EY754097

Overview
NameEY754097
Unique NameEY754097
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY754097 vs. ExPASy Swiss-Prot
Match: BH047_ARATH (Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.770e-39
Identity = 105/243 (43.21%), Postives = 136/243 (55.97%), Query Frame = 2 
Query:  149 MGSESSASLDEEVNVMVVDASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLANAVEVNQPNNGKACVLNEAARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXXXXXXXXXQIEVLQSELHARVVQSKPDLNIPP---------EFQQPELSSHFPG----DSYGFPAAVEPTLSQAPAVLXVPIHSDLQAYSASDVAQLTSK---PASNVSKPHARYPNPANXWPSHFLG 829
            M S++ ++  +E N     A+ D  C     K +VPKR++KA RE+LKREHLN+LF++LA+ +E+NQ N+GKA +L EA R LKD+F QIESL KE+ASLLSES YVT               +I  LQ+E+ AR  QSKPDLN  P         + Q PE  S FPG       GF  +   TL     VL +PI  D Q    S++ Q        +SNVSKP  RY + A+ W S  LG
Sbjct:    1 MVSKTPSTSSDEAN-----ATADERC----RKGKVPKRINKAVRERLKREHLNELFIELADTLELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEARANQSKPDLNTSPAPEYHHHHYQQQHPERVSQFPGLPIFQGPGFQQSA-TTLHPPATVLVLPIQPDPQTQDISEMTQAQQPLMFNSSNVSKPCPRYASAADSWSSRLLG 233
The following BLAST results are available for this feature:
BLAST of EY754097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH047_ARATH1.770e-3943.21Transcription factor bHLH47 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-F09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754097 ID=EY754097; Name=EY754097; organism=Citrus sinensis; type=EST; length=925bp
ATTAATTTTTTTAAATTCAAGCTTCGATAACTCCTGCTCTTATAAGGTTG
TTTTTTTTTTTTTCTAAAAAAAAAAAATCAACTTTCATTTTAGCGTTACC
CGAGGATTTTGCACAGGGATTCAAATCTCAAACTCATTTGAGACAGGCAT
GGGTTCTGAGTCTTCTGCTTCCTTGGATGAAGAGGTCAACGTCATGGTGG
TGGATGCATCAGTAGATGGGCATTGTCCGACCAAAAAGAATAAGAGCAGA
GTTCCTAAACGAGTTCACAAGGCTGAGAGGGAGAAACTGAAGCGCGAGCA
TTTGAATGATCTCTTTCTTGATCTTGCCAATGCTGTTGAAGTGAATCAGC
CAAACAATGGAAAGGCCTGTGTGTTGAATGAAGCAGCTAGACTATTGAAG
GACTTGTTTAGCCAGATTGAGTCACTAAATAAGGAGAATGCATCTCTCTT
GTCTGAATCTCACTACGTCACCATTGAGAAGAATGAATTGAAGGAGGAAA
ATTCTTCTCTTGAATCTCAAATTGAAGTTCTGCAAAGCGAACTACATGCA
AGGGTGGTACAATCTAAACCTGACTTGAATATACCTCCTGAATTTCAGCA
ACCAGAATTGTCTTCACATTTCCCGGGAGATAGCTATGGATTTCCTGCTG
CTGTAGAACCAACACTATCTCAAGCGCCTGCTGTCCTTGNCGTCCCCATC
CATTCTGACCTTCAAGCTTATTCAGCATCTGATGTTGCTCAACTCACATC
TAAACCCGCCTCAAATGTAAGCAAACCGCATGCTAGGTATCCCAACCCTG
CAAATNCCTGGCCTTCCCACTTCTTGGGGAGGACGTTTCTAGTACTAGGG
AAAATGCTGATAGAACAAATAAGCTTAACCTTGGAGCTCCTACCTTGTTT
TAGTAATGGCCGATTTGATATTTTG
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