EY754109

Overview
NameEY754109
Unique NameEY754109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 6.196e-74
Identity = 154/246 (62.60%), Postives = 185/246 (75.20%), Query Frame = 1
Query:    4 EMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNY---GLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGS--TSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFK---IPGNGLVGVDKIGCNINNNNDGKRLREM-ELLSLECSKKQRMIGA 714
            ++ FL +HSK+EIVDMLRKHTY DELEQ+ +      +DANGKR       +G +T   +D+VLK R+ LFEKAVTPSDVGKLNRLVIPKQHAEKHFPL S S   +KG+L+NFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F RSTG +RQLYIDWK R+GP ENPV+ V  +RLFGV+IF    +  N +V V    C       GKR R++ ++ +L CSKKQ +I A
Sbjct:  126 DLAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKR-------NGSSTT-QNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVV--VRLFGVDIFNVTTVKPNDVVAV----CG------GKRSRDVDDMFALRCSKKQAIINA 351          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.094e-70
Identity = 148/246 (60.16%), Postives = 176/246 (71.54%), Query Frame = 1
Query:    4 EMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATA-FGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS--------KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFKIPGN--GLVGVDKIGCNINNNNDGKRLREMELLSLECSKKQRMI 708
            E  FL +HSK+EIVDMLRKHTY DE EQS+R + ++ +GKR        G+ TA +G+D VL+AR+ LFEK VTPSDVGKLNRLVIPKQHAEKHFPL + +T+        KG+L+N ED TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V F RSTG DRQLYI WK R+ PV+       ++RLFGVNIF +       V V+ +G         KR RE +L SL CSKKQ +I
Sbjct:  135 ESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKF-VNGDGKR-------SGLETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT------VVRLFGVNIFNVSNEKPNDVAVECVG--------KKRSREDDLFSLGCSKKQAII 358          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 9.259e-70
Identity = 147/242 (60.74%), Postives = 175/242 (72.31%), Query Frame = 1
Query:    4 EMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHG--EGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS-KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIF-KIPGNGLVGVDKIGCNINNNNDGKRLREMELLSLECSKKQRMIGAS 717
            E+ FL+SHSKSEIVDMLRKHTYN+ELEQSKR    + N  R +       DGV+T        ++ + LFEKAVTPSDVGKLNRLVIPK HAEKHFPL S + S KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+VSF RS G D+QLYI WK+R+G   + ++  +++RLFGVNI  +   N +VG              KR+ + E+LSL CSKKQR+  AS
Sbjct:  124 EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTG-----FRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSG---SDLDAGRVLRLFGVNISPESSRNDVVG-------------NKRVNDTEMLSLVCSKKQRIFHAS 344          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.366e-57
Identity = 132/239 (55.23%), Postives = 158/239 (66.11%), Query Frame = 1
Query:    4 EMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVA-TAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFKIPGNGLVGVDKIGCNINNNNDGKRLREMELLSLECSKKQRMI 708
            E+ FL++HSKSEIVDMLRKHTY +EL+Q KRN   D NGK          V  T F      K  + LFEK VTPSDVGKLNRLVIPK  AEKHFPL  G+ +   KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++SF RS   D++ +I WK+++G     +E  ++MRLFGV+I     N +V V             K   E+ + SL C KKQR++
Sbjct:  123 EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNR--DGNGKETTAFALASMVVMTGF------KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSG---LDLETGRVMRLFGVDISL---NAVVVV-------------KETTEVLMSSLRC-KKQRVL 333          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 1.174e-56
Identity = 121/210 (57.62%), Postives = 142/210 (67.62%), Query Frame = 1
Query:    4 EMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRV-LKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWK-------ARTGPVENPV-EPVQMMRLFGVNIFKIP 588
            E+ FL++ SK+E+VDMLRKHTY DEL QSKR +               +G  ++  S      ARD LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ   +G  SKG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD+V F+R   S G D +L+ID K       A   P + P   PV+ +RLFGV++   P
Sbjct:  148 ELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLSNGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.707e-52
Identity = 115/225 (51.11%), Postives = 138/225 (61.33%), Query Frame = 1
Query:    1 IEMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ------------------SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGP---------------VENPVEPVQMMRLFGVNI 576
            +E+ FL+S SK+E+VDMLRKHTY +EL Q+KR +   A      KH      +++        AR+ LF+K VTPSDVGKLNRLVIPKQHAEKHFPLQ                   G   KG+LLNFED  GKVW+FRYSYWNSSQSYVLTKGWSRFVKEK L AGD V F+R+ G + QL+ID K R  P                  P   V+ +RLFGV++
Sbjct:  134 VELRFLASRSKAEVVDMLRKHTYLEELTQNKRAFA--AISPPPPKHPASSPTSSS-------AAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNAQLFIDCKVRAKPTTAAAAAAFLSAVAAAAAPPPAVKAIRLFGVDL 349          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: Y1410_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica GN=Os01g0141000 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.321e-51
