EY754095

Overview
NameEY754095
Unique NameEY754095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY754095_ssr580 microsatellite EY754095_ssr580:580..594. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9353 contig Csv1_Contig9353:78..850. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY754095 vs. ExPASy Swiss-Prot
Match: Y3478_ARATH (UPF0424 protein At3g04780 OS=Arabidopsis thaliana GN=At3g04780 PE=1 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 8.503e-79
Identity = 144/176 (81.82%), Postives = 159/176 (90.34%), Query Frame = 2
Query:   29 MSAESTTAINRSIVDLLDFIDWSGVECLNHNTAHSLPNAIKQGYREDEGLYLESDADEQLLIYLPFTQVVKLHSIVVKGPEEEGPKTVKLFSNREHMGFSNVNDFPPSDTAVLTPDNLKGKPVVLKFVKFQNVRSLTIFIEDNQSDSEVTKVNKIALFGTTVETTDMKGLKKIEDN 556
            MSAES + I +  VDLLDFIDWSGVECLN +++HSLPNA+KQGYREDEGL LESDADEQLLIY+PF QV+KLHS  +KGPEEEGPKTVK FSN+EHM FSNVNDFPPSDTA LT +NLKGKPVVLK+VKFQNVRSLTIFIE NQS SEVTKV KIAL+G+TVETTDMKGLKKIED+
Sbjct:    1 MSAESASQIPKGQVDLLDFIDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQLLIYIPFNQVIKLHSFAIKGPEEEGPKTVKFFSNKEHMCFSNVNDFPPSDTAELTEENLKGKPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGSTVETTDMKGLKKIEDH 176          
BLAST of EY754095 vs. ExPASy Swiss-Prot
Match: TXNL1_HUMAN (Thioredoxin-like protein 1 OS=Homo sapiens GN=TXNL1 PE=1 SV=3)

HSP 1 Score: 122.865 bits (307), Expect = 1.988e-27
Identity = 67/170 (39.41%), Postives = 102/170 (60.00%), Query Frame = 2
Query:   47 TAINRSIVDLLDFIDWSGVECLNHNTAHSLPNAIKQGYREDEGLYLESDADEQLLIYLPFTQVVKLHSIVVKGPEE-EGPKTVKLFSNREH-MGFSNVNDFPPSDTAVLTPDNLKGKPVV-LKFVKFQNVRSLTIFIEDNQSDSEVTKVNKIALFGTTVETTDMKGLKKI 547
            T I +  +DL+ FI+ +G ECLN +  H   N +++     +  +LESD DEQLLI + F Q VKL+S+  +GP+  +GPK VK+F N    M F       P+    LT D++K   +V L++VKFQNV S+TIF++ NQ + E T+++     GT V+ T+M   K++
Sbjct:  117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDNCLRK-----DTTFLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTIFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281          
BLAST of EY754095 vs. ExPASy Swiss-Prot
Match: TXNL1_RAT (Thioredoxin-like protein 1 OS=Rattus norvegicus GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 5.784e-27
Identity = 66/170 (38.82%), Postives = 101/170 (59.41%), Query Frame = 2
Query:   47 TAINRSIVDLLDFIDWSGVECLNHNTAHSLPNAIKQGYREDEGLYLESDADEQLLIYLPFTQVVKLHSIVVKGPEE-EGPKTVKLFSNREH-MGFSNVNDFPPSDTAVLTPDNLKGKPVV-LKFVKFQNVRSLTIFIEDNQSDSEVTKVNKIALFGTTVETTDMKGLKKI 547
            T I +  +DL+ FI+ +G ECLN +  H   N +++        +LESD DEQLLI + F Q VKL+S+  +GP+  +GPK VK+F N    M F       P+    LT D++K   +V L++VKFQNV S+T+F++ NQ + E T+++     GT V+ T+M   K++
Sbjct:  117 TDIPKGYMDLMPFINKAGCECLNESDEHGFDNCLRKDLS-----FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281          
BLAST of EY754095 vs. ExPASy Swiss-Prot
Match: TXNL1_MOUSE (Thioredoxin-like protein 1 OS=Mus musculus GN=Txnl1 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.288e-26
Identity = 65/168 (38.69%), Postives = 100/168 (59.52%), Query Frame = 2
Query:   53 INRSIVDLLDFIDWSGVECLNHNTAHSLPNAIKQGYREDEGLYLESDADEQLLIYLPFTQVVKLHSIVVKGPEE-EGPKTVKLFSNREH-MGFSNVNDFPPSDTAVLTPDNLKGKPVV-LKFVKFQNVRSLTIFIEDNQSDSEVTKVNKIALFGTTVETTDMKGLKKI 547
            I +  +DL+ FI+ +G ECLN +  H   N +++        +LESD DEQLLI + F Q VKL+S+  +GP+  +GPK VK+F N    M F       P+    LT D++K   +V L++VKFQNV S+T+F++ NQ + E T+++     GT V+ T+M   K++
