EY727932

Overview
NameEY727932
Unique NameEY727932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length962
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY727932 vs. ExPASy Swiss-Prot
Match: POTF_ECOLI (Putrescine-binding periplasmic protein OS=Escherichia coli (strain K12) GN=potF PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 2.468e-23
Identity = 56/106 (52.83%), Postives = 77/106 (72.64%), Query Frame = -3 
Query:   19 EMLSCALHYLFVPTHTLKKEDFK-QAEALFLKLRPLIGYFHSSKYISDLANGNICVAVGYSGDVQQAKSRAAEAGGKVKVAYDIPKEGAGSFYDMVAIPKDAENVD 333
            E+ +  L+YL    ++ K +D+   A  L LKLRP I YFHSS+YI+DLANG+ICVA+G++GDV QA +RA EA   V V++ IPKEGA +F+D+ A+P DA+N D
Sbjct:  185 EVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKD 290
The following BLAST results are available for this feature:
BLAST of EY727932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
POTF_ECOLI2.468e-2352.83Putrescine-binding periplasmic protein OS=Escheric... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-107-D01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727932 ID=EY727932; Name=EY727932; organism=Citrus sinensis; type=EST; length=962bp
CCGGGGAATTTCCCGGGGGTCGACGTTTTCGGCATCTTTAGGGATGGCGA
CCATGTCATAGAAGCTGCCGGCGCCTTCTTTCGGAATGTCGTAGGCAACC
TTGACCTTGCCACCGGCTTCAGCCGCGCGGGACTTGGCCTGTTGCACGTC
ACCCGAATAACCCACGGCTACGCAGATGTTGCCGTTGGCCAGGTCGGAAA
TGTACTTGGACGAGTGGAAGTAGCCAATCAAAGGACGCAGTTTGAGGAAC
AAGGCCTCGGCTTGCTTGAAGTCTTCTTTCTTAAGGGTGTGGGTAGGCAC
GAACAGGTAATGCAATGCGCATGAAAGCATTTCGATTGAGAAAAACGAAG
AAAAACAAAAAGCAAACAATAGACTAGAAACAGATTGGGGACAAGAACGA
CGAAACGACACGCAACAAAAAGCACAAGGAAGCAACGGAAGACCAAAAGA
ACGAACAAAGAAAAAGAAGAAAAGAGAAGGAGAAAACAAAAAAGACAAGA
GACAAAAAAAAACAAACAAAAAAGAAAAAAAGATGAAGAAAAGAAAGAAG
GGAAAAAAAAGGAGAAAAAAGAACAAGAGAAGCACAGAATAGAACAAAGG
GACGCGAGCGGGAAGGAGAGGGGAAACAACAAAAAGCAAACATCGCGAAA
AGGAGAAGAACGAAGAGACAAAAAGGGCAAAGCAGGAAAAGAGAAAACGA
GCGAGCGGAACGGACCACAGAAGACGAAGGACACCCACACGGATAGACAT
GCGAAACGGGCACGGAGGCAGACACCACCGGCCCGACACAAAAAAGAGAC
AAGAGAAATAAAACGCGCAGAAAAAAGAAAAGCAAAAAAAGAAGGAACAG
AGGGAAGCACCAAGACAAGACACAAAAGACGAGACGGAGAGACAACAGAA
CAAGAGACACAAACCAACGACACAGAGAACAAAAGCGAAGGAAGAAAAAA
AAAGAAGGAAAC
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