GE213239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_ARATH (V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.219e-50 Identity = 97/115 (84.35%), Postives = 110/115 (95.65%), Query Frame = 3 Query: 33 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESVA 377 SALIAMIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTT++QIEDAFKEF++R+DIAI+L+SQY+AN IRFLVDS+NKP+PAILEIPSKDHPYDPA DSVLSRVK L S ESV+ Sbjct: 12 SALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFKEFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVS 126
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_CAEEL (Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.779e-33 Identity = 64/114 (56.14%), Postives = 91/114 (79.82%), Query Frame = 3 Query: 27 AASALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVE 368 A ++A+I DEDTVVGFLL GVG ++ RK NYLIVD +TT+++IE+AF F +R+DIAI+LI+Q++A IR+ VD+H + IPA+LEIPSK+ PYDP++DS+L+R + L + E Sbjct: 5 AKGKILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIAIILINQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_DICDI (V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.357e-32 Identity = 64/108 (59.26%), Postives = 87/108 (80.56%), Query Frame = 3 Query: 33 SALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNL 356 +AL+A+I DED V GFLLAGVG D ++ N+L+VDSKT+ +IE AFK FT+R DIAI++I+Q VA+ IR+L+D +++ IP ILEIPSKDHPYDP +DSV+ +VK + Sbjct: 9 TALVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFTTRNDIAIIMITQKVADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVKKM 116
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_RAT (V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.162e-31 Identity = 59/112 (52.68%), Postives = 85/112 (75.89%), Query Frame = 3 Query: 39 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 374 LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R K + + E + Sbjct: 7 LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_MOUSE (V-type proton ATPase subunit F OS=Mus musculus GN=Atp6v1f PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 2.162e-31 Identity = 59/112 (52.68%), Postives = 85/112 (75.89%), Query Frame = 3 Query: 39 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 374 LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R K + + E + Sbjct: 7 LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_BOVIN (V-type proton ATPase subunit F OS=Bos taurus GN=ATP6V1F PE=3 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 4.817e-31 Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 3 Query: 39 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 374 LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R + + + E + Sbjct: 7 LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDL 118
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_HUMAN (V-type proton ATPase subunit F OS=Homo sapiens GN=ATP6V1F PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 6.291e-31 Identity = 58/112 (51.79%), Postives = 85/112 (75.89%), Query Frame = 3 Query: 39 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 374 LIA+I DEDTV GFLL G+G ++ R N+L+V+ TTI +IED F++F +R+DI I+LI+QY+A +R +D+H + IPA+LEIPSK+HPYD A+DS+L R + + + E + Sbjct: 7 LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGMFTAEDL 118
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_ANOGA (V-type proton ATPase subunit F OS=Anopheles gambiae GN=Vha14 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.402e-30 Identity = 60/116 (51.72%), Postives = 83/116 (71.55%), Query Frame = 3 Query: 39 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESVASDR 386 LI++I DEDT VGFLL GVG ++ R N+++VD T + +IED FK F R+DI I+LI+Q A IR ++DSH P PA+LEIPSKDHPYD ++DS+L R K + + E + ++R Sbjct: 11 LISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFIKRDDIDIILINQNYAELIRHVIDSHTAPTPAVLEIPSKDHPYDASKDSILRRAKGMFNPEDMIANR 126
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF_MANSE (V-type proton ATPase subunit F OS=Manduca sexta GN=VHA14 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.550e-29 Identity = 55/112 (49.11%), Postives = 82/112 (73.21%), Query Frame = 3 Query: 39 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 374 LI++I DEDT VGFLL G+G ++ R N+++VD T + +IE+ FK F R+DI I+LI+Q VA +R ++D+H P+P++LEIPSKDHPYD ++DS+L R K + + E + Sbjct: 11 LISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFVKRDDIDIILINQNVAELVRHVIDAHTAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPEDL 122
BLAST of GE213239 vs. ExPASy Swiss-Prot
Match: VATF1_DROME (V-type proton ATPase subunit F 1 OS=Drosophila melanogaster GN=Vha14 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.550e-29 Identity = 56/112 (50.00%), Postives = 81/112 (72.32%), Query Frame = 3 Query: 39 LIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTIKQIEDAFKEFTSREDIAIVLISQYVANRIRFLVDSHNKPIPAILEIPSKDHPYDPAQDSVLSRVKNLVSVESV 374 LI++I DEDT VGFLL GVG ++ R N+++VD T + ++ED FK F R+DI I+LI+Q A IR ++D+H P+PA+LEIPSKDHPYD ++DS+L R + + + E + Sbjct: 11 LISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSELEDCFKRFLKRDDIDIILINQNCAELIRHVIDAHTSPVPAVLEIPSKDHPYDASKDSILRRARGMFNPEDL 122 The following BLAST results are available for this feature:
BLAST of GE213239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213239 ID=GE213239; Name=GE213239; organism=Citrus sinensis; type=EST; length=505bpback to top |