Sbjct:  119 IPKGYMDLMPFINKAGCECLNESDEHGFDNCLRKDMS-----FLESDCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVKFQNVNSVTLFVQSNQGEEETTRISYFTFIGTPVQATNMNDFKRV 281          
BLAST of EY754095 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23
Identity = 66/178 (37.08%), Postives = 96/178 (53.93%), Query Frame = 2
Query:   35 AESTTAINRSIVDLLDFIDWSGVECLNHNTAHSLPNAIKQGYREDEGLYLESDADEQLLIYLPFTQVVKLHSIV---VKGPEEEGPKTVKLFSNR-EHMGFSNVNDFPPSDTAVLTPDNLKGKPVV--LKFVKFQNVRSLTIFIEDNQSDSEVTKVNKIALFGTTVETTDMKGLKKIE 550
            A S++A  +    L   I+   +ECLN    H L    K  +  +   +LESD DEQL+IY+PF +VVK+HSI    VKG     PKT+KL+ N+  ++ F +   F P+            +P +  L+FVKFQ V SL IFI  N  + E TK++++ LFG  V  +    L+K+E
Sbjct:  116 ASSSSAPVKGFASLQGCIENPQLECLNQQDDHDL----KSAFNSNPSSFLESDVDEQLMIYIPFLEVVKVHSIAITPVKGETSSAPKTIKLYINQPNNLSFEDAESFTPTQVIEDIVYEQDDQPTIIPLRFVKFQRVNSLVIFIYSNVGEEETTKISRLELFGEPVGDSSKGKLQKVE 289          
BLAST of EY754095 vs. ExPASy Swiss-Prot
Match: U424_DROME (UPF0424 protein CG6153 OS=Drosophila melanogaster GN=CG6153 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 50/146 (34.25%), Postives = 72/146 (49.32%), Query Frame = 2
Query:   86 IDWSGVECLNHNTAHSLPNAIKQ-GYREDEGLYLESDADEQLLIYLPFTQVVKLHSIVVKGPEEEG-PKTVKLFSNREHMGFSNVNDFPPSDTAVLTPDNLKGKPVVLKFVKFQNVRSLTIFIEDNQSDSEVTKVNKIALFGTTVE 517
            ID   VECLN  T     +  K    R+D   Y+ESDADE+LL  +PFT  +KL  I++ G  ++  P  VK+F NR  M F +    P  +   LT D         K V F +V  L+++   N  + ++T++  I L G   E
Sbjct:   35 IDLDNVECLNEETDGQGKSVFKPYEKRQDLSKYVESDADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDARAKPDQEFQ-LTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGE-DITRIYYIGLRGEFTE 178          
The following BLAST results are available for this feature:
BLAST of EY754095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
Y3478_ARATH8.503e-7981.82UPF0424 protein At3g04780 OS=Arabidopsis thaliana ... [more]
TXNL1_HUMAN1.988e-2739.41Thioredoxin-like protein 1 OS=Homo sapiens GN=TXNL... [more]
TXNL1_RAT5.784e-2738.82Thioredoxin-like protein 1 OS=Rattus norvegicus GN... [more]
TXNL1_MOUSE1.288e-2638.69Thioredoxin-like protein 1 OS=Mus musculus GN=Txnl... [more]
TXL1_SCHPO1.021e-2337.08Thioredoxin-like protein 1 OS=Schizosaccharomyces ... [more]
U424_DROME2.359e-1234.25UPF0424 protein CG6153 OS=Drosophila melanogaster ... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-F07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754095 ID=EY754095; Name=EY754095; organism=Citrus sinensis; type=EST; length=772bp
CTCACTCGTTTGTCACGACCCATCAGCCATGTCTGCTGAATCAACCACGG
CAATTAACAGAAGCATAGTTGATCTATTGGACTTCATAGACTGGTCTGGA
GTTGAGTGCCTTAACCATAATACTGCTCATTCTCTTCCCAATGCAATCAA
ACAGGGTTACAGAGAAGATGAGGGTTTGTATCTGGAAAGTGATGCAGATG
AGCAACTTCTGATATATCTTCCTTTTACCCAAGTTGTGAAGCTTCATTCC
ATTGTCGTCAAAGGACCTGAGGAGGAAGGTCCTAAGACGGTGAAACTTTT
CTCAAACAGAGAACATATGGGATTCAGCAATGTCAATGATTTCCCCCCAA
GTGACACAGCTGTTTTGACCCCGGATAATCTCAAGGGAAAACCAGTGGTC
TTGAAGTTTGTCAAGTTTCAGAATGTTCGTAGTTTGACAATATTTATTGA
GGACAATCAGTCAGATTCTGAAGTCACAAAAGTTAACAAGATTGCACTGT
TTGGAACGACGGTTGAAACAACAGATATGAAGGGCTTGAAGAAGATCGAG
GACAATCACTGATCCTGGCAAAAGCAAATATGAAATGAAATGAATGAGAG
AACCCATATTGGCCTCCTGAAAGACGTGTTAAACATCTTCAGCTTTATCT
AAACTTCAGTTAATCCGAAGTATAAAACACTTTGCTGCATGATTTTGGAA
AAAAAAATTTCATCTCATTGTCCCAAGTTTTTTCTTTGGCAATCATATCA
TCTATGTGATTGAATTTGNGGT
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