EY754107

Overview
NameEY754107
Unique NameEY754107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_POPJC (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii GN=ndhM PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.957e-77
Identity = 147/201 (73.13%), Postives = 161/201 (80.10%), Query Frame = 1
Query:   43 MATTSINMASAKFSMLGWIGGKRELKKKRVISISXXXXXXXXXXXXXXXXXXXXXAQVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNN 645
            MA +S  MA AKFSMLGW+GG+RELK +RVIS+S                      +VKQ   P RPVEPQ NV+SKNM REYGGQWLS  TRHVRIYAAYIDPET EFDQTQ DKLTLILDPT EFVWTDE+C KV++YFQELVDHYEGA LTEYTLRLIGSD+EHYIRKLLYDGEIKYNM+ARVLNFSMGKPRI+FNN+
Sbjct:    1 MAASSSYMACAKFSMLGWLGGRRELKMRRVISVSPQEQAEVQESQEVNAQEEE---KVKQPVQP-RPVEPQVNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPETCEFDQTQTDKLTLILDPTDEFVWTDETCYKVYSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFNND 197          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_VITVI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera GN=ndhM PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.826e-76
Identity = 145/201 (72.14%), Postives = 156/201 (77.61%), Query Frame = 1
Query:   43 MATTSINMASAKFSMLGWIGGKRELKKKRVISISXXXXXXXXXXXXXXXXXXXXXAQVKQQQTPL-RPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNN 642
            MA TS   A  KFSMLGWIGGKREL+K+R   IS                        +Q +  L RPVEPQ NV+SKNMSREYGGQWLS  TRHVRIYAAYIDP T EFDQTQMDKLTLILDPT EFVWT E+CNKV+AYFQELVDHYEGA LTEYTLRLIGSD+EHYIRKLLYDGEIKYNM+ARVLNFSMGKPRI+FN+
Sbjct:    1 MAATSSYTACTKFSMLGWIGGKRELRKRRAFFISAQQQAEVEESQQVNAQEEEQEKMKQQGKQKLPRPVEPQVNVKSKNMSREYGGQWLSSVTRHVRIYAAYIDPVTCEFDQTQMDKLTLILDPTNEFVWTSETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNARVLNFSMGKPRILFND 201          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_ARATH (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana GN=ndhM PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.455e-64
Identity = 116/147 (78.91%), Postives = 133/147 (90.48%), Query Frame = 1
Query:  211 QVKQQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNEL 651
            ++K+Q TPLRPVE Q NV+SK M  ++GGQWLS  TRHVRIYAAYIDPET EFDQ+QMDKLTLILDPT+EFVW DESCNKV++YFQELVDHYEGA LTEYTLRLIGSD+EHYIRK+L+DGEI+YNMDARVLNFSMGKPR+ FN + +
Sbjct:   60 KMKKQPTPLRPVEKQLNVKSKGMG-DFGGQWLSSVTRHVRIYAAYIDPETCEFDQSQMDKLTLILDPTEEFVWDDESCNKVYSYFQELVDHYEGAPLTEYTLRLIGSDVEHYIRKMLFDGEIQYNMDARVLNFSMGKPRVQFNTSNI 205          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSJ (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica GN=ndhM PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.720e-61
Identity = 110/145 (75.86%), Postives = 127/145 (87.59%), Query Frame = 1
Query:  220 QQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNELP 654
            ++Q P +P+  Q    SKNMSREYGGQWLSC TRH+RIYAAYI+PET  FDQTQMDKLTL+LDPT EFVWTDE+C KV+  FQ+LVDHYEGA L+EYTLRLIGSDLEH+IRKLLYDGEIKYNM +RVLNFSMGKPRI FN++++P
