EY727890

Overview
NameEY727890
Unique NameEY727890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1017
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY727890 vs. ExPASy Swiss-Prot
Match: Y5957_ARATH (Uncharacterized protein At5g39570 OS=Arabidopsis thaliana GN=At5g39570 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 6.340e-25
Identity = 73/160 (45.62%), Postives = 82/160 (51.25%), Query Frame = 3 
Query:   24 GRPRVRPPSDETCYPSSSASDGDFDYARPKFSSHSEPSAYADEALNNEYSSYARPKXXXXXXXXXXXXXXXXXXXXXXXAYGIQPGMGRXXXXXXXXXXXXXXXXXAKRPDSQEYGSGYGKRPESE-EYGSG--------YGRKPDSEVYGSGYGRRPES 476
            GRP   PPSDETCYP SS  D DF+Y RP+F+   EPSAY DEALN EYSSY+RPK                        YG + G GR                   R   Q YGSGYG R E+E EYGSG        YGR+P+S + GSGYG R ES
Sbjct:   33 GRPI--PPSDETCYPLSSGVDDDFEYERPEFTQIHEPSAYGDEALNTEYSSYSRPK-PRPAFRPDSGGGGHVQGERPNPGYGSESGYGRKPESEYGSGYGGQTEVEYGRRPEQSYGSGYGGRTETESEYGSGGGGRTEVEYGRRPESGL-GSGYGGRSES 188
The following BLAST results are available for this feature:
BLAST of EY727890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5957_ARATH6.340e-2545.63Uncharacterized protein At5g39570 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-H05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727890 ID=EY727890; Name=EY727890; organism=Citrus sinensis; type=EST; length=1017bp
GGGTACGGGTCCGGGAATTTCCGGGTCGACCCCGCGTCCGGCCACCGTCC
GATGAGACTTGTTACCCATCATCGTCGGCGTCAGATGGGGACTTCGACTA
CGCTCGTCCCAAGTTCTCGTCGCACTCGGAGCCTTCAGCCTACGCTGACG
AAGCTCTCAATAACGAGTACAGCTCCTACGCCCGACCAAAGCCTCGTCCC
GGTTTCGTACCCGGGTCAGGGGGTGGGTCGGGTTATGGAGGAAGGCCCCA
GCCGCAGCCGGCGTATGGGATTCAGCCTGGAATGGGAAGGCCCGAACCTT
ATGGGTCGGGGAGGTCTGAATCTGAATATGGTTCTGGGTATGCGAAGAGG
CCTGATTCGCAGGAATATGGATCTGGGTACGGAAAGAGACCCGAGTCGGA
GGAATATGGATCTGGGTACGGCAGGAAACCTGATTCCGAGGTGTATGGCT
CTGGATATGGGCGGAGACCCGAGTCGGGGTGATCCGGATTTTGGTGGTAG
GACTGAGTCCGAGTATGGAGGATCAGCGTATGGACGAAAACCCCCGAATT
ATGAGTCCCGGTTATGGGCCAGAAAACCGGAATATGAATCTGGTTTTGGG
GGGAAAACCCGGGGTACGAATTCTGGATATTGGAACCAAACCCGAATTTT
GAATCCCGGAATTTGGGGTAGAAAACCCGAATACCAATTCCTGGGGACGG
GGAGCAAAGCCGGGAATTTAGATCCCGGGGGCTTGGGGAGGAAAAACCCA
AAGTAGAAATCCCGGGGTACCGGGAAAAAACCATGAAAGAAAGGGGCCGG
GTTAGGGGAAAAAACCCCCATGGAATTTGGGCTATTGGGGGGAAAAACCC
AATATAAGGGTTCGGGGTGAGGGGGGGCCAAAACGGGGAATAGAGATCCC
GGGGATGGGGGGGGGGAACGACCCAAAGATTAATTCCCTGGGGTTTGGGG
AATGAATCGCCCCGGATTTTAGCGAACTGGTGGGTCGTGGTGGAAGATGA
ACCATTATAGTTTTTTA
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