EY727923

Overview
NameEY727923
Unique NameEY727923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length989
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PATT5_SOLTU (Patatin-T5 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.194e-24
Identity = 65/128 (50.78%), Postives = 78/128 (60.94%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGPKIF Q S S F             GPKYDGKYL  ++ E LG
Sbjct:   26 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNTDARLADYFDVIGGTSTGGLLTAMITTPNETNRPFAAAKDIVPFYFEHGPKIF-QSSGSIF-------------GPKYDGKYLMQVLQEKLG 139          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PT2K4_SOLTU (Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.367e-23
Identity = 63/128 (49.22%), Postives = 77/128 (60.16%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        LGP YDGKYL  ++ E LG
Sbjct:   14 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------LGPMYDGKYLLQVLQEKLG 127          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.397e-23
Identity = 62/128 (48.44%), Postives = 76/128 (59.38%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG
Sbjct:   26 GEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLG 139          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PAT17_SOLCD (Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 5.743e-23
Identity = 59/128 (46.09%), Postives = 77/128 (60.16%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            G+ +TVLS              L FLE +LQE+D  + AR+ADYFDV+ GTSTGGL+T M++ PN+   PF+AAK+I  FY EHGP+IF    +              +LGPKYDGKYL  ++ E LG
Sbjct:   26 GEMVTVLSIDGGGIRGIIPATILEFLEGQLQEMDNNADARLADYFDVIGGTSTGGLLTAMISTPNENNRPFAAAKEIVPFYFEHGPQIFNPSGQ--------------ILGPKYDGKYLMQVLQEKLG 139          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PATM3_SOLTU (Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.501e-23
Identity = 66/139 (47.48%), Postives = 80/139 (57.55%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FYLEHGP IF      N+  SI        +GP YDGKYL  ++ E LG
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYLEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLG 139          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PT2K2_SOLTU (Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.796e-23
Identity = 62/128 (48.44%), Postives = 75/128 (58.59%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP YDGKYL  ++ E LG
Sbjct:   26 GEMVTVLSIDGGGIKGIIPAVILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIIPFYFEHGPHIF------NYSGSI--------FGPMYDGKYLLQVLQEKLG 139          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PT2K1_SOLTU (Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.796e-23
Identity = 63/139 (45.32%), Postives = 78/139 (56.12%), Query Frame = 1
Query:   79 MATAGSA---EGKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            +AT GS     G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF              +    + GP YDGKYL  ++ E LG
Sbjct:    3 LATTGSTCATLGEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF--------------NSSGTIFGPMYDGKYLLQVLQEKLG 127          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PATM2_SOLTU (Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 9.796e-23
Identity = 62/127 (48.82%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  106 KKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            K +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        +GP YDGKYL  ++ E LG
Sbjct:   27 KMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLG 139          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PATB2_SOLTU (Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.279e-22
Identity = 66/139 (47.48%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI        LGP YDGKYL  ++ E LG
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------LGPMYDGKYLLQVLQEKLG 139          
BLAST of EY727923 vs. ExPASy Swiss-Prot
Match: PAT07_SOLTU (Patatin-07 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.279e-22
Identity = 65/139 (46.76%), Postives = 79/139 (56.83%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFSAAKDINNFYLEHGPKIFPQISRSNFLESIASSIDKLLLGPKYDGKYLRTLVNELLG 483
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF+AAKDI  FY EHGP IF      N+  SI         GP+YDGKYL  ++ E LG
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLMQVLQEKLG 139          
The following BLAST results are available for this feature:
BLAST of EY727923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PATT5_SOLTU5.194e-2450.78Patatin-T5 OS=Solanum tuberosum PE=1 SV=1[more]
PT2K4_SOLTU3.367e-2349.22Patatin-2-Kuras 4 OS=Solanum tuberosum GN=pat2-k4 ... [more]
PAT0_SOLTU4.397e-2348.44Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PAT17_SOLCD5.743e-2346.09Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1[more]
PATM3_SOLTU7.501e-2347.48Patatin group M-3 OS=Solanum tuberosum PE=2 SV=1[more]
PT2K2_SOLTU9.796e-2348.44Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 ... [more]
PT2K1_SOLTU9.796e-2345.32Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 ... [more]
PATM2_SOLTU9.796e-2348.82Patatin group M-2 OS=Solanum tuberosum PE=2 SV=1[more]
PATB2_SOLTU1.279e-2247.48Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1[more]
PAT07_SOLTU1.279e-2246.76Patatin-07 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-107-C04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727923 ID=EY727923; Name=EY727923; organism=Citrus sinensis; type=EST; length=989bp
ATAATTTCGAATTTAAAAGCTGCCCTATCTGATCGTACTTCTATTTAACT
TCAAGAAGCTCTTTCAATTTGAAATAAAATGGCCACTGCCGGTTCTGCAG
AAGGAAAGAAAATAACAGTTCTGAGCATCGATGGAGGTGGCATTAGGGGC
ATTATTCCGGGCACTATTTTAGCCTTTCTTGAATCCAAGCTCCAGGAATT
GGATGGACCAAGTGCAAGAATTGCAGATTATTTTGATGTAGTAGCAGGAA
CAAGCACCGGCGGATTGGTAACCACCATGCTTACGGCACCCAACAAGGAA
GGCGGACCTTTCAGTGCTGCAAAGGATATCAATAATTTTTATCTTGAGCA
CGGTCCTAAAATTTTCCCTCAAATTAGCCGCAGCAACTTCTTGGAATCGA
TAGCAAGCTCTATCGATAAACTGCTGCTTGGACCAAAGTATGATGGGAAG
TACCTGCGGACACTAGTAAACGAGCTACTAGGAAGACGTTACTGTGAAAA
AGACTCTTACCCACGTGGGTTTATCCAACTTTTGACATCAAGCTTTCTTC
AACCATTCCTCCTTCTCAACCACCGATGGAAAAAAAACCTTTTTGAAAAA
GGCTCCGGCTGGGCTGAAATATGGCAAAACCACTTCCGGCAGCGCCCCTT
TACTCCCCCCCCCCTACTTTGAAAAACAAAGGGCAGTGGCAGGGGGCAAA
ACCCCGAACTTTTTGATTTTGGTTGACGGGGGGAAATTGCTGCCAAATAA
ACCCCCCCAATTGGGGAAAAAGCCCCCCATATAGAAGGAAAGGGGGAAAC
CAAAACCCCCCATTTCCGGGGGAAAAAAAAACCCCACGGGGAAGGGGGGA
AAAAATTTTGGGGGGGCCAACCCACCAAGCGGCACGGGGGCACACCCCCC
AAAAAAAAAAGAAATTGAGAAATAAAGAAAAGTGAGACCCCCCACAACCC
CCCCCCCCCCCACAGAGGGGGGGGGGCGATATTTTTTTT
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