EY728141

Overview
NameEY728141
Unique NameEY728141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728141 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.662e-11
Identity = 51/141 (36.17%), Postives = 67/141 (47.52%), Query Frame = 2 
Query:   95 EKRGPGNVNLLASPASMGSVCQKS-SVIKERNYMGLXXXXXXXXXXXXXXXXXXXXXXLNLKATELRLGLPGSQSPERGSELCLLGPAQLDEKPLFPLHPTGG*PLPITEECCFWK*KG-------GSLDAMDGFLRGEKS 493
            E+    NV++ +S  +   + + +   +KE NY+GL                      ++LKATEL LGLPGSQSP R +EL LL PA+LDEKP FPL       LP  +E C    K        G  D MD F   + S
Sbjct:    4 EEELQSNVSVASSSPTSNCISRNTLGGLKEHNYLGLSDCSSVGSSTLSPLAEDDKAT-ISLKATELTLGLPGSQSPARDTELNLLSPAKLDEKPFFPL-------LPSKDEICSSSQKNNASGNKRGFSDTMDQFAEAKSS 136
The following BLAST results are available for this feature:
BLAST of EY728141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IAA9_ARATH4.662e-1136.17Auxin-responsive protein IAA9 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-A07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728141 ID=EY728141; Name=EY728141; organism=Citrus sinensis; type=EST; length=940bp
TCTCCGGCAAGTGATCAACAAAACCAACCAGGTTGTACGGAATTAAAGTA
TCAGATTTTAGATTTTGATGTCTCCACCACCTGGTGTTGGTGAGGAGAAG
AGGGGTCCTGGCAATGTCAATTTACTGGCTTCTCCAGCCTCCATGGGCAG
CGTATGCCAAAAAAGCTCGGTAATAAAAGAGCGTAACTACATGGGATTAT
CAGACTCTTCTTCAATGGACAGCTCAGTGGTCTCCAGTGTCTCCGGTGAG
AGTAGCAAGAGCAGTCTGAATCTCAAGGCTACAGAGCTGAGGCTCGGACT
TCCTGGGTCCCAGTCTCCAGAGAGAGGTTCGGAACTCTGCCTCCTAGGTC
CTGCGCAACTGGATGAGAAACCATTGTTCCCTTTGCATCCAACAGGTGGA
TAGCCACTACCCATCACAGAAGAATGTTGTTTCTGGAAATAAAAGGGGGG
TTCTCTGGATGCTATGGATGGGTTTCTTAGAGGGGAAAAATCCTTTCTAG
TTCTGGACTTTTGTCACCCAGGGCTGCCTCCAACTTGGGGGCTGAAATCA
GTTCTATTCAAAAAAAACTTGGGCCCTCAAACCGCCAAAGGGGAAAAAAA
AGGGCAAACCAAAAAGCAGGTGAAAGGAAAGGCCCTCATGTTAAACAGAG
AAACCATAACAACCCTATTATGGTTCCTGCAAAAAACAAAATAGCCCGTG
GCCCCCTGGTGGCAAAGGCAAAGTGTTGGGGGGTTTGGGCCCCCCATTAT
AAACATTTAAAAAAAAAATTTTAATTGGCACCCTATTTAACTAAAATAAA
AAAGAATAAAAAATAAAAGGAAAAAAACAGGGAGCTCCCGAGAGCCTTGA
GTATAATTAAGTGAGAAAGAATGAGGAGGGGAATCAATTAAACAAAACAA
AAAAAAGAGCGATAAATAAAAAAAATATTACTATGCCAAA
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