EY728146

Overview
NameEY728146
Unique NameEY728146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1027
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728146 vs. ExPASy Swiss-Prot
Match: CTR1_ARATH (Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.801e-12
Identity = 38/75 (50.67%), Postives = 52/75 (69.33%), Query Frame = 3 
Query:  315 KVSLMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLPKEHNQTGLETAYSYGFG-NIARGVIYLPHCNP 536
            +V++MKRLRHPN++LFMGAVT P  L IVTE+L RGSL+RLL K   +  L+         ++A+G+ YL + NP
Sbjct:  596 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 670
The following BLAST results are available for this feature:
BLAST of EY728146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CTR1_ARATH2.801e-1250.67Serine/threonine-protein kinase CTR1 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-B02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728146 ID=EY728146; Name=EY728146; organism=Citrus sinensis; type=EST; length=1027bp
CCACGCGTCCGGCACCTGGGATTTTTCTTAAGCTTAATGTTTTTTGTATT
TAGATGGAAAAAGGAACAATCAAAATAAAATTTTCACGTGATAAAATGTG
TAATTCAGTGATCTACGTGTTATAGCAGGATGTGGCTGTCAAGGTATTCT
CTAGGCAGGAATATTCAGATGAAGTGATACATTCCTTCAGACAGGAGGTG
TGCTTTTGCATTGATTCCTCTAACTTGTGTATGATTATCGCTTGCTGTGA
ATTTCTTTCTCAATATAATTTGTTGCTTTTTTACTTGCCTTGTTTTTTCT
ATGGTTTGTCTATGAAGGTATCTCTGATGAAAAGACTTCGACATCCAAAT
GTTCTGTTGTTTATGGGTGCTGTGACCTCACCTCAGCGCCTATGCATTGT
TACTGAGTTCCTTCCACGAGGAAGTTTGTTTCGCTTGCTCCCAAAGGAAC
ACAACCAAACTGGACTGGAGACGGCGTATTCTTATGGCTTTGGGAATATA
GCACGTGGCGTGATTTATCTTCCTCATTGCAACCCCCACCAATCATTTCT
CGCGATTTGAAGTCCTCCAAATCTTTCAATTTAAAAAACCCGGGAACTGG
CAAGGTTGGGGGATTTTTGGTCCGGCACCGTCCCAAAGCATGAAACAAAT
CTCCCCCCACCCAAAATGGGGAAAGGGAAATTGGAAACTTTCCTTGGCTC
CCTGGACCTTTTATTTTTTTAACCCAAATGGAACCCCTTTTTCCTTTTTT
AAAAAAAGGGGTCCCCTGGCATTTTGAATTTTTACTTTGACCCCCCATCT
CAACCCCCATTTACCCCCCTTTTAACTTTTTTTAACCCCCCAAGGGGGGG
GGCCACCGGGAAAATTTCTCCCCAAAAAGAAAACCCCCCCCAAAAAAAAA
AAACTGTAAGAATGAAATAAATCCTATTTTTGGGGATATTATTTTATAAA
GGGGGGGGCCCCCCCCCCCCCCGCAGAAAAAAAAAACACCCCCTGTTGGG
GGGAGGAAAAAAAACCCCTCCCACCCC
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