EY727919

Overview
NameEY727919
Unique NameEY727919
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1015
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY727919 vs. ExPASy Swiss-Prot
Match: DRP2B_ARATH (Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.698e-49
Identity = 93/128 (72.66%), Postives = 101/128 (78.91%), Query Frame = 1 
Query:   16 DGTRTVGVISKIDXXXXXXXXXXXXXXXXXXXGPPKTADISWVALIGQSVSIATAQSG-SESSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIRKRMKVRVPNVLSGLQGKSQIVQDELVR 396
            + TRTVG+ISKID                   GPPKT DI WVALIGQSVSIA+AQSG SE+SLETAWRAESESLKSILTGAPQSKLGRIALVD LA QIR RMK+R+PN+L+GLQGKSQIVQDEL R
Sbjct:  195 ESTRTVGIISKIDQAAENPKSLAAVQALLSNQGPPKTTDIPWVALIGQSVSIASAQSGGSENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPNILTGLQGKSQIVQDELAR 322

HSP 2 Score: 45.8246 bits (107), Expect = 1.698e-49
Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 2 
Query:  398 LGEQMVQNAEGTRSLALELCPEFEE*VFLQHNYNWVKGFWVKKLLPIFEGGISRKGIKQL 577
            LGEQ+V +AEGTR++ALELC EFE+  FL H        W  K++  FEG    + IK+L
Sbjct:  323 LGEQLVSSAEGTRAIALELCREFED-KFLLHLAGGEGSGW--KVVASFEGNFPNR-IKKL 378
[Close]
BLAST of EY727919 vs. ExPASy Swiss-Prot
Match: DRP2A_ARATH (Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.387e-49
Identity = 91/128 (71.09%), Postives = 100/128 (78.12%), Query Frame = 1 
Query:   16 DGTRTVGVISKIDXXXXXXXXXXXXXXXXXXXGPPKTADISWVALIGQSVSIATAQSGS-ESSLETAWRAESESLKSILTGAPQSKLGRIALVDALAQQIRKRMKVRVPNVLSGLQGKSQIVQDELVR 396
            + TRT+G+I KID                   GPPKT DI WVA+IGQSVSIA+AQSGS E+SLETAWRAESESLKSILTGAPQSKLGRIALVD LA QIR RMK+R+P+VLSGLQGKSQIVQDEL R
Sbjct:  195 ESTRTIGIIGKIDQAAENSKALAAVQALLSNQGPPKTTDIPWVAVIGQSVSIASAQSGSGENSLETAWRAESESLKSILTGAPQSKLGRIALVDTLASQIRSRMKLRLPSVLSGLQGKSQIVQDELAR 322

HSP 2 Score: 47.3654 bits (111), Expect = 6.387e-49
Identity = 30/60 (50.00%), Postives = 38/60 (63.33%), Query Frame = 2 
Query:  398 LGEQMVQNAEGTRSLALELCPEFEE*VFLQHNYNWVKGFWVKKLLPIFEGGISRKGIKQL 577
            LGEQ+V +AEGTR++ALELC EFE+  FL H        W  K++  FEG    + IKQL
Sbjct:  323 LGEQLVNSAEGTRAIALELCREFED-KFLLHLAGGEGSGW--KVVASFEGNFPNR-IKQL 378
The following BLAST results are available for this feature:
BLAST of EY727919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DRP2B_ARATH1.698e-4972.66Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 S... [more]
DRP2A_ARATH6.387e-4971.09Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-107-B11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727919 ID=EY727919; Name=EY727919; organism=Citrus sinensis; type=EST; length=1015bp
CCCACGCGTCCGGGAGATGGAACCAGAACTGTTGGTGTAATAAGTAAAAT
AGATCAAGCTTCTGCAGACCAAAAAGCTCTTGCTGCTGTGCAGGCTCTCC
TGTTAAATCAAGGTCCACCAAAAACAGCTGACATTTCGTGGGTTGCATTA
ATTGGTCAATCAGTATCAATAGCTACTGCTCAGTCTGGATCTGAGAGCTC
CTTAGAAACTGCTTGGAGGGCAGAAAGTGAGTCTCTTAAGTCTATATTGA
CTGGTGCTCCTCAGAGTAAGTTAGGCAGAATAGCATTGGTGGATGCTTTG
GCTCAACAGATCCGCAAGCGTATGAAAGTCCGGGTGCCAAACGTCCTCTC
TGGATTACAAGGAAAGTCTCAAATAGTTCAGGATGAGTTAGTGCGGCCTT
GGTGAGCAAATGGTCCAAAATGCTGAGGGCACAAGATCTTTGGCTTTGGA
GCTGTGTCCTGAATTTGAGGAATAAGTTTTCCTGCAACACAATTACAACT
GGGTGAAGGGGTTCTGGGTGAAAAAATTGTTGCCCATTTTTGAGGGGGGA
ATTTCCCGAAAAGGGATCAAACAGCTTTCCTTTGGAAAAAACATTTTTAA
AATTAAAAAAATGGCCAAAAAGAAATTTTTGGTAAAAAAACGAAAGGGGA
TACCAACCCCAAAAACAAAAAAACCCCCCCTAAAAAAAGAGTTTGAAAAA
TTATTTTAATCAAAGAGGGGGACCCTGGAAACCTTGACAAAAAAAAAACA
CCCATTCTAGACCTATTTGGGTTTTGAAAAAAAAGGGACACAACCCGAGG
AGATATGCAGGATGAGAAAATAAAAACTTTATTGGAGACATAATCGGCAC
ACAAGAAGGCGTGTACCACCGCCCAGGGGACCACTGGGCGGAGAGAAAAA
AAATCACACTCCCCCCCCCACCCTTTTTTTTTAAGTGGAGAAAAGGAAGA
GAGAGAGGGGTTTGTCGGGGAGAAACGCAACACATATGTGAGCTGGCGGG
GACAATACGGCGAGG
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