EY728113

Overview
NameEY728113
Unique NameEY728113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1008
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728113 vs. ExPASy Swiss-Prot
Match: PARG1_ARATH (Poly(ADP-ribose) glycohydrolase 1 OS=Arabidopsis thaliana GN=PARG1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 7.739e-23
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 2
Query:   35 FCNKYIGGGALHRGCLQDEIRFMINPELIAGMLFLPSMADNEAIEVVGAERFCDYKGCVGMHR---RFVLRVIM-PTKGILTVLEYL*PGSLLLNALCSPGMKQY 337
            F NKY+GGG+L RGC+Q+EIRFMINPELIAGMLFLP M DNEAIE+VGAERF  Y G     R    ++ +  M P K   T +       + ++ALC+P M+ +
Sbjct:  256 FANKYLGGGSLSRGCVQEEIRFMINPELIAGMLFLPRMDDNEAIEIVGAERFSCYTGYASSFRFAGEYIDKKAMDPFKRRRTRI-------VAIDALCTPKMRHF 353          

HSP 2 Score: 27.335 bits (59), Expect = 7.739e-23
Identity = 12/32 (37.50%), Postives = 21/32 (65.62%), Query Frame = 3
Query:  357 RETIKAFCGFIDHSQYCQYKGLFQVKGLHESQ 452
            RE  KA CGF++ S+  +++ +F  +G +E Q
Sbjct:  360 REINKALCGFLNCSKAWEHQNIFMDEGDNEIQ 391          

HSP 3 Score: 22.3274 bits (46), Expect = 7.739e-23
Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 3
Query:    9 QSTDALEVDFATNILG 56
            Q  +ALEVDFA   LG
Sbjct:  247 QPDNALEVDFANKYLG 262          
BLAST of EY728113 vs. ExPASy Swiss-Prot
Match: PARG2_ARATH (Probable poly(ADP-ribose) glycohydrolase 2 OS=Arabidopsis thaliana GN=PARG2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.966e-13
Identity = 46/107 (42.99%), Postives = 58/107 (54.21%), Query Frame = 2
Query:   35 FCNKYIGGGALHRGCLQDEIRFMINPELIAGMLFLPSMADNEAIEVVGAERFCDYKGCVGMHRRFVLRVIMPTKGILTVLEYL*PGSLLLNALCSPGMKQYALKYLL 355
            F ++Y GG  L    LQ+EIRF+INPELIAGM+FLP M  NEAIE+VG ERF  Y    G    F           L +        + ++A+  PGM QY L  L+
Sbjct:  267 FADEYFGGLTLSYDTLQEEIRFVINPELIAGMIFLPRMDANEAIEIVGVERFSGY---TGYGPSFQYAGDYTDNKDLDIFRRRKTRVIAIDAMPDPGMGQYKLDALI 370          

HSP 2 Score: 20.7866 bits (42), Expect = 3.966e-13
Identity = 9/16 (56.25%), Postives = 10/16 (62.50%), Query Frame = 3
Query:    9 QSTDALEVDFATNILG 56
            Q  +ALEVDFA    G
Sbjct:  258 QPCEALEVDFADEYFG 273          
BLAST of EY728113 vs. ExPASy Swiss-Prot
Match: PARG_DROME (Poly(ADP-ribose) glycohydrolase OS=Drosophila melanogaster GN=Parg PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.970e-11
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 2
Query:   35 FCNKYIGGGALHRGCLQDEIRFMINPELIAGMLFLPSMADNEAIEVVGAERFCDYKGCVG 214
            F NKY+GGG L  GC+Q+EIRF+I PEL+ G LF   +   EA+ ++GAER+ +Y G  G
Sbjct:  368 FANKYLGGGVLGHGCVQEEIRFVICPELLVGKLFTECLRPFEALVMLGAERYSNYTGYAG 427          
The following BLAST results are available for this feature:
BLAST of EY728113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PARG1_ARATH7.739e-2352.38Poly(ADP-ribose) glycohydrolase 1 OS=Arabidopsis t... [more]
PARG2_ARATH3.966e-1342.99Probable poly(ADP-ribose) glycohydrolase 2 OS=Arab... [more]
PARG_DROME3.970e-1151.67Poly(ADP-ribose) glycohydrolase OS=Drosophila mela... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-110-G02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728113 ID=EY728113; Name=EY728113; organism=Citrus sinensis; type=EST; length=1008bp
ATAGACGACAATCCACCGATGCTCTTGAGGTAGATTTTGCAACAAATATA
TTGGGGGTGGTGCTCTTCATAGGGGCTGTTTGCAGGATGAGATTCGTTTC
ATGATCAATCCAGAATTAATTGCTGGGATGCTTTTCTTGCCTTCCATGGC
AGATAACGAGGCTATAGAAGTAGTTGGTGCTGAAAGATTCTGTGATTATA
AGGGTTGTGTAGGTATGCATCGTCGTTTCGTTTTGCGGGTGATCATGCCA
ACTAAAGGCATTTTGACAGTTTTGGAATACTTGTAACCAGGATCGTTGCT
ATTGAATGCATTATGCAGCCCTGGGATGAAACAATATGCACTAAAATACC
TTCTTTCGGGAGACAATTAAAGCCTTCTGTGGGTTCATTGATCATTCACA
ATATTGCCAATACAAAGGTTTATTTCAAGTCAAAGGACTTCATGAATCTC
AATCTTTTATCCGTATGATAAAGACCAAACATTCGAGGGAACATCTCCAA
GTTAAAAGAAGGTTCCCTCAAACTATGTTGAAACATTTCAAGGAACCTCC
TGAAAGTATACCCACCCATTAGAAAAACCTTCTAAAGGGAAAAGGAAAAA
AATTTTCCATGGGGAAAGGTAACAGAGAAACAGGGAGATGGGGTAGCATT
CTCCCGGGGCAAATACAAAAAAGAAAGCATAATAGAATGTGGAAGAGGAA
GGAATAACAAAAGGCAAAAAAAACTTATTGCTAATATAAAAAACAGAAAT
TTATGTCATATCAAATGCTTATTTTTAAAAACTACAAATAATTAGATAAT
GAAGATGGGATTACATGTTGGCGTAAGTAGAAATAAAATTTCCCAAATAA
ACAATTGGCGAAAATAATAGTAGGGATAGAGTATGATTCAACAAACAATA
AGAAAAACAGATTTTTAAGAATACTCATAAAATTAATGTATAGTATAATA
ATTCTTTATATACATCTGATGGATGCGATAGTAATTTAATTAATACGGTG
ATGTAATG
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