EY728164

Overview
NameEY728164
Unique NameEY728164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1056
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728164 vs. ExPASy Swiss-Prot
Match: VP322_ARATH (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana GN=VPS32.2 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.591e-42
Identity = 100/158 (63.29%), Postives = 107/158 (67.72%), Query Frame = 2 
Query:  104 MFTRLFGKPKQETNALTTLDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDGDKTMG*NSWSRPRT*SQIPEAFINSYWGLPADFDED 577
            M  RLFGKPKQE NAL TLD                          AK+YS+AKNKRAAIQCLKRKRLYE Q+EQLGNFQLRIHDQMIMLEGAKATTETVDALR+GAS MKAMQKATNIDD DKTM      +     QI EA + +  G  ADFDED
Sbjct:    1 MMNRLFGKPKQEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMD-EINEQTENMKQIQEA-LATPMGAAADFDED 156
[Close]
BLAST of EY728164 vs. ExPASy Swiss-Prot
Match: VP321_ARATH (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana GN=VPS32.1 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.759e-41
Identity = 99/158 (62.66%), Postives = 110/158 (69.62%), Query Frame = 2 
Query:  113 RLFGKPKQETNALTTLDXXXXXXXXXXXXXXXXXXXXXXXXXXAKDYSKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASTMKAMQKATNIDDGDKTMG*NSWSRPRT*SQIPEAFINSYWGLPADFDEDGIE 586
            RLFGKPKQET+ L TLD                          AK++S+AKNKRAAIQCLKRKRLYEQQ+EQLGNFQLRIHDQMIMLEGAKATTETVDALRTGAS MKAMQKATNIDD DKTM      +     QI EA +++ +G   DFDED +E
Sbjct:    5 RLFGKPKQETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMD-EINEQTENMKQIQEA-LSAPFG-ANDFDEDELE 159
The following BLAST results are available for this feature:
BLAST of EY728164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
VP322_ARATH1.591e-4263.29Vacuolar protein sorting-associated protein 32 hom... [more]
VP321_ARATH1.759e-4162.66Vacuolar protein sorting-associated protein 32 hom... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-D02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728164 ID=EY728164; Name=EY728164; organism=Citrus sinensis; type=EST; length=1056bp
ATTCCCCGGGGGTCGAACCCACGCGTCCGATTTTTTTTTTCCCTCATTTT
TATAATTACAGAGGTAAAATCGAGGGTTTTTGATTAATCGCGGAGAATCA
AACATGTTTACTCGGCTTTTTGGAAAACCTAAACAGGAAACCAATGCCTT
AACCACGCTCGATAAGCTAAATGAAACTCTTGAAATGCTAGAGAAAAAGG
AGAAAGTACTCCTGAAAAAGGCTTCTGTAGAGGTTGAAAAGGCCAAGGAC
TACTCCAAAGCAAAGAACAAAAGAGCGGCCATACAATGTTTGAAGAGGAA
GAGGCTATACGAACAGCAAATAGAGCAGCTTGGGAATTTCCAATTGCGCA
TTCATGATCAGATGATAATGCTAGAAGGTGCTAAAGCCACAACTGAGACT
GTAGATGCATTGAGGACGGGAGCATCGACAATGAAAGCTATGCAGAAAGC
AACGAACATAGATGATGGGGATAAAACCATGGGATGAAATTCATGGAGCA
GACCGAGAACATGAAGCCAAATTCCAGAAGCCTTTATCAACTCCTATTGG
GGGCTGCCTGCTGATTTCGATGAAGATGGAATTGAAAACAAAACTTTGAA
AAACGGGGAAAGGGTGCTGAATTGGGAAAAAAAAGATTCTTACAGCAAAG
CTAAAAAAAGTTCCTGGTTGCCCCCGGGGTTAAGGGGTCCCTTGGTGGGC
GGGGAAAAAAACCCCCTCCCTGGTTTCCCAAAAAAAAAGACCAAAAAATA
GTAAAAAAAAAAAAAAAACTTTGGGTGATCTTTAACCAAACTCGAAAAAG
AGGGTCTCTTTTAAAACCGAGGGGTTTTTTTCCCCCCCCCTTTAAATAGA
AAAAAAATTTTATATTTTTAAAATAACCGTGGGGGGCCCAAATAAAATGG
GGGGGGGAAAAATTTTTTATGCGCCCCACCCTGTTTGAAATTTTAAACCC
TTTTCCACAAAAAAATTTCTGGTCGGGGTGGGGTGCGGCTATTTTTAAAG
AGAAGAAAAACCNAAAAAACCGGTGGATATATTAATATAAATAGGGTGTT
TTGGTG
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