EY754082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS_LACSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 1.078e-66 Identity = 117/165 (70.91%), Postives = 135/165 (81.82%), Query Frame = 2 Query: 74 VATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFI 568 +AT NR + QAS+ APFTGLKS+ AFP TKK NND +S+ NGGRVQCMKVWPP GLKK+ETLSYLPPLSDEAL KEI+YLI + WIPCLEFELE G+VYREHH SPGYYDGRYWTMWKLPM+GC D+ QV+ VGE EYP++F+R++GF RQ ISFI Sbjct: 9 IATVNRTTSTQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQVQCISFI 173
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.839e-66 Identity = 117/166 (70.48%), Postives = 137/166 (82.53%), Query Frame = 2 Query: 74 VATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 V T NRAS AQA++VAPFTGLKSS+ FP TKKTNNDITSIA NGGRV CM+VWPP G KKFETLSYLPPL++E L KE+ YLI GWIPCLEFELEKG+VYRE+H+SPGYYDGRYWTMW+LP++G D++QVL + + EYP SF+R++GF RQ ISFIA Sbjct: 9 VTTVNRASSAQANLVAPFTGLKSSAGFPVTKKTNNDITSIASNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIA 174
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.192e-65 Identity = 119/167 (71.26%), Postives = 140/167 (83.83%), Query Frame = 2 Query: 71 TVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 TVAT +RA+ AQA+MVAPFTGLKS++AFPAT+K+NNDITS+A NGGRVQCMKVWPP GL+KFETLSYLPPLS E+L K+I YLI GWIPCLEFELE +VYRE+++SPGYYDGRYW MWKLPM+GC DATQVL + E YP S +R++GF +RQ ISFIA Sbjct: 10 TVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIA 176
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS_BETVE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 4.530e-65 Identity = 118/167 (70.66%), Postives = 138/167 (82.63%), Query Frame = 2 Query: 71 TVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 TVA +RAS AQ+SMVAPFT LKS+SAFP T+KTNNDITSIA NGGRVQCM+VWPP GLKKFETLSYLPPLS E L KE++YL+ IPCLEFELE G+VYREH++SPGYYDGRYWTMWKLPM+GC D++QVL + E YP +F+R++GF +RQ ISFIA Sbjct: 10 TVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQIISFIA 176
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS3_SOLTU (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Solanum tuberosum GN=RBCS-3 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 6.541e-64 Identity = 114/168 (67.86%), Postives = 138/168 (82.14%), Query Frame = 2 Query: 71 TVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 + A A R+++AQASMVAPFTGLKS+++FP TKK NN DITS+A NGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+ +GW+PCLEFE E G+VYRE+HKSPGYYDGRYWTMWKLPM+GC DATQVL V E YP +++R++GF RQ ISFIA Sbjct: 8 SAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQVQCISFIA 175
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.457e-63 Identity = 118/169 (69.82%), Postives = 138/169 (81.66%), Query Frame = 2 Query: 71 TVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 TVAT A+R + AQA MVAPF GLKSSSAFP T+K+N DITSIA NGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+ W+PCLEFELE G+VYRE+H+SPGYYDGRYWTMWKLPM+GC D++QVL + E YP SF+R++GF RQ ISFIA Sbjct: 10 TVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIA 177
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 4.240e-63 Identity = 118/169 (69.82%), Postives = 138/169 (81.66%), Query Frame = 2 Query: 71 TVAT--ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 TVAT A+R + AQA MVAPFTGLKSSSA P T+K+N DITSIA NGGRVQCM+VWPP GLKKFETLSYLPPLS E+L KE++YL+ W+PCLEFELE G+VYRE+H+SPGYYDGRYWTMWKLPM+GC D++QVL + E YP SF+R++GF RQ ISFIA Sbjct: 10 TVATVSADRPAPAQARMVAPFTGLKSSSASPVTRKSN-DITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIA 177
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 5.537e-63 Identity = 113/167 (67.66%), Postives = 134/167 (80.24%), Query Frame = 2 Query: 71 TVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 + A A R+++AQA+MVAPFTGLKS+++FP ++K N DITSIA NGGRVQCM+VWPP KK+ETLSYLP LS E LL EI YL+ SGW+PCLEFE E+G+VYREHH SPGYYDGRYWTMWKLPM+GC DATQVL V E YP ++VR++GF RQ ISFIA Sbjct: 8 SAAVATRSNVAQANMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIA 174
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS2A_SOLLC (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum lycopersicum GN=RBCS-2A PE=2 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 7.232e-63 Identity = 114/167 (68.26%), Postives = 133/167 (79.64%), Query Frame = 2 Query: 71 TVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 + A A R+++ QASMVAPFTGLKSS+ FP TKK N DITSIA NGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+ +GW+PCLEFE E G+VYRE++KSPGYYDGRYWTMWKLPM+GC DATQVL V E YP ++VR++GF RQ ISFIA Sbjct: 8 SAAVATRSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIA 174
BLAST of EY754082 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 7.232e-63 Identity = 112/168 (66.67%), Postives = 136/168 (80.95%), Query Frame = 2 Query: 71 TVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIACNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIPSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCXDATQVLN*VGEVPXEYPHSFVRLVGFVPRRQGPGISFIA 571 + A A R+++AQASMVAPFTGLKS+++FP TKK NN DITS+A NGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+ +GW+PCLEFE E G+VYREH+ SPGYYDGRYWTMWKLPM+GC D TQVL V E YP +++R++GF RQ ISFIA Sbjct: 8 SAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIA 175 The following BLAST results are available for this feature:
BLAST of EY754082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >EY754082 ID=EY754082; Name=EY754082; organism=Citrus sinensis; type=EST; length=817bpback to top |