EY728163

Overview
NameEY728163
Unique NameEY728163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728163 vs. ExPASy Swiss-Prot
Match: TPO4_YEAST (Polyamine transporter 4 OS=Saccharomyces cerevisiae GN=TPO4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.560e-12
Identity = 63/190 (33.16%), Postives = 87/190 (45.79%), Query Frame = 3 
Query:   48 PIVGGFVEQYTFWQWNIWIQLIFGGVIQAIHFFTVPETRTSIMMNRIAKKRRKEGNPNIWGPDELVPFKDRFSAKEVLITWIRPFKMFLTEPIVLVLSLLSGFSDALIFMFIQSFLA---GV--QAMELRGLPG---------RSGFLFYWCRKPCRLGLVHPCPQKQY*GTVKTIPKEQTSASTSPRLG 575
            PI+ GF  +   W+W+ WIQLI GG+I       +PET   I++ + AKKR      NI         +  F    V IT +RP KM + EPIV V S+   F  A++F F +++     GV   +M + GLP           + F  Y  RK      + P P     GT     KE+TS  T+P  G
Sbjct:  233 PIMAGFATEAKGWRWSEWIQLIAGGLILPF-IALMPETHKGIILRKRAKKR------NIALKKFSREAQKEFLKTTVTITILRPLKMLVVEPIVFVFSVYVAFIFAILFGFFEAYAVIYRGVYHMSMGISGLPFIGIGVGLWIGAFFYLYIDRK-----YLFPKPPA---GTQPLTEKERTSKRTTPYRG 407
The following BLAST results are available for this feature:
BLAST of EY728163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TPO4_YEAST7.560e-1233.16Polyamine transporter 4 OS=Saccharomyces cerevisia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-C11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728163 ID=EY728163; Name=EY728163; organism=Citrus sinensis; type=EST; length=973bp
CTGTCGCTTATGTCGTCTTTTCTTCCGTTGGTGGATCCGTGCTTGGACCT
ATCGTCGGTGGCTTTGTTGAGCAGTATACGTTCTGGCAATGGAACATCTG
GATCCAGCTCATCTTCGGCGGCGTCATCCAAGCCATCCACTTCTTCACCG
TCCCCGAAACCCGTACCTCGATCATGATGAACCGCATCGCCAAGAAACGC
AGAAAGGAGGGCAACCCCAACATCTGGGGCCCAGACGAGCTGGTGCCATT
CAAGGACCGTTTCTCCGCGAAAGAAGTCCTCATCACATGGATCCGTCCTT
TCAAGATGTTCTTGACCGAGCCTATTGTCCTGGTACTCTCCTTGCTCTCC
GGATTCTCCGACGCTCTGATCTTCATGTTCATCCAGTCCTTTCTCGCTGG
TGTACAAGCAATGGAACTTCGAGGTCTACCAGGTCGGTCTGGCTTTCTGT
TCTATTGGTGTCGGAAACCTTGTCGGCTGGGCCTGGTTCATCCCTGCCCT
CAAAAGCAATATTAAGGGACCGTGAAAACAATCCCCAAAGAACAAACGAG
CGCCAGTACAAGTCCCCGCCTGGGGTTCTTTGTTGTAACACAGCTCCTTT
GCCTTTCCTAAAAGGTCTAAATAGGCTTTTGCCCGGGAACAATTTAAGGG
GACGCACCAATTTCATTGGAAAAGGGCCCACAAAAATTTTTGGATGGTAA
TCCGTTTGGAAATTGGCCCAAATTTCCCCTATTCACCAGGGGGCCACAAT
ATTGAAAAAACTGGGTAAGGGACGAAAAAAAGGACCCAAAACCCAGCCCC
AAGGGCAAAGAGGGGAGGAATAAAGGGTGGGTGCTATGTGAAATATTTTT
GGGAGGGGGGGGGTGCAACCACAGGGAACGCGGACAAACACAATATAATT
TTACCACCAAACAAAAATTTGGAAAAAAAGAATAAAGAAGGAGGGAATAG
AAAAAAACTGGGAAGAAAATAAA
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