EY727931

Overview
NameEY727931
Unique NameEY727931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY727931 vs. ExPASy Swiss-Prot
Match: Y1426_METJA (Uncharacterized protein MJ1426 OS=Methanocaldococcus jannaschii GN=MJ1426 PE=4 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.970e-11
Identity = 39/127 (30.71%), Postives = 74/127 (58.27%), Query Frame = 3 
Query:   12 EITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPE----VDSTWKTFNEVQKLLSKTNGKM---VGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 371
            +I+G PV++ D KLVG++S+ D++   +I       N + P     ++   KT  ++++ +      +   V D+MT   +V +    + DAA+L+++   +RLPVVD +G L+GI+TRG+++ A +
Sbjct:   44 KISGAPVLNKDGKLVGIISESDIVK--TIVTHNEDLNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLIEALI 168
The following BLAST results are available for this feature:
BLAST of EY727931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1426_METJA2.970e-1130.71Uncharacterized protein MJ1426 OS=Methanocaldococc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-107-C12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727931 ID=EY727931; Name=EY727931; organism=Citrus sinensis; type=EST; length=993bp
CCACGCGTCCGGAGATTACTGGTTTTCCTGTGATTGACGATGACTGGAAA
TTGGTTGGTCTTGTATCTGATTATGACTTGTTAGCATTGGACTCTATATC
AGGCAGCGGACGAGCTGATAACAGCATGTTTCCCGAAGTTGACAGCACTT
GGAAAACATTCAACGAGGTGCAGAAGTTGCTTAGTAAAACCAATGGGAAG
ATGGTGGGTGACTTAATGACGCCAGCCCCAGTCGTAGTTCGGGAAACGAC
TAATCTTGAGGATGCTGCTAGATTGTTACTTGAGACAAAATACCGCAGAC
TTCCAGTCGTGGATGCTGATGGTAAGCTGGTTGGAATTATCACAAGAGGA
AATGTAGTAAGGGCGGCTCTTCAAATAAAACATGCGACTGAAATGGGAGC
ACAATTAACGACAATTTGTTGAAAGAAATTTAGGCAGCCTTTGATTCTGC
AACCCATCCTTGGAACTATACAGATAGAGCGGTGGGGCGGCGTGCACCCC
CCCTACTGGACCCGTTTGGATTAACTGGTTAAAAATAAAAAGGTAACTTT
TTCCGGTATCATTTAATCCTCCACTTTCCCCGGGTAAAAACTTTATTTGG
GAAAAAATAAAAAATCCTTTTGGCTTAATGGAATTAAGTACCCAACCCAT
AGGAGTTATGAGATTGAGGTTTAATAGATTAAGAAAAAATATGAGGTGAT
GGAAAAGATGATAGAAAAGAAGCGCCCCAAAAGAACAACATCCGGGAGGA
GAACCCCAGGGAGCCGAAATAAAAAATATGACATTTTCTGTAAGGGGAGA
AGAAAAAGAAAGAAAAGAAAAAAAACACCAAAAAGACAAAGAGCAACACG
AGCAAAACAATGAAGAGAAAAGAGAGCCCAGTCATCACTAAGAAACTATT
CGAAACACGCGAAGCAAGTTTGGAGAGGGCCACCGAGGAGGGCTGCCACG
GAAAGAATACTGAAAATGGGCAGCCAACGAACAGCCCACACAC
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