EY727853

Overview
NameEY727853
Unique NameEY727853
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1010
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: NUD25_ARATH (Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT25 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.361e-26
Identity = 60/77 (77.92%), Postives = 66/77 (85.71%), Query Frame = 3
Query:  264 DNLRIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCEEPK*IV*WGGE 494
            DNL +FVASRLNVPGAWQMPQGGIEDGEDPK AAMREL+EETG+VSAEI++EVPNWLTYDFP    + K    WGGE
Sbjct:   20 DNL-VFVASRLNVPGAWQMPQGGIEDGEDPKSAAMRELQEETGVVSAEIVSEVPNWLTYDFPPAV-KAKVNRLWGGE 94          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: NUD26_ARATH (Nudix hydrolase 26, chloroplastic OS=Arabidopsis thaliana GN=NUDT26 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 8.567e-22
Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 3
Query:  273 RIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCEEPK*IV*WGGEMAWK 506
            +IF ASRL++P AWQMPQGGI++GEDP++A MREL+EETG+ SAEI+AE P+W+TYDFP    E K  V WG +  WK
Sbjct:   77 KIFTASRLDIPSAWQMPQGGIDEGEDPRVAVMRELKEETGVHSAEILAEAPHWITYDFPPDVRE-KLKVRWGSD--WK 151          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: NUD27_ARATH (Nudix hydrolase 27, chloroplastic OS=Arabidopsis thaliana GN=NUDT27 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 8.865e-19
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 3
Query:  273 RIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 449
            +IF AS++++P  WQMPQGG ++GED + AA RELREETG+ SAE IAE+PNWLTYDFP
Sbjct:   76 KIFTASKIHIPDTWQMPQGGADEGEDLRNAAFRELREETGVTSAEFIAEIPNWLTYDFP 134          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: RPPH_NITSB (RNA pyrophosphohydrolase OS=Nitratiruptor sp. (strain SB155-2) GN=rppH PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.034e-14
Identity = 34/60 (56.67%), Postives = 44/60 (73.33%), Query Frame = 3
Query:  270 LRIFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFP 449
            +  F+A+R +VP +WQ PQGGI+ GE PK A +REL+EE G    EIIAE P W++YDFP
Sbjct:   23 VEFFIAARSDVPDSWQFPQGGIDKGESPKEALLRELKEEIGTDKIEIIAEFPEWVSYDFP 82          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: RPPH_HELPS (RNA pyrophosphohydrolase OS=Helicobacter pylori (strain Shi470) GN=rppH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.121e-13
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  276 IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCE 461
            IF+A R+++ GAWQ PQGGI++GE P  A  REL EE G    EI+A+ P W+ YDFPS  E
Sbjct:   25 IFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNME 86          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: RPPH_HELPJ (RNA pyrophosphohydrolase OS=Helicobacter pylori J99 GN=rppH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.121e-13
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  276 IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCE 461
            +F+A R+++ GAWQ PQGGI++GE P  A  REL EE G    EI+A+ P W+ YDFPS  E
Sbjct:   25 VFIAERIDIEGAWQFPQGGIDEGETPLEALYRELLEEIGTNEIEILAQYPRWIAYDFPSNME 86          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: RPPH_HELP2 (RNA pyrophosphohydrolase OS=Helicobacter pylori (strain P12) GN=rppH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.121e-13
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  276 IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCE 461
            +F+A R+++ GAWQ PQGGI++GE P  A  REL EE G    EI+A+ P W+ YDFPS  E
