EY727859

Overview
NameEY727859
Unique NameEY727859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length980
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY727859 vs. ExPASy Swiss-Prot
Match: WAX2_ARATH (Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.035e-33
Identity = 72/154 (46.75%), Postives = 98/154 (63.64%), Query Frame = 1 
Query:  298 MDAPLAAWPWDNLGMFKYVLYGPLVGKALYSWVYEDKRIEY-WCLHILIISVLRGLIHILWNSFSNMLFLNRARQINQRGVDFKQIDNEWKWDNFILLSAAFASMG*YIFP----CSETLPP*NPKGIIWPTKPSWGLFPNPLFYVLPQLFPKN 744
            M A L+AWPW+N G  KY+LY PL  + +YSWVYE+   +  WC+HILII  L+ L+H LW+ F+NMLF+ R  +IN +G+DFKQID+EW WDN+I+L A   S+  Y+ P       +LP  N KG+I         F  PL+Y L + F +N
Sbjct:    1 MVAFLSAWPWENFGNLKYLLYAPLAAQVVYSWVYEEDISKVLWCIHILIICGLKALVHELWSVFNNMLFVTRTLRINPKGIDFKQIDHEWHWDNYIILQAIIVSLICYMSPPLMMMINSLPLWNTKGLI-ALIVLHVTFSEPLYYFLHRSFHRN 153
The following BLAST results are available for this feature:
BLAST of EY727859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WAX2_ARATH6.035e-3346.75Protein WAX2 OS=Arabidopsis thaliana GN=WAX2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-E08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727859 ID=EY727859; Name=EY727859; organism=Citrus sinensis; type=EST; length=980bp
CCACGCGTCCGTATAAACGGTTTTTCTAGAAGAAGAGAAAGTTAATCAAG
ATCAAGATCAACTCGGCTTCATAATTCTTGTTTGATTAAGCTGCCTATAT
ACGTAGGTGTAGGTGTCAAGGAGCTGCCTATCCGTAATAAGATACTATAA
ATAGTTTTTCTTGAAGAAGAGAAGTTGATCAAGATCAACTCTGCTTGACA
ATTCTTGATTAATTGAACTTCTCTTTCTTCAGGAATTTGCAATATTATAC
ACTCGCATTCAAAGGAATTATTTAAAAGAAAGATTTAGAGAACTAGGATG
GATGCTCCTTTGGCAGCTTGGCCATGGGATAACCTAGGCATGTTCAAGTA
TGTGCTGTATGGACCACTCGTCGGAAAAGCTTTATACTCATGGGTTTATG
AAGATAAACGAATTGAATATTGGTGCCTCCATATTCTGATCATCTCCGTG
CTTAGAGGACTGATTCATATCTTATGGAACTCTTTCAGTAACATGCTTTT
CCTTAATCGTGCTCGCCAGATTAATCAACGGGGAGTCGATTTCAAGCAGA
TTGATAATGAATGGAAATGGGATAATTTCATTCTACTTTCAGCTGCATTT
GCATCCATGGGCTAATACATCTTTCCATGCTCTGAAACCCTTCCCCCATG
AAACCCAAAAGGGATTATTTGGCCTACAAAACCTTCCTGGGGGCTGTTTC
CAAACCCTTTATTTTACGTTTTACCCCAACTTTTTCCCAAAAATAAAAAT
ACTTTTTCCCCCCTTTACCCCTCCCTCCCCCCCTTTCTTCCCCCAGTAAC
CAAAAATTTCCAAAAGGCGGGGGGCTGGGGAAAATTTTTTGGGAACCCAA
TTTGAATTTAAGGTGGTCCCCCCGTTTGGAAATTCCCCATTTTTCTGCGG
GAATTTTCTTTCCCCCGCCGGGAAAGGGGGGATAAAAAAAAAACCCTTGG
GTGTTTTTTATGGGGGGTAAATTTTTTTTT
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