EY728147

Overview
NameEY728147
Unique NameEY728147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB50_ARATH (Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana GN=PUB50 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.011e-43
Identity = 104/227 (45.81%), Postives = 142/227 (62.56%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI-CDQLNVRSDIRAFGTLLLHLLTGRNWAGLVEEAMALDQTTLMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADGLADKRESEVVTDRCANKEDSNDVPSVFIGPHISGSEENPPRGCRRDFSYQFGNLWEDWLGDGGMDTPPLEKFWRAQGTNIR------TPTHTL 662
            FLHS +P+PIVHG LTPS ILLDRNLV KI+G GL +  DQ + + D+ AFG LLLHLLTGRNW GL++ AM+++QT++++ LD  AG WPLELA E   +A+KC S ++  N D     +M+EL ++R+KAD    K   E  T+   ++ D ND+PSVF+ P +    +N P      FSY+   + ++WL   G DT P+        TN+R      TP HTL
Sbjct:  534 FLHSVKPKPIVHGRLTPSKILLDRNLVPKITGFGLIMHSDQSDTKPDVMAFGVLLLHLLTGRNWHGLLK-AMSMNQTSILRDLDQTAGKWPLELAKEFGALAVKCSSVNRGGNMDFSTKEIMEELGKIREKADEFKTKGGYEEATNSNMDEGDPNDIPSVFMCPILQEVMKN-PHVAADGFSYELEAI-QEWL-SMGHDTSPM--------TNLRLDYQMLTPNHTL 748          
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 5.938e-18
Identity = 55/161 (34.16%), Postives = 78/161 (48.45%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG---------------------------LNICDQLNVRSDIRAFGTLLLHLLTGRNWAGLVEEA-MALDQTTLMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADG 401
            FLHS +   +VHG L P++ILLD NLV+K+S  G                            +   +L  +SD+ +FG +LL LLTGR    +  E   ALD  TL  +LD  AG WP   A++LA +AL+C     +   DL    V + L+ +R  + G
Sbjct:  590 FLHSNKAHSLVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGRPALRISNEVKYALDNGTLNDLLDPLAGDWPFVQAEQLARLALRCCETVSENRPDLG-TEVWRVLEPMRASSGG 749          

HSP 2 Score: 33.113 bits (74), Expect = 5.938e-18
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 1
Query:  478 FLLAPIFQEVKKTPHVAADG 537
            + + PIFQEV + PHVAADG
Sbjct:  766 YFICPIFQEVMQDPHVAADG 785          
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB32_ARATH (U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.923e-16
Identity = 74/241 (30.71%), Postives = 113/241 (46.89%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN--------------------ICDQLNVRSDIRAFGTLLLHLLTGRNWAGLVEEA-MALDQTTLMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADGLADKRESEVVTDRCANKEDSNDVPSVFIGPHISGSEENPPRGCRRDFSYQFGNLWEDWLGDGGMDTPPLEKFWRAQGTNIRTPTHTL 662
            FLHS  P  I+HG+L PS ILLD NLV KI+  G++                    +  ++ + SDI AFG +LL LLT R  +G++ +   AL+   +  VLD +AG WP+    +LA +A++C   +     DL +  V++ +D  R KA  +         T   AN+      PS ++ P I       P      F+Y+      +WL + G DT P+    + +  N+  P H L
Sbjct:  569 FLHSNIPC-IIHGNLKPSKILLDSNLVTKINDYGISQLIPIDGLDKSDPHVDPHYFVSREMTLESDIYAFGIILLQLLTRRPVSGILRDVKCALENDNISAVLDNSAGDWPVARGKKLANVAIRCCKKNPMNRPDLAV--VLRFID--RMKAPEVPSSE-----TSSYANQNVPRRPPSHYLCP-IFQEVMKDPLIAADGFTYE-AEAIREWLAN-GHDTSPMTNL-KMEDCNL-IPNHAL 794          
