EY727858

Overview
NameEY727858
Unique NameEY727858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.262e-32
Identity = 79/115 (68.70%), Postives = 83/115 (72.17%), Query Frame = 1
Query:  106 MASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEE 450
            MASVTGTS  M S   S   +  R            GKSF  LRMRSA RF V CAAKPETV+KVC IVKKQLALP D+ VTGESKFA LGADSLDTVEIVMGLEEEFGI+VEEE
Sbjct:    1 MASVTGTSISMASFKASLAPS--RVSNLRSVSLPIKGKSFAPLRMRSA-RFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEE 112          

HSP 2 Score: 23.483 bits (49), Expect = 2.262e-32
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  431 GSALKKKSAQTISTVQDA 484
            G  ++++SAQ+I+TVQDA
Sbjct:  106 GINVEEESAQSIATVQDA 123          

HSP 3 Score: 21.557 bits (44), Expect = 2.262e-32
Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  486 ANLIEKLIETKS 521
            A+LIEKLIE KS
Sbjct:  124 ADLIEKLIEKKS 135          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.972e-29
Identity = 71/114 (62.28%), Postives = 77/114 (67.54%), Query Frame = 1
Query:  109 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEE 450
            ++  G S C+ S SCS     GR             KSFPSLR       RVSC AKPETV KVC+IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGLEEEFGISVEEE
Sbjct:    3 SAAAGASICIKSASCS-PLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEE 115          

HSP 2 Score: 24.2534 bits (51), Expect = 4.972e-29
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  431 GSALKKKSAQTISTVQDA 484
            G +++++SAQ+I TVQDA
Sbjct:  109 GISVEEESAQSIQTVQDA 126          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.723e-27
Identity = 68/117 (58.12%), Postives = 76/117 (64.96%), Query Frame = 1
Query:  109 ASVTGTSACMTSLSCSFKQTQ--GRXXXXXXXXXXXXGKSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEE 450
            A+   +  C+ S SCS  + Q                GK FPSLR    P  FRV C AK ETV +VC+IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGLEEEFGISVEEE
Sbjct:    4 AAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEE 120          

HSP 2 Score: 24.2534 bits (51), Expect = 9.723e-27
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  431 GSALKKKSAQTISTVQDA 484
            G +++++SAQ+I TVQDA
Sbjct:  114 GISVEEESAQSIQTVQDA 131          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 9.739e-27
Identity = 70/115 (60.87%), Postives = 78/115 (67.83%), Query Frame = 1
Query:  109 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRM-RSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEE 450
            ++  G S C+ S S S     GR             KSFPSL+  +S+   RVSC AKPETV KVC IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGLEEEFGISVEEE
Sbjct:    3 SAAAGASICIKSASFS-PLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEE 116          

HSP 2 Score: 24.2534 bits (51), Expect = 9.739e-27
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  431 GSALKKKSAQTISTVQDA 484
            G +++++SAQ+I TVQDA
Sbjct:  110 GISVEEESAQSIQTVQDA 127          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.310e-25
Identity = 67/114 (58.77%), Postives = 76/114 (66.67%), Query Frame = 1
Query:  109 ASVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEE 450
            ++   +S C+ S SCS     GR             KSF S   R +   RV+C AKPETV KVC IVKKQLALP D+ V+G SKF+ALGADSLDTVEIVMGLEEEFGISVEEE
Sbjct:    3 SAAPASSICIKSASCS-ALAPGRISSLRSVSLPVSRKSFFS--RRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEE 113          

HSP 2 Score: 24.2534 bits (51), Expect = 2.310e-25
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  431 GSALKKKSAQTISTVQDA 484
            G +++++SAQ+I TVQDA
Sbjct:  107 GISVEEESAQSIQTVQDA 124          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP2_HORVU (Acyl carrier protein 2, chloroplastic OS=Hordeum vulgare GN=ACL1.2 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.803e-21
Identity = 54/74 (72.97%), Postives = 58/74 (78.38%), Query Frame = 1
Query:  229 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEE 447
            S R++  P RF V CAAK ETV+KVC IVK QLAL  DT V+G S FA LGADSLDTVEIVMGLEE FGISVEE
Sbjct:   34 SFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSTFADLGADSLDTVEIVMGLEEAFGISVEE 107          

HSP 2 Score: 24.6386 bits (52), Expect = 1.803e-21
Identity = 10/18 (55.56%), Postives = 16/18 (88.89%), Query Frame = 2
Query:  431 GSALKKKSAQTISTVQDA 484
            G ++++ SAQTI+TV+DA
Sbjct:  102 GISVEESSAQTIATVEDA 119          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP2_ARATH (Acyl carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=ACL1.2 PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.038e-20
Identity = 53/80 (66.25%), Postives = 61/80 (76.25%), Query Frame = 1
Query:  217 KSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEEK 453
            +S  S  +R  P R  VSCAAKPETVDKVC +V+KQL+L     +T  +KFAALGADSLDTVEIVMGLEEEFGI + EEK
Sbjct:   34 RSSLSFNLRQLPTRLTVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEK 113          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP1_HORVU (Acyl carrier protein 1, chloroplastic OS=Hordeum vulgare GN=ACL1.1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.263e-20
Identity = 56/88 (63.64%), Postives = 64/88 (72.73%), Query Frame = 1
Query:  220 SFPSLRMR-SAPRFRVSCAA------KPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEEKCPD 462
            SF S+  R S+ RF++ CAA      K ETVDKVC IVKKQLA+P  T VT ESKF+ LGADSLDTVEIVMGLEEEF I+V+E    D
Sbjct:   42 SFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPVTAESKFSELGADSLDTVEIVMGLEEEFNITVDETSAQD 129          

