EY728103

Overview
NameEY728103
Unique NameEY728103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY728103 vs. ExPASy Swiss-Prot
Match: RL4_PRUAR (60S ribosomal protein L4 OS=Prunus armeniaca GN=RPL4 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.361e-13
Identity = 42/61 (68.85%), Postives = 47/61 (77.05%), Query Frame = 2 
Query:  101 AAAARPLVTVQSLEGDMATDASSTVPLPDVVKASIQHDIVSFDHSNI*KEQPQTLHRYKKS 283
            AAAARPLVTVQSLEGDMATD + TV LPDV+KASI+ DIV+F HSNI K   Q     KK+
Sbjct:    5 AAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSKKA 65
The following BLAST results are available for this feature:
BLAST of EY728103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RL4_PRUAR2.361e-1368.8560S ribosomal protein L4 OS=Prunus armeniaca GN=RP... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-110-F01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728103 ID=EY728103; Name=EY728103; organism=Citrus sinensis; type=EST; length=973bp
CAAGATAGACCCAAGCGACAACAAACTTAACGACTGCGGCTCTGCCCCCT
TCCCCATATATCCCCCAACAGAAAAAAACACACACAAACCAAAACCAATG
GCCGCCGCCGCCCGTCCTCTTGTAACCGTCCAGTCTTTGGAAGGTGACAT
GGCCACCGACGCAAGCTCCACCGTCCCCTTGCCCGATGTCGTGAAGGCCT
CTATCCAACACGACATCGTGAGCTTCGATCACTCTAACATCTAAAAAGAA
CAACCGCAAACCTTACACCGATACAAAAAAAGCAGGGCTGCAGAAATAAA
CCGAATCATGGGAGAAAGGTCGAGACAGATCACATATACCCAAAGTTCCC
GAAAGCAGAGCCCACAGCACCAGCCGGAGGAACGAAGGGCAAAAAAACAG
ACGGAGGAAGCGACAAGCAAAGAAAAAAAGAAAAACACAAAAAAAGAAAA
AGAAAAAAAAAAGTACAGACAGAAACAACTAAAGACAGAGAAACAAACAC
AAAAGAAGAAACGACAAGCACAAGGAGAGAGAAAAAAAAAGAGAACAAAG
GACAAAAAAGAGAAAAAAGAAAGACGAAAGAACAGAAAAAAGAAGAAGAA
CAAAGAAAAAGGAAAAAAGAGGCAAAAGAAACGAGAGGAGAAAACAACAA
ACCGAAAATAAAAGCGTAGAACAATATAGCGGACTGCAAAAGCAACGAAA
CAAAAAAAACGAAAGAACGAGAAGAAAAAACCACAAAACCCAAACACAAG
AGCGAACACGAGAAAAACACAAAAGAAACCAGAAGAGACACAAAGGGAGC
CAGAAAGAAGAGATGCAGAGAGAAAGGAAGACACAGAAAAACAGAGCACA
ATTGACAAAACACCCGAAAAAGAAGAACACAAAGAAACAGGAAAGGAAAA
GAAAAGAACAGAAACAGCAAAAAAGCCAAACAAAAACAGAAAAACAAAAC
CATACACAAAAGACAAGACACAC
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