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.553e-15
Identity = 65/200 (32.50%), Postives = 90/200 (45.00%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNV-------------------------------RSDIRAFGTLLLHLLTGRNWAGL---VEEAMALDQTTLMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDL--RIAGVMKELDEV-----RKKADGLADKRESEVVTDRCANKEDSNDVPSV 479
            FLH+ EPRPIVH  L P++ILLDRN V+KI  +GL+    L+                                 SDI AFG +LL L+T R+  GL   +E+A+        ++LD  AG WP++ A E+  I L+C    +    DL   I  V++ L EV        AD L D   +      C   +D  + P V
Sbjct:  544 FLHTNEPRPIVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTARSAMGLAHSIEKALRDQTGKFTEILDKTAGDWPVKEAKEMVMIGLRCAEMRKRDRPDLGKEILPVLERLKEVASIARNMFADNLIDHHHNAPTHFYCPITKDVMENPCV 743          
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.091e-13
Identity = 55/170 (32.35%), Postives = 83/170 (48.82%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQ---------------------------------LNVRSDIRAFGTLLLHLLTGRNWAGL---VEEAMALDQTT-LMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDL--RIAGVMKELDEVRKKA 395
            FLH ++P PI+H  L P++ILL+ N V+K+  +GL+   Q                                 ++ +SD+ AFG ++L LLTG+    L   VE AM  +    L+Q+LD  AG WP+E   +LA +AL+C         DL  +I  V++ L +V  KA
Sbjct:  569 FLHKSKPTPIIHRDLKPANILLNHNFVSKVGDVGLSTMIQAADPLSTKFTMYKQTSPVGTLCYIDPEYQRTGRISPKSDVYAFGMIILQLLTGQQAMALTYTVETAMENNNDDELIQILDEKAGNWPIEETRQLAALALQCTELRSKDRPDLEDQILPVLESLKKVADKA 738          
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB34_ARATH (U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.425e-13
Identity = 55/160 (34.38%), Postives = 79/160 (49.38%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL-------------------------------NICDQLNVRSDIRAFGTLLLHLLTGRNWAGLVEEAM-ALDQTTLMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDLR--IAGVMKELDE 380
            FLHS++P PIVH  L P +ILL+RN V+KI+ +GL                               +    +  +SD+ AFG ++L LLT RN +G+V     A+ + TL ++LD +   WPL   +ELA I LKC         DL+  +  V+K L E
Sbjct:  551 FLHSSKPEPIVHRDLKPGNILLNRNYVSKIADVGLAKLVTDVAPDNVTMYRNSVLAGTLHYIDPEYHRTGTIRPKSDLYAFGIIILQLLTARNPSGIVPAVENAVKKGTLTEMLDKSVTDWPLAETEELARIGLKCAEFRCRDRPDLKSEVIPVLKRLVE 710          
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 7.070e-13
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQ--------------------------------LNVRSDIRAFGTLLLHLLTGRNWAGL---VEEAMALDQTTLMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDLR--IAGVMKELDEVRKKA 395
            FLH ++P+PI+H  L P++ILLD N V+K+  +GL+   Q                                ++ +SDI +FG +LL LLT +    L   VE AM  +   L ++LD  AG WP+E   ELA +AL C         DL+  I   ++ L +V +KA
Sbjct:  589 FLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAIALTHFVESAMDSNDEFL-KILDQKAGNWPIEETRELAALALCCTELRGKDRPDLKDQILPALENLKKVAEKA 755          
BLAST of EY728147 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.206e-12
Identity = 71/257 (27.63%), Postives = 105/257 (40.86%), Query Frame = 3
