GE213252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_BOVIN (Prefoldin subunit 6 OS=Bos taurus GN=PFDN6 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.404e-19 Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = -3 Query: 253 KLQKDIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 576 +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPV VKQ+L E A V KR++YI AE+K ++ +DLE++ ++E + ++QQ Q QA KA A Sbjct: 18 QLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLEQQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_HUMAN (Prefoldin subunit 6 OS=Homo sapiens GN=PFDN6 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.263e-18 Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = -3 Query: 253 KLQKDIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 576 +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPV VKQ+L E A V KR++YI AE+K ++ +DLE + ++E + ++QQ Q QA KA A Sbjct: 18 QLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_CANFA (Prefoldin subunit 6 OS=Canis familiaris GN=PFDN6 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.263e-18 Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = -3 Query: 253 KLQKDIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 576 +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPV VKQ+L E A V KR++YI AE+K ++ +DLE + ++E + ++QQ Q QA KA A Sbjct: 18 QLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKAGA 125
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_MOUSE (Prefoldin subunit 6 OS=Mus musculus GN=Pfdn6 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.154e-18 Identity = 47/106 (44.34%), Postives = 69/106 (65.09%), Query Frame = -3 Query: 259 KLQKDIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQSLQAGKA 576 +LQKD+ K+ R+K QL EN +V +EL LL+ V+KL+GPV VKQ+L E A V KR++YI AE+K ++ +DLE + ++E + ++QQ Q QA KA Sbjct: 18 QLQKDLSKSMSGRQKLEAQLTENNIVKEELALLDGSNVVFKLLGPVLVKQELGEARATVGKRLDYITAEIKRYESQLRDLERQSEQQRETLAQLQQEFQRAQAAKA 123
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_DROME (Probable prefoldin subunit 6 OS=Drosophila melanogaster GN=CG7770 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.725e-13 Identity = 44/98 (44.90%), Postives = 55/98 (56.12%), Query Frame = -3 Query: 280 LQKDIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQ 573 LQK K + R QL EN+ VL EL LL VYKL GPV VKQ+L E NV KRIEYI ELK +++E+ +E++ K QQ+ Q Sbjct: 22 LQKSCLKMVKQRAVLESQLNENKCVLDELNLLGPDNKVYKLFGPVLVKQELEESRQNVGKRIEYISKELKSSTDALENMEKDMLKHRESVAKYQQQCQ 119
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_CAEEL (Probable prefoldin subunit 6 OS=Caenorhabditis elegans GN=pfd-6 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.559e-13 Identity = 39/114 (34.21%), Postives = 67/114 (58.77%), Query Frame = -3 Query: 253 KANDLSKLQKDIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQSLQAGKAKA 594 + N L L+KD K R++ ++L E++ V EL L+ + VYKLIG V V+QDL E + V KR+E+I +E K ++A+ D+ +K +++ + +Q+ Q + A+A Sbjct: 10 EVNKLRTLEKDREKYFTSRQEMEMRLTESKNVKAELDLMESDSKVYKLIGAVLVRQDLEEARSTVEKRLEFIDSETKRVEASISDISKKCTEQRDKVMNMQKSFQMMAQAAAQA 123
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_CAEBR (Probable prefoldin subunit 6 OS=Caenorhabditis briggsae GN=pfd-6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.929e-13 Identity = 36/103 (34.95%), Postives = 65/103 (63.11%), Query Frame = -3 Query: 274 LSKLQKDIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQSL 582 L L+KD K R++ ++L E++ V EL L++ + VYKL+GPV V+QDL E + V KR+E+I +E+K ++A+ D+ +K +++ + +Q+ Q + Sbjct: 14 LKTLEKDREKYFSSRQEMEMRLTESKNVKAELDLMDSDSKVYKLMGPVLVRQDLEEARSTVEKRLEFIESEIKRVEASITDVNKKSIEQRDKVMNMQKAFQMM 116
BLAST of GE213252 vs. ExPASy Swiss-Prot
Match: PFD6_DICDI (Probable prefoldin subunit 6 OS=Dictyostelium discoideum GN=pfdn6 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.013e-12 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = -3 Query: 268 KANDLSKLQK-DIGKNHQVRKKYPIQLGENELVLKELGLLNEGANVYKLIGPVFVKQDLAEGNANVRKRIEYIFAELKGLDATFQDLEEKQNSKKEAIFKVQQRIQSLQA 594 KA D ++ + ++ K R K QL ENE+V KE LL A +YKL GPV KQ E + R++ I LK ++ F+D+E+K ++ IF+ Q +I+SL A Sbjct: 24 KARDAFQVHETELQKLSASRSKLLTQLNENEMVKKEFDLLESEAKIYKLNGPVLFKQTKEEAENTITSRLDIINNNLKTIETNFKDIEKKAMEQRNKIFEYQNKIRSLTA 133 The following BLAST results are available for this feature:
BLAST of GE213252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213252 ID=GE213252; Name=GE213252; organism=Citrus sinensis; type=EST; length=653bpback to top |