Identity = 116/213 (54.46%), Postives = 138/213 (64.79%), Query Frame = 1
Query:    4 EMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQ---------SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRST-GGDRQLYIDWKARTG------------PVENPVEPVQMMRLFGVNI 576
            E+ FL++HSK+EIVDMLRKHTY DEL Q              ++ G G G   A        AR+ LFEKAVTPSDVGKLNRLV+PKQHAEKHFPL+         + +T KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFV+EK L+AGD + F RS  G D+ L+ID K                P  +  EP +++RLFGV+I
Sbjct:  131 ELAFLAAHSKAEIVDMLRKHTYADELRQG-------------LRRGRGMG---ARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDKLLFIDCKKNNAAAATTTCAGDERPTTSGAEP-RVVRLFGVDI 326          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: Y1407_ORYSJ (Putative AP2/ERF and B3 domain-containing protein Os01g0140700 OS=Oryza sativa subsp. japonica GN=Os01g0140700 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.438e-46
Identity = 107/201 (53.23%), Postives = 129/201 (64.18%), Query Frame = 1
Query:    4 EMLFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGEGDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPL-----QSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRST---GGDRQLYIDWK--ARTGPVENPVEPVQMMRLFGVNI 576
            E+ FL++HSK+E+VDMLRKHTY+DEL+Q  R       G R                     AR+ LFEKAVTPSDVGKLNRLV+PKQ AE+HFP       S +  KG+LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFV+EK L+ GD V+F RS    G ++ L ID K   R        +   +++LFGV+I
Sbjct:  131 ELAFLAAHSKAEVVDMLRKHTYDDELQQGLRR------GSRA--------------QPTPRWAREPLFEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRSAAAWGTEKHLLIDCKKMERNNLATVDDDARVVVKLFGVDI 311          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.646e-42
Identity = 83/122 (68.03%), Postives = 97/122 (79.51%), Query Frame = 1
Query:  178 RVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWKARTGPVENP 534
            R +  R+ +F+K VTPSDVGKLNRLVIPKQHAE+ FPL S S  KGLLLNFED+TGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDIVSF R    +G D +L+IDW+ R    ++P
Sbjct:   26 REVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVPDHP 147          
BLAST of EY754109 vs. ExPASy Swiss-Prot
Match: Y2835_ORYSJ (B3 domain-containing protein Os02g0683500 OS=Oryza sativa subsp. japonica GN=Os02g0683500 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.628e-40
Identity = 80/126 (63.49%), Postives = 94/126 (74.60%), Query Frame = 1
Query:  145 GDGVATAFGSDRVLKARDQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGD---RQLYIDWKAR 513
            G G     G +  +  ++ +F+K VTPSDVGKLNRLVIPKQ+AEK+FPL + +  KGLLLNFED  GK WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R  G +    +L+IDWK R
Sbjct:   76 GSGGGGGGGGEAEVVEKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFPLDAAANEKGLLLNFEDRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDEAARHRLFIDWKRR 201          
The following BLAST results are available for this feature:
BLAST of EY754109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
RAV2_ARATH6.196e-7462.60AP2/ERF and B3 domain-containing transcription rep... [more]
RAVL1_ARATH1.094e-7060.16AP2/ERF and B3 domain-containing transcription rep... [more]
RAV1_ARATH9.259e-7060.74AP2/ERF and B3 domain-containing transcription fac... [more]
RAVL4_ARATH2.366e-5755.23AP2/ERF and B3 domain-containing transcription fac... [more]
Y1934_ORYSJ1.174e-5657.62AP2/ERF and B3 domain-containing protein Os01g0693... [more]
Y5498_ORYSJ8.707e-5251.11AP2/ERF and B3 domain-containing protein Os05g0549... [more]
Y1410_ORYSJ4.321e-5154.46AP2/ERF and B3 domain-containing protein Os01g0141... [more]
Y1407_ORYSJ1.438e-4653.23Putative AP2/ERF and B3 domain-containing protein ... [more]
NGA1_ARATH1.646e-4268.03B3 domain-containing transcription factor NGA1 OS=... [more]
Y2835_ORYSJ2.628e-4063.49B3 domain-containing protein Os02g0683500 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-G10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754109 ID=EY754109; Name=EY754109; organism=Citrus sinensis; type=EST; length=899bp
ATCGAAATGTTGTTCTTGAGCTCCCACTCCAAGTCCGAGATCGTCGATAT
GCTGAGGAAGCACACTTACAACGACGAGCTCGAGCAGAGCAAAAGAAACT
ACGGCCTCGATGCCAACGGCAAGCGTGTAATCAAACACGGGGAAGGTGAT
GGTGTTGCCACTGCCTTCGGTTCAGACCGGGTCCTTAAAGCGCGTGACCA
GCTTTTTGAAAAGGCCGTTACCCCAAGTGACGTGGGGAAGCTGAACCGGC
TCGTGATACCCAAGCAGCACGCGGAGAAGCACTTCCCTTTACAGAGCGGA
AGCACTTCCAAGGGACTGCTCTTGAACTTTGAGGATGTCACCGGCAAAGT
TTGGAGGTTTAGGTACTCCTACTGGAACAGCAGTCAAAGCTACGTTTTGA
CCAAAGGGTGGAGCCGGTTCGTCAAGGAGAAGAATTTGAAAGCCGGTGAC
ATTGTTAGCTTTCACAGATCGACCGGTGGGGATAGGCAGCTTTACATTGA
TTGGAAAGCCAGAACAGGACCGGTCGAGAACCCGGTCGAGCCGGTCCAGA
TGATGAGGCTATTTGGGGTCAACATTTTCAAAATTCCTGGGAATGGTCTT
GTTGGTGTCGATAAGATTGGGTGCAACATTAATAATAATAACGACGGCAA
AAGGCTTAGAGAAATGGAGCTCTTGTCTCTAGAGTGCAGCAAAAAACAAA
GAATGATTGGAGCTTCGTAAACATCTTTTTCTTTTTTCTTTCTTTTTGGA
ATCTTATTTCTGGGTGAATTTTTCTTTTCTTTTTNCCTTTGGNAGTTTTG
GAATTTTGAGGAGNTTTAGGGGAAAGAANAGACTGGGAAGGGTGTGCCAN
TANTTGCAAGTGCAAAGAAAGGAAAAGTTGATTGTAAATACAGTGACAA
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