GE213244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213244 vs. ExPASy Swiss-Prot
Match: UMP3_ARATH (Uncharacterized protein At5g10860, mitochondrial OS=Arabidopsis thaliana GN=At5g10860 PE=1 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.242e-92 Identity = 170/206 (82.52%), Postives = 189/206 (91.75%), Query Frame = -2 Query: 71 MQGAIQSFLSHGNIVKSAVLQRIRLVNPMLRP-VVSSRFESVSSARMEEHGFESTTISDILKAKGKGADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDHLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVRAVVSEHREELNRLNAFIQGGY 685 MQG I+SF+S GN+VK +VLQ +R++NP ++P V SR ES ARMEE GFESTTISD++K+KGK ADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ+++AGIITERD+LRKIIVQGRSSKSTKVGDIMTEENKLITV+P+TKVLRAMQLMTDNRIRHIPVI DKGMIGMVSIGDVVRAVV EHREEL RLNA+IQGGY Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGMIGMVSIGDVVRAVVHEHREELQRLNAYIQGGY 206
BLAST of GE213244 vs. ExPASy Swiss-Prot
Match: Y525_METKA (Uncharacterized protein MK0525 OS=Methanopyrus kandleri GN=MK0525 PE=4 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.735e-13 Identity = 45/140 (32.14%), Postives = 77/140 (55.00%), Query Frame = -2 Query: 77 DTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDHLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRA-------------VVSEHREELNRLNAFIQG 454 +T + M +H +G++V+V E+ GIITERD + K++ QG++ DIM++ +ITV D +V A++LM D IR +P++DD G +IG+V++ D+++ E EEL ++ I+G Sbjct: 21 ETAVEIAYKMREHGIGSVVIVN--EKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQP--VITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQVEPYLVATIEEEMKKFQEELEELEEVSEIIEG 156
BLAST of GE213244 vs. ExPASy Swiss-Prot
Match: YHCV_BACSU (CBS domain-containing protein yhcV OS=Bacillus subtilis GN=yhcV PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12 Identity = 38/106 (35.85%), Postives = 67/106 (63.21%), Query Frame = -2 Query: 140 DDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDHLRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 457 + T+ +A M QHNVGA+ VV+ G K G++T+RD + QGR + T V ++M+ E L++ +P+ + A QLM ++IR +P++D ++G+V++GD+ Sbjct: 18 NQTIQEAASLMKQHNVGAIPVVEQGVLK---GMLTDRDIALRTTAQGRDGQ-TPVSEVMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLVGIVALGDL 117
BLAST of GE213244 vs. ExPASy Swiss-Prot
Match: YBP3_ACIAM (Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus ambivalens PE=4 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12 Identity = 47/128 (36.72%), Postives = 75/128 (58.59%), Query Frame = -2 Query: 77 TVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDHLRKIIVQGRSSKS--TKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKG-MIGMVSIGDVVRAVVSEHREELNRLNAFIQG 451 T+ +A K M +HN+G+LVV+ Q V GIITERD IV+ S++ + V MT++ K +T DT+V A+ +M +N RH+P+I G + G+VSI D+ RA++ H + + ++G Sbjct: 21 TIAEAAKEMKEHNLGSLVVID--SQNRVVGIITERD-----IVKAASNRDIDSPVEKYMTKDVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEVKG 139
BLAST of GE213244 vs. ExPASy Swiss-Prot
Match: Y653_METJA (Uncharacterized protein MJ0653 OS=Methanocaldococcus jannaschii GN=MJ0653 PE=4 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12 Identity = 37/113 (32.74%), Postives = 69/113 (61.06%), Query Frame = -2 Query: 134 TTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDHLRKIIVQGRSSKSTKVGDIMTEE---NKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDVVR 463 T + ++YD MT++N+GA+V+V E GI+TERD +++++ SK+ K D++ EE K+IT+ + + A ++M + I+ +PV+ D ++G+V+ D+VR Sbjct: 21 TKNMSIYDIANIMTENNIGAVVIV---ENNKPIGIVTERDIVKRVV-----SKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGIVTQSDIVR 125
BLAST of GE213244 vs. ExPASy Swiss-Prot
Match: YLBB_BACSU (Uncharacterized protein ylbB OS=Bacillus subtilis GN=ylbB PE=4 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 42/111 (37.84%), Postives = 66/111 (59.46%), Query Frame = -2 Query: 140 WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSVAGIITERDH-LRKIIVQGRSSKSTKVGDIMTEENKLITVSPDTKVLRAMQLMTDNRIRHIPVIDDKGMIGMVSIGDV 469 +CT D VY+A M NVGA+ VV + +++ GI+T+RD LR I + + S K+ D MTE K ++V D V + LM +++R IPV +K + G+V++GD+ Sbjct: 14 YCTVLDNVYEAAVKMKDANVGAIPVVDE-DGETLVGIVTDRDLVLRGIAI--KKPNSQKITDAMTE--KPVSVEEDASVDEVLHLMASHQLRRIPVTKNKKLTGIVTLGDL 119 The following BLAST results are available for this feature:
BLAST of GE213244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GE213244 ID=GE213244; Name=GE213244; organism=Citrus sinensis; type=EST; length=734bpback to top |