HSP 2 Score: 21.1718 bits (43), Expect = 2.263e-20
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  486 ANLIEKLIETKSA 524
            ANLIEKL+  K+A
Sbjct:  137 ANLIEKLVTEKTA 149          

HSP 3 Score: 20.4014 bits (41), Expect = 2.263e-20
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  452 SAQTISTVQDA 484
            SAQ I+TVQDA
Sbjct:  126 SAQDIATVQDA 136          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP1_SPIOL (Acyl carrier protein 1, chloroplastic OS=Spinacia oleracea GN=ACL1.1 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 59/117 (50.43%), Postives = 72/117 (61.54%), Query Frame = 1
Query:  112 SVTGTSACMTSLSCSFKQTQGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEEKCPD 462
            S T T     S S   K +QG               SFP+LR  ++ R     AAK ET+DKVC IVK++LAL AD  VT +S+F+ LGADSLDTVEIVM LEEEFGI+V+E+K  D
Sbjct:    5 SATTTVRVQPSSSSLHKLSQGNGRCSSIVCLDWGKSSFPTLR--TSRRRSFISAAKKETIDKVCDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQD 119          
BLAST of EY727858 vs. ExPASy Swiss-Prot
Match: ACP3_ARATH (Acyl carrier protein 3, chloroplastic OS=Arabidopsis thaliana GN=ACL1.3 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.729e-20
Identity = 51/76 (67.11%), Postives = 58/76 (76.32%), Query Frame = 1
Query:  229 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLEEEFGISVEEEK 453
            S  +R  P R  V CAAKPETVDKVC +V+KQL+L     +T  +KFAALGADSLDTVEIVMGLEEEFGI + EEK
Sbjct:   38 SFNLRQLPTRLTVYCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDTVEIVMGLEEEFGIEMAEEK 113          
The following BLAST results are available for this feature:
BLAST of EY727858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
ACP1_CASGL2.262e-3268.70Acyl carrier protein 1, chloroplastic OS=Casuarina... [more]
ACP4_CUPLA4.972e-2962.28Acyl carrier protein 4, chloroplastic OS=Cuphea la... [more]
ACP3_CUPLA9.723e-2758.12Acyl carrier protein 3, chloroplastic OS=Cuphea la... [more]
ACP1_CUPLA9.739e-2760.87Acyl carrier protein 1, chloroplastic OS=Cuphea la... [more]
ACP2_CUPLA2.310e-2558.77Acyl carrier protein 2, chloroplastic OS=Cuphea la... [more]
ACP2_HORVU1.803e-2172.97Acyl carrier protein 2, chloroplastic OS=Hordeum v... [more]
ACP2_ARATH1.038e-2066.25Acyl carrier protein 2, chloroplastic OS=Arabidops... [more]
ACP1_HORVU2.263e-2063.64Acyl carrier protein 1, chloroplastic OS=Hordeum v... [more]
ACP1_SPIOL2.313e-2050.43Acyl carrier protein 1, chloroplastic OS=Spinacia ... [more]
ACP3_ARATH6.729e-2067.11Acyl carrier protein 3, chloroplastic OS=Arabidops... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-E07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727858 ID=EY727858; Name=EY727858; organism=Citrus sinensis; type=EST; length=897bp
CTCTCAGTCTCAGACACACATTACATAGCACGCAGTCTTCGTGCTCTTCG
TCGTCCTCTCTCTCGCTCTCTCTCTTTTCAACTTCAAATCTCAGATCTCT
ATTCAATGGCTTCAGTTACAGGAACTTCAGCCTGCATGACCTCTCTGTCT
TGCTCTTTCAAGCAGACCCAGGGTAGGATCTCTAGTGTGAATTCAGTTTC
ACTTTCCATCAATGGGAAAAGCTTCCCATCCCTTAGAATGCGATCAGCAC
CCCGCTTCCGGGTTTCCTGTGCGGCCAAGCCAGAGACCGTGGATAAGGTT
TGTCAAATTGTGAAGAAGCAGTTGGCACTCCCAGCAGATACTACCGTTAC
CGGAGAGTCAAAATTCGCTGCCCTTGGAGCTGATTCTCTTGATACGGTTG
AGATTGTGATGGGACTGGAGGAGGAATTTGGGATCAGCGTTGAAGAAGAA
AAGTGCCCAGACCATCTCAACCGTTCAAGATGCCTGCAAATCTGATTGAG
AAGCTCATTGAAACCAAGAGTGCTTAATTTAAAAGGGTCTGGGAAAAGAG
CCGGGGCTTAAGGGACTTAATTCGCCTAGTTTCCTTTTTCCAATCTTTTT
GTTGGGCTGTCCCCAGGGAGTTTTCCAGCTTTGTTTTGGGAAATTTGGTC
AGGGGTTTTTTTCCTATTCTGGTTGTTCCCTTTCTATAAAAAAAAAACTC
CATTTAAACCAGTTTTGGCTTTGGGGAAATCAACCCAAAAAACTGGTTCC
CGTTTTTTCGGGGGTGGGGGAACCCCGGGTTATTCCCGGTTTCCCAAAAA
AATTCCCATTCCAGGGGGGGAAAAAAACAATTTTTTTTTTTGGGGGCCAC
GAAAAGTATTAGAGAAAAAAAAAAGAAAGAAAAAAATAAGAAAGACA
back to top