Sbjct:   73 RRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_ORYSI (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica GN=ndhM PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.720e-61
Identity = 110/145 (75.86%), Postives = 127/145 (87.59%), Query Frame = 1
Query:  220 QQQTPLRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRIMFNNNELP 654
            ++Q P +P+  Q    SKNMSREYGGQWLSC TRH+RIYAAYI+PET  FDQTQMDKLTL+LDPT EFVWTDE+C KV+  FQ+LVDHYEGA L+EYTLRLIGSDLEH+IRKLLYDGEIKYNM +RVLNFSMGKPRI FN++++P
Sbjct:   73 RRQGPAQPLPVQPLAESKNMSREYGGQWLSCTTRHIRIYAAYINPETNAFDQTQMDKLTLLLDPTDEFVWTDETCQKVYDEFQDLVDHYEGAELSEYTLRLIGSDLEHFIRKLLYDGEIKYNMMSRVLNFSMGKPRIKFNSSQIP 217          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_PHYPA (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Physcomitrella patens GN=ndhM PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.975e-45
Identity = 88/132 (66.67%), Postives = 104/132 (78.79%), Query Frame = 1
Query:  235 LRPVEPQTNVRSKNMSREYGGQWLSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 630
            +R  E +   ++K +SRE GGQWLSC TRHVRIYA Y+DPET   DQ+Q+DKLTL+LDP  EF W +E   KV+  ++ELV+ Y GA LTEYTLRLIGSDLEHYIRKLL  GE+KYN+D RVLNFSMGKPRI
Sbjct:   61 VRAEEVKEVTQAKGLSRESGGQWLSCTTRHVRIYAGYVDPETQVMDQSQLDKLTLMLDPDNEFEWPEEMVEKVYDKYRELVETYAGADLTEYTLRLIGSDLEHYIRKLLLAGELKYNLDCRVLNFSMGKPRI 192          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_GLOVI (NAD(P)H-quinone oxidoreductase subunit M OS=Gloeobacter violaceus GN=ndhM PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.281e-24
Identity = 58/109 (53.21%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  304 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 630
            L   TRHV I+AA I  + +    T   KLTL +DP  EF+W D +  KV++ F  LV  Y G  LTEY LR IGSDLE++IR LL  GEI YN+D+RVLNFSMG+P++
Sbjct:    2 LKSTTRHVHIFAADIRNDNFIASDT---KLTLDVDPDNEFIWNDPALQKVYSEFDRLVAAYTGLALTEYNLRRIGSDLENFIRGLLQQGEIAYNLDSRVLNFSMGRPQV 107          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_CYAP7 (NAD(P)H-quinone oxidoreductase subunit M OS=Cyanothece sp. (strain PCC 7424) GN=ndhM PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.627e-23
Identity = 59/110 (53.64%), Postives = 73/110 (66.36%), Query Frame = 1
Query:  304 LSCATRHVRIYAAYI-DPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 630
            L   TRH+RIY A I + E  E D      LTL +DP  EF+W ++S  KV+  F +LV+ Y G  LTEY LR IGSDLE +IR LL  GEI YN+D+RVLN+SMG PR+
Sbjct:    3 LKSTTRHIRIYTAEIQNNELVESDNV----LTLDVDPDNEFLWDEDSLQKVYRKFDDLVESYSGEDLTEYNLRRIGSDLELFIRSLLQQGEISYNLDSRVLNYSMGLPRV 108          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_SYNJB (NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp. GN=ndhM PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.624e-23
Identity = 56/109 (51.38%), Postives = 69/109 (63.30%), Query Frame = 1
Query:  304 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 630
            L C TRHV I+A  +  +     +   D  TL +DP  E VWTD +  KV+A F+ELV+ Y G  LTEY +R IGSDLEH+IR LL  GEI YN+  R  NFSMG P+I