Query:    3 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN----------------------IC---------DQLNVRSDIRAFGTLLLHLLTGRNWAGL---VEEAMALDQTTLMQVLDGNAGIWPLELADELAGIALKCLSADQDANRDLR--IAGVMKELDEVRKKADGLADKRESEVVTDRCANKEDSNDVPSVFIGPHISGSEENPPRGCRRDFSYQFG-NLWEDWLGDGGMDTPPLEKFWRAQGTNIRTPTHTL 662
            FLH ++PRPI+H  L P +ILLD N V+K+  +GL+                      +C           ++ +SD+ + G ++L L+T +    +   VEEA+  D    M +LD  AG WP+    ELA + L C    +    DL+  I   ++ L +V  KA  L  +  S                PS FI P + G    P   C     Y +     E+WL     DT P+        TN+  P   L
Sbjct:  599 FLHKSKPRPIIHRDLKPGNILLDHNFVSKLGDVGLSTMVNQDDVSSRTIFKQTSPVGTLCYIDPEYQRTGIISPKSDVYSLGVVILQLITAKPAIAITHMVEEAIG-DDAEFMAILDKKAGSWPISDTRELAALGLCCTEMRRRDRPDLKDQIIPALERLRKVADKAQNLLSRTPS--------------GPPSHFICPLLKGVMNEP---CVAADGYTYDREAIEEWLRQ--KDTSPV--------TNLPLPNKNL 827          
The following BLAST results are available for this feature:
BLAST of EY728147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PUB50_ARATH1.011e-4345.81Putative U-box domain-containing protein 50 OS=Ara... [more]
PUB33_ARATH5.938e-1834.16U-box domain-containing protein 33 OS=Arabidopsis ... [more]
PUB32_ARATH8.923e-1630.71U-box domain-containing protein 32 OS=Arabidopsis ... [more]
PUB51_ARATH7.553e-1532.50U-box domain-containing protein 51 OS=Arabidopsis ... [more]
PUB53_ARATH1.091e-1332.35Putative U-box domain-containing protein 53 OS=Ara... [more]
PUB34_ARATH1.425e-1334.38U-box domain-containing protein 34 OS=Arabidopsis ... [more]
PUB35_ARATH7.070e-1332.74U-box domain-containing protein 35 OS=Arabidopsis ... [more]
PUB52_ARATH1.206e-1227.63U-box domain-containing protein 52 OS=Arabidopsis ... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-B03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728147 ID=EY728147; Name=EY728147; organism=Citrus sinensis; type=EST; length=993bp
ACTTCCTCCATTCGACTGAGCCCAGGCCCATTGTTCACGGCAGCCTCACG
CCGTCGAGTATCCTTCTCGATCGTAATCTTGTTGCGAAGATCAGTGGGCT
TGGGCTCAATATATGTGACCAGCTCAATGTGAGATCGGATATTAGGGCTT
TTGGGACGTTATTGCTGCATCTCTTAACTGGAAGAAACTGGGCTGGGCTT
GTCGAGGAGGCGATGGCGTTGGATCAAACGACCCTGATGCAAGTTTTGGA
TGGGAATGCTGGAATATGGCCGTTGGAATTGGCGGATGAACTTGCAGGGA
TTGCCTTGAAGTGTTTGTCGGCGGACCAAGACGCCAATAGAGATTTGAGG
ATTGCTGGTGTTATGAAAGAGCTTGACGAAGTGCGGAAAAAGGCTGATGG
TTTAGCGGACAAAAGAGAAAGTGAAGTGGTGACTGATAGATGTGCAAATA
AAGAAGATTCAAATGACGTCCCAAGTGTTTTTATTGGCCCCCATATTTCA
GGAAGTGAAGAAAACCCCCCACGTGGCTGCCGACGGGATTTTTCGTACCA
ATTTGGAAACCTATGGGAGGATTGGTTAGGGGATGGGGGCATGGATACTC
CCCCCTTGGAAAAATTTTGGAGGGCTCAAGGCACAAATATCCGAACCCCT
ACCCATACCCTTTTCTTTTCTCCCTTCCGGGGTGGGGAAAAAAAAAAAAA
TCAAGTGGGACTTTCTTTAAAAAAAAATACCCCACAGGGGGGCTGACTTT
TTGGCAAATTTTTCGGCTTGGAAAAAAAAAAACCAAAAAAAAATTTATTT
TTGCGTAAAAAAAAAAAAAAAGGGGGGGCCCCCCTCTAAAGAAACCCACC
TTTAACTACCCGCGGGGCCCGCGGAGCCCCTCAACCCTCTCTTTAAATGG
GGCACCCCCAAAAATTTATTTTTCCCGGGGGGGGCGGCCGGTTTTTTTCC
AACACGCCGCCGGAGGGGGGGGGGGGAAAAAAAACCCCGCGGG
back to top