIALAELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST
Sbjct:   89 YRSKIEADLSKICDGILSLLESNLIPSASTAESKVFHLKMKGDYHRYLAEFKTGTERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 222          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 1.604e-65
Identity = 123/134 (91.79%), Postives = 130/134 (97.01%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGIL+LL+SHL+P+AS AESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL+AYKSAQDIALA+LAP HPIRLGLALNFSVFYYEILNSPDRAC+LAKQAFDEAISELDTLGEESYKDST
Sbjct:   88 YRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDST 221          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433_LILLO (14-3-3-like protein OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 2.094e-65
Identity = 123/134 (91.79%), Postives = 129/134 (96.27%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGIL LL+SHL+PS+++ ESKVFYLKMKGDYHRYLAEFK+GAERKEAAESTLLAYKSAQDIALAELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST
Sbjct:   91 YRGKIEAELSKICDGILKLLDSHLVPSSTAPESKVFYLKMKGDYHRYLAEFKSGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 224          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 1433E_TOBAC (14-3-3-like protein E OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 4.666e-65
Identity = 124/134 (92.54%), Postives = 129/134 (96.27%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGIL+LLESHLIP AS+AESKVFYLKMKGDYHRYLAEFKTGAERKEAAE+TLLAYKSAQDIALAELAP HPIRLGLALNFSVFYYEILNS DRACNLAKQAFD+AI+ELDTLGEESYKDST
Sbjct:   89 YRGKIEAELSKICDGILNLLESHLIPVASTAESKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSSDRACNLAKQAFDDAIAELDTLGEESYKDST 222          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14333_SOLLC (14-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 7.959e-65
Identity = 123/134 (91.79%), Postives = 128/134 (95.52%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YRSKIENELSKICDGIL LL+S LIPSA+S +SKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL AYK+AQDIA AELAP HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAI+ELDTLGEESYKDST
Sbjct:   92 YRSKIENELSKICDGILKLLDSKLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIASAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDST 225          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 7.959e-65
Identity = 120/134 (89.55%), Postives = 130/134 (97.01%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGIL LL+SHL+PS+++AESKVFYLKMKGDYHRYLAEFKTGAERKEAAEST++AYK+AQDIALA+LAP HPIRLGLALNFSVFYYEILNSPD+ACNLAKQAFDEAISELDTLGEESYKDST
Sbjct:   86 YRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDST 219          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 7.959e-65
Identity = 125/135 (92.59%), Postives = 130/135 (96.30%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGA-ERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGILSLLESHL+PSAS+AESKVFYLKMKGDYHRYLAEFKTGA ERKEAAE+TLLAYKSAQDIALAEL P HPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD+AI+ELDTLGEESYKDST
Sbjct:   87 YRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDYHRYLAEFKTGARERKEAAENTLLAYKSAQDIALAELTPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDST 221          
BLAST of GE213255 vs. ExPASy Swiss-Prot
Match: 14335_ARATH (14-3-3-like protein GF14 upsilon OS=Arabidopsis thaliana GN=GRF5 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 1.039e-64
Identity = 123/134 (91.79%), Postives = 129/134 (96.27%), Query Frame = 2
Query:   23 YRSKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPAHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDST 424
            YR KIE ELSKICDGIL+LLE+HLIP+AS AESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTL+AYKSAQDIALA+LAP HPIRLGLALNFSVFYYEILNS DRAC+LAKQAFDEAISELDTLGEESYKDST
Sbjct:   90 YRGKIETELSKICDGILNLLEAHLIPAASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDST 223          
The following BLAST results are available for this feature:
BLAST of GE213255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433_MESCR1.312e-6795.5214-3-3-like protein OS=Mesembryanthemum crystallin... [more]
1433A_SOYBN5.512e-6694.0314-3-3-like protein A OS=Glycine max GN=GF14A PE=2... [more]
14334_SOLLC5.512e-6694.0314-3-3 protein 4 OS=Solanum lycopersicum GN=TFT4 P... [more]
14337_ARATH1.604e-6591.7914-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
1433_LILLO2.094e-6591.7914-3-3-like protein OS=Lilium longiflorum PE=2 SV=... [more]
1433E_TOBAC4.666e-6592.5414-3-3-like protein E OS=Nicotiana tabacum PE=2 SV... [more]
14333_SOLLC7.959e-6591.7914-3-3 protein 3 OS=Solanum lycopersicum GN=TFT3 P... [more]
14333_ORYSJ7.959e-6589.5514-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14331_SOLTU7.959e-6592.5914-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
14335_ARATH1.039e-6491.7914-3-3-like protein GF14 upsilon OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank description105 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>GE213255 ID=GE213255; Name=GE213255; organism=Citrus sinensis; type=EST; length=443bp
ATTAGCGTGGTCGCGGCCGAGGTACAGGAGCAAGATTGAGAATGAGCTCA
GCAAGATCTGTGATGGGATTCTTAGCCTCCTTGAGTCTCATCTCATTCCC
TCTGCCTCATCGGCTGAGTCTAAGGTGTTCTACCTGAAGATGAAGGGTGA
TTACCACAGGTATTTGGCTGAGTTCAAGACTGGAGCTGAGAGGAAGGAAG
CTGCGGAGAGCACTTTGTTGGCCTACAAGTCAGCTCAGGATATTGCTTTA
GCTGAATTGGCCCCTGCTCACCCCATAAGGCTGGGACTTGCACTCAACTT
CTCTGTGTTCTACTATGAAATCCTTAACTCACCAGATCGTGCATGCAATC
TTGCGAAGCAGGCTTTTGATGAGGCCATTTCTGAGCTTGATACCTTGGGT
GAAGAATCATACAAGGACAGTACCTGCCCGGGCGGCCGCTCGA
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