Sbjct:    2 LKCTTRHVHIFAGEVTADNNFVPRD--DLFTLDVDPDNELVWTDAALQKVYARFEELVEEYRGRDLTEYNIRRIGSDLEHFIRSLLKQGEIAYNLQGRAPNFSMGFPQI 108          
BLAST of EY754107 vs. ExPASy Swiss-Prot
Match: NDHM_SYNJA (NAD(P)H-quinone oxidoreductase subunit M OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndhM PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.624e-23
Identity = 56/109 (51.38%), Postives = 69/109 (63.30%), Query Frame = 1
Query:  304 LSCATRHVRIYAAYIDPETWEFDQTQMDKLTLILDPTKEFVWTDESCNKVFAYFQELVDHYEGALLTEYTLRLIGSDLEHYIRKLLYDGEIKYNMDARVLNFSMGKPRI 630
            L C TRHV I+A  +  +     +   D LTL +DP  E VW D +  KV+A F+ELV+ Y G  LTEY LR IGSDLEH+IR LL  GEI YN+  R  N+SMG P+I
Sbjct:    2 LKCTTRHVHIFAGEVTADNHFVPRD--DLLTLDVDPDNELVWNDAALQKVYARFEELVEEYRGRDLTEYNLRRIGSDLEHFIRSLLKQGEIAYNLQGRTPNYSMGFPQI 108          
The following BLAST results are available for this feature:
BLAST of EY754107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
NDHM_POPJC1.957e-7773.13NAD(P)H-quinone oxidoreductase subunit M, chloropl... [more]
NDHM_VITVI2.826e-7672.14NAD(P)H-quinone oxidoreductase subunit M, chloropl... [more]
NDHM_ARATH1.455e-6478.91NAD(P)H-quinone oxidoreductase subunit M, chloropl... [more]
NDHM_ORYSJ5.720e-6175.86NAD(P)H-quinone oxidoreductase subunit M, chloropl... [more]
NDHM_ORYSI5.720e-6175.86NAD(P)H-quinone oxidoreductase subunit M, chloropl... [more]
NDHM_PHYPA1.975e-4566.67NAD(P)H-quinone oxidoreductase subunit M, chloropl... [more]
NDHM_GLOVI4.281e-2453.21NAD(P)H-quinone oxidoreductase subunit M OS=Gloeob... [more]
NDHM_CYAP71.627e-2353.64NAD(P)H-quinone oxidoreductase subunit M OS=Cyanot... [more]
NDHM_SYNJB3.624e-2351.38NAD(P)H-quinone oxidoreductase subunit M OS=Synech... [more]
NDHM_SYNJA3.624e-2351.38NAD(P)H-quinone oxidoreductase subunit M OS=Synech... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-G08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754107 ID=EY754107; Name=EY754107; organism=Citrus sinensis; type=EST; length=872bp
AAAAAAGTTGTCCCAAGCTAAGCTACAAACACACCTTATAAAATGGCCAC
AACTTCCATTAACATGGCTTCTGCAAAATTCTCAATGTTGGGATGGATTG
GAGGGAAAAGAGAGCTGAAAAAGAAAAGGGTAATATCGATTTCAGCTCAG
CAACAAGCTGAAGTTGAAGAGTCACAATCACAGCAAGTGAAGGAGAATGA
AAACCAAGCTCAGGTGAAGCAGCAGCAGACACCGTTGAGGCCAGTGGAGC
CGCAGACAAATGTAAGGAGCAAAAATATGAGCAGAGAATATGGAGGGCAG
TGGCTGAGCTGTGCCACGAGACATGTGAGGATTTACGCCGCATATATTGA
TCCTGAAACCTGGGAATTTGATCAAACACAGATGGATAAGCTCACTCTTA
TTTTGGATCCTACTAAAGAATTTGTGTGGACTGATGAGAGTTGCAATAAG
GTTTTTGCTTATTTCCAGGAGCTTGTTGATCACTATGAGGGCGCCCTGTT
GACAGAATACACACTCCGGCTGATTGGTTCTGACTTAGAGCATTACATAC
GGAAGCTGCTATATGACGGGGAGATTAAATACAACATGGATGCAAGGGTA
CTAAACTTCAGCATGGGGAAGCCCCGTATCATGTTCAATAACAACGAACT
CCCAACTCAAGATGTTGCACAGTGATAGATTAAGGATCTTACAGAAATGG
GTAGTGAAATGAAAGCCAATATATCCAGATGTACCATGATGTTCCAAAAG
CATTCAAAGAGTTTCTCCAAGTGGCCTGTGTCCCTCAGAATATGCAAAAT
GCATCCTGTAAAAAACCTTCGTGATACAGCTTTGNTGTTTTGCTTACTGC
TCGCTAGGTCTATACCCTNATC
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