EY728156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KDM3B_MOUSE (Lysine-specific demethylase 3B OS=Mus musculus GN=Kdm3b PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 9.017e-17 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 101 EINIFQFFKGY---LEGRRYRNGWPGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTH 442 ++ + F+ G+ + R +G P +LKLKDWPP F + +P + + LP +YT + G LNLA++LP+ ++PDLGPK Y AYG R T LH D+SDAVNV+ + Sbjct: 1257 DVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY 1373
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KDM3B_HUMAN (Lysine-specific demethylase 3B OS=Homo sapiens GN=KDM3B PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 9.017e-17 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 2 Query: 101 EINIFQFFKGY---LEGRRYRNGWPGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTH 442 ++ + F+ G+ + R +G P +LKLKDWPP F + +P + + LP +YT + G LNLA++LP+ ++PDLGPK Y AYG R T LH D+SDAVNV+ + Sbjct: 1456 DVKVRDFWDGFEIICKRLRSEDGQPMVLKLKDWPPGEDFRDMMPTRFEDLMENLPLPEYTK-RDGRLNLASRLPSYFVRPDLGPKMYNAYGLITAEDRRVGTTNLHLDVSDAVNVMVY 1572
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KDM3A_CHICK (Lysine-specific demethylase 3A OS=Gallus gallus GN=KDM3A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.633e-16 Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = 2 Query: 146 RYRNGWPGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVKIPPWQQKNHLK 490 R G P +LKLKDWPP F + +P + + +P +YT + G LNLA++LP ++PDLGPK Y AYG R T LH D+SDA NV+ + K Q++ LK Sbjct: 1038 RTEEGEPMVLKLKDWPPGEDFRDMMPSRFDDLMKNIPLPEYTR-RGGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGIPKGQADQEEEVLK 1152
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KDM3A_RAT (Lysine-specific demethylase 3A OS=Rattus norvegicus GN=Kdm3a PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 9.969e-16 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 164 PGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVKIPPWQQKNHLKIYR 499 P +LKLKDWPP F + +P + +A +P +YT + G LNLA++LP ++PDLGPK Y AYG R T LH D+SDA NV+ + V IP Q + ++ R Sbjct: 926 PMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY---VGIPKGQCEQEEEVLR 1034
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KDM3A_MOUSE (Lysine-specific demethylase 3A OS=Mus musculus GN=Kdm3a PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 9.969e-16 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 164 PGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVKIPPWQQKNHLKIYR 499 P +LKLKDWPP F + +P + +A +P +YT + G LNLA++LP ++PDLGPK Y AYG R T LH D+SDA NV+ + V IP Q + ++ R Sbjct: 1042 PMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY---VGIPKGQCEQEEEVLR 1150
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KDM3A_HUMAN (Lysine-specific demethylase 3A OS=Homo sapiens GN=KDM3A PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 1.302e-15 Identity = 46/110 (41.82%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 164 PGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVKIPPWQQKNHLK 490 P +LKLKDWPP F + +P + +A +P +YT + G LNLA++LP ++PDLGPK Y AYG R T LH D+SDA NV+ + K Q++ LK Sbjct: 1040 PMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTR-RDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGIPKGQCEQEEEVLK 1148
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KD3AA_XENLA (Lysine-specific demethylase 3A-A OS=Xenopus laevis GN=kdm3a-A PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 4.188e-14 Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = 2 Query: 119 FFKGYLE-GRRYRN--GWPGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVKIPPWQQKNHLKIYR 499 F++G+ + R +N G +LKLKDWPP F + + + + +P +YT + G LNLA +LPA ++PDLGPK Y AYG R T LH D+SDA NV+ + V IP + ++ R Sbjct: 1032 FWEGFEDISARLKNDKGEAMVLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPAYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDATNVMVY---VGIPKGEHDQEQEVIR 1158
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: JHD2C_HUMAN (Probable JmjC domain-containing histone demethylation protein 2C OS=Homo sapiens GN=JMJD1C PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 5.470e-14 Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 59 HKVKAIDCLEWCEVEINIFQFFKGYLE-GRRYRN--GWPGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVK 457 H+ ++C + N+ +F+ G+ E +R +N G +LKLKDWP F+ +P + + LP +Y +P+ G NLA+ LP ++PDLGP+ AYG T LH ++SD VN+L + K Sbjct: 2218 HQADLLNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDVVNILVYVGIAK 2353
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: KD3AB_XENLA (Lysine-specific demethylase 3A-B OS=Xenopus laevis GN=kdm3a-B PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.079e-13 Identity = 43/111 (38.74%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 170 MLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVKIPPWQQKNHLKIYR 499 +LKLKDWPP F + + + + +P +YT + G LNLA +LP ++PDLGPK Y AYG R T LH D+SDA NV+ + V IP + ++ R Sbjct: 1055 VLKLKDWPPGEDFRDTMLSRFEDLMNNIPLPEYTR-REGKLNLAARLPTYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVY---VGIPKGEHDQDQEVLR 1161
BLAST of EY728156 vs. ExPASy Swiss-Prot
Match: JHD2C_MOUSE (Probable JmjC domain-containing histone demethylation protein 2C OS=Mus musculus GN=Jmjd1c PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 2.715e-13 Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = 2 Query: 59 HKVKAIDCLEWCEVEINIFQFFKGYLE-GRRYRN--GWPGMLKLKDWPPSNSFEECLPRHGAEFIAMLPFADYTHPKSGPLNLATKLPAV-LKPDLGPKAYIAYGSSEELGRGDSVTKLHCDISDAVNVLTHTAEVK 457 H+ ++C + N+ +F+ G+ E +R +N G +LKLKD P F+ +P +F+ LP +Y +P+ G NLA+ LP ++PDLGP+ AYG + T LH + SD VNVL + K Sbjct: 2028 HQADLLNCKDSIVSNANVKEFWDGFEEVSKRQKNKGGETVVLKLKDCPSGEDFKAMMPTRYEDFLRCLPLPEYCNPE-GKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHIEASDVVNVLVYVGIAK 2163 The following BLAST results are available for this feature:
BLAST of EY728156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY728156 ID=EY728156; Name=EY728156; organism=Citrus sinensis; type=EST; length=1074bpback to top |