EY727917

Overview
NameEY727917
Unique NameEY727917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 5.252e-22
Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEIENRVMVDG--NLITSRGPGTSMEFALAIVEKFFGRNKALELAKILL 408
            R VKL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +K+   S R   AICA+PA VL PH +      T FP + +K+  +  ++ RV+ D    L+TS+GPGT+++F L I++   GR KA E+A  L+
Sbjct:   49 RGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLV 186          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.528e-21
Identity = 59/138 (42.75%), Postives = 84/138 (60.87%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLSYDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEIENRVMVDG--NLITSRGPGTSMEFALAIVEKFFGRNKALELAKILL 408
            R VKL+AD  + E A   YD+IVLPGG+ GA+ F  S  LV  +K+   S R   AICA+ A VL PH +      T FPA+ +K+  +  ++ RV+ D    L+TS+GPGT+++F L I++   GR KA E+A  L+
Sbjct:   49 RGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKIPAEQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVASQLV 186          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.601e-18
Identity = 57/140 (40.71%), Postives = 78/140 (55.71%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILL 408
            REV +  D  +++A K   YD+++LPGGL GAQ  ++S  +  +LK Q+       AICA P  +L  HG+  G   T  P   +K+         E RV  DGN+ITSRGPGTS EFAL IVE+  G   A ++   L+
Sbjct:   48 REVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPTALLA-HGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQVKAPLI 186          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 2.283e-17
Identity = 56/140 (40.00%), Postives = 81/140 (57.86%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKALELAKILL 408
            R+V +  D  +++A K   YD+IVLPGG  GAQ  ++S  + ++LK Q+       AICA P  +L  HG+  G K    P   +K+ + +     E+RV  DGN++TSRGPGTS EF LAIVE   G+  A ++   L+
Sbjct:   48 RDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPTALLA-HGIGFGSKVITHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVAEQVKAPLI 186          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.087e-17
Identity = 56/132 (42.42%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 384
            R+V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G+  A
Sbjct:   48 RDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPTALLA-HEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAA 178          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 393
            R+V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:   48 RDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17
Identity = 55/135 (40.74%), Postives = 78/135 (57.78%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKLSDQSEI---ENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKALEL 393
            R+V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+ +       ENRV  DG ++TSRGPGTS EFALAIVE   G+  A ++
Sbjct:   48 RDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQV 181          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.677e-17
Identity = 56/132 (42.42%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 384
            R+V +  D  +++A K   YD++VLPGG  GAQ  ++S  +  +LK+Q++      AICA P  +L  H +  G K T  P   +K+   S  S  ENRV  DG ++TSRGPGTS EFAL IVE   G+  A
Sbjct:   48 RDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPTALLA-HEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVA 178          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.297e-16
Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 384
            R+V +  D  ++EA     YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T+ P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G++ A
Sbjct:   48 RDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPTALLA-HEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMA 178          
BLAST of EY727917 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.306e-16
Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 REVKLVADMLIDEAAKLS-YDLIVLPGGLGGAQAFAKSEKLVNMLKKQKESNRPYGAICASPALVLEPHGLLKGKKATAFPAMCNKL---SDQSEIENRVMVDGNLITSRGPGTSMEFALAIVEKFFGRNKA 384
            R+V +  D  +++A     YD++VLPGG  GAQ  ++S  +  +LK+Q+       AICA P  +L  H +  G K T  P   +K+   S  S  E+RV  DG ++TSRGPGTS EFALAIVE   G++ A
Sbjct:   48 RDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPTALLA-HEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMA 178          
The following BLAST results are available for this feature:
BLAST of EY727917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
THIJ_ECOLI5.252e-2242.75Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY1.528e-2142.75Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]
PARK7_DANRE4.601e-1840.71Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_CHICK2.283e-1740.00Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_MESAU5.087e-1742.42Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_HUMAN8.677e-1740.74Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_CERAE8.677e-1740.74Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_BOVIN8.677e-1742.42Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_RAT3.297e-1642.42Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
PARK7_MOUSE4.306e-1641.67Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-107-B09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727917 ID=EY727917; Name=EY727917; organism=Citrus sinensis; type=EST; length=1046bp
CGTGAAGTTAAATTAGTGGCAGATATGCTTATTGATGAGGCAGCTAAACT
TTCGTATGATTTGATTGTCTTGCCAGGTGGACTTGGTGGTGCTCAAGCAT
TTGCGAAGTCAGAAAAATTGGTAAATATGCTAAAGAAGCAAAAGGAATCA
AATAGACCTTATGGTGCTATATGTGCATCCCCAGCACTAGTGTTGGAGCC
CCATGGCTTACTCAAGGGTAAAAAAGCTACGGCTTTTCCTGCCATGTGCA
ACAAGCTATCAGATCAAAGTGAAATCGAAAACAGAGTTATGGTTGATGGC
AACCTTATCACCAGCAGAGGGCCAGGAACTTCCATGGAGTTTGCACTGGC
AATTGTGGAGAAGTTTTTTGGCCGCAACAAAGCTCTTGAGCTTGCAAAGA
TATTGCTTTTTACCCGCACCTAAAATTTGTACGAGGACCTGACTACTATT
AAACTATAGTATTTTATTCCTGTATTACTACTGCTTGTAAAAAGGCGAAA
TGGAAAACTTTGAATTCTTGTTTGATTATGGAATTCACTGTGGGGGTTTA
AACAAGCCTTTTCAAATTTTTTGGGAATTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAGGGCGGCCCGCTTCCAAAAAGGGATTCAAAGCTTAAGGTAAG
CCGGGCATTGCGAAACGTCATAACCTCCTTCTAAAAGGGGTCACACCTAA
ATTTCCAATTTCCCTGGGCCGGCCCTTTTTTTACAACACTCATGGACAGG
GGGAAAAACCCCTGGGGGGTTTTCCCAAAATTTTATACTTTCCTTTTGTC
GCAACAATTCCCCCCCTTTTTCACCCCAGGCGGGGGGGAAAAGAAGTAGA
AAAAAAAAGCCCCACACCCCCGGATATTCCCCCCCTATCCCCCCCTCAAG
TGTATGTGCCACCAACTCACAGGAAATGGGGAGAAATGAGGGGGGGAAAA
ACACCACCCCTCTTTGATAGCACGCGGGCTCACCTAATTATAAAGACCCG
CGTGGCGACGCGAAGGTGGGTGTGATGGGGGGTGGGGGTATAAATA
back to top