Sbjct:   25 VFIAERIDIEGAWQFPQGGIDEGETPLEALYRELLEEIGTNEIEILAQYPRWIAYDFPSNME 86          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: RPPH_HELPY (RNA pyrophosphohydrolase OS=Helicobacter pylori GN=rppH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  276 IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCE 461
            +F+A R+++ GAWQ PQGGI++GE P  A  REL EE G    EI+A+ P W+ YDFPS  E
Sbjct:   25 VFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNME 86          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: RPPH_HELPH (RNA pyrophosphohydrolase OS=Helicobacter pylori (strain HPAG1) GN=rppH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  276 IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCE 461
            +F+A R+++ GAWQ PQGGI++GE P  A  REL EE G    EI+A+ P W+ YDFPS  E
Sbjct:   25 VFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNME 86          
BLAST of EY727853 vs. ExPASy Swiss-Prot
Match: RPPH_HELPG (RNA pyrophosphohydrolase OS=Helicobacter pylori (strain G27) GN=rppH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.465e-13
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  276 IFVASRLNVPGAWQMPQGGIEDGEDPKLAAMRELREETGIVSAEIIAEVPNWLTYDFPSTCE 461
            +F+A R+++ GAWQ PQGGI++GE P  A  REL EE G    EI+A+ P W+ YDFPS  E
Sbjct:   25 VFIAERIDIEGAWQFPQGGIDEGETPLEALHRELLEEIGTNEIEILAQYPRWIAYDFPSNME 86          
The following BLAST results are available for this feature:
BLAST of EY727853 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
NUD25_ARATH3.361e-2677.92Nudix hydrolase 25 OS=Arabidopsis thaliana GN=NUDT... [more]
NUD26_ARATH8.567e-2262.82Nudix hydrolase 26, chloroplastic OS=Arabidopsis t... [more]
NUD27_ARATH8.865e-1967.80Nudix hydrolase 27, chloroplastic OS=Arabidopsis t... [more]
RPPH_NITSB5.034e-1456.67RNA pyrophosphohydrolase OS=Nitratiruptor sp. (str... [more]
RPPH_HELPS1.121e-1354.84RNA pyrophosphohydrolase OS=Helicobacter pylori (s... [more]
RPPH_HELPJ1.121e-1353.23RNA pyrophosphohydrolase OS=Helicobacter pylori J9... [more]
RPPH_HELP21.121e-1353.23RNA pyrophosphohydrolase OS=Helicobacter pylori (s... [more]
RPPH_HELPY1.465e-1353.23RNA pyrophosphohydrolase OS=Helicobacter pylori GN... [more]
RPPH_HELPH1.465e-1353.23RNA pyrophosphohydrolase OS=Helicobacter pylori (s... [more]
RPPH_HELPG1.465e-1353.23RNA pyrophosphohydrolase OS=Helicobacter pylori (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-E02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727853 ID=EY727853; Name=EY727853; organism=Citrus sinensis; type=EST; length=1010bp
TTTTCTTTAATTTTTTTTAAAATCTTAAATATTCACCCTCTTTTTCGTCA
TTAGAATTGAAGAGTAGTTTATTATGTGTTTATATGTGTGTTTGTTTTTG
TAGCAAAATTTATTATGTGTTTAAATCTGGATGCTGATTTTACAGAAGCT
GTTTTTCTTTCTATGAGAGCATTTATATAAGAGTAATTAAAATAATTTAT
TGAAAAGCACTATTATATGATTTTTTTTACCCCCTCGAATTCTCGGAAGT
TCATACCATAAAGGATAATTTAAGGATTTTTGTGGCGTCTAGATTGAATG
TTCCGGGAGCATGGCAGATGCCTCAGGGGGGTATTGAAGACGGTGAGGAC
CCCAAATTGGCAGCCATGAGGGAACTGCGAGAAGAAACCGGAATAGTGTC
CGCTGAAATTATTGCTGAGGTACCAAATTGGTTGACTTATGACTTCCCCT
CCACCTGTGAAGAACCAAAGTAAATCGTCTAATGGGGAGGTGAAATGGCA
TGGAAAAACCCCGGAAGGGGGTTTCTCTTGAAATTAAATAATGGAAAAAA
GTGGAAATAAACTTGCCAAAAGGGTGAAACCAAAACCCTGAATTTTCCAA
ATTGGAAAATGGGCCAAAGTCCTGAGAAAAAATTTTTTAAAAGGGCAAAG
GGATATAAAAACCGGCCAACCGATACGCGGGAAAGATATAGAAAAACTTT
TTAGGCCCTTACATTTGGAATAGAAAACGGAAATAAACAGGGAAAAAAGG
GAAAATAAACGAACAAAGTGAGGAAAAGAGCGTAGAGGGAATATGCCTTT
TTTCAAAAATATTCACCCACAAAATTGAGAAAAATGTTATTTTCCAAAGA
AAAATAGAGAGGGCCACAGACGAATAATAGGTGATATTTCTTTTATTTAC
AAAAAACGGAAAGAACGGGAGATTGATTATAAAGATGCATACCATAACTC
CAACCTACAATAAATTTGGGTCCATTTTATTATATGAAATATGTGATAAA
TACATTTAAA
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