EY727847

Overview
NameEY727847
Unique NameEY727847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1025
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.059e-27
Identity = 74/159 (46.54%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  199 MCYEQKEVGNGVAGEGHGLGSSEEDESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIV---PNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMA 666
            MC+   E G+ V  E    GSSEEDE RV+D   + N     +Q+               V++WER+LP RSLKVLLVENDDSTRH+V+ALL+NCSYEVTAV + L AW+ILED  + ID+V    +   H+        ++K+   KTLKNIPV  M+
Sbjct:    1 MCFNNIETGDEVETERQVFGSSEEDEFRVEDTARNTNN----VQISQ-----QQQQPLAHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHS----GTGLLSKIMSHKTLKNIPVIMMS 146          
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.899e-22
Identity = 69/168 (41.07%), Postives = 89/168 (52.98%), Query Frame = 1
Query:  214 KEVGNGVAGEGHGLGSSEED--ESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVPNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMAP*KF*GAKFF*CLTK 711
            K  GNG+   GH   S EE+      +D  N ++ P    Q  +             ++RWERFLP ++L+VLLVENDDSTR VVSALLR C YEV    N LHAW+ LEDL NHID+V         +     ++K+   K  K+IPV  M+     G   F CL+K
Sbjct:   18 KGTGNGILENGHSHKSEEEEWRNGMGEDLPNGHSTPPEPQQTDE------QKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMP-RLSGIGLLSKITSHKICKDIPVIMMSSNDSMGT-VFKCLSK 177          
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.134e-21
Identity = 68/168 (40.48%), Postives = 88/168 (52.38%), Query Frame = 1
Query:  214 KEVGNGVAGEGHGLGSSEED--ESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVPNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMAP*KF*GAKFF*CLTK 711
            K  GNG+   GH     EE+      +D  N ++ P    Q  +             ++RWERFLP ++L+VLLVENDDSTR VVSALLR C YEV    N LHAW+ LEDL NHID+V         +     ++K+   K  K+IPV  M+     G   F CL+K
Sbjct:   18 KGTGNGILENGHSHKPEEEEWRNGMGEDLPNGHSTPPEPQQTDE------QKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMP-RLSGIGLLSKITSHKICKDIPVIMMSSNDSMGT-VFKCLSK 177          
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.387e-19
Identity = 59/148 (39.86%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  268 EDESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVPNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMAP*KF*GAKFF*CLTK 711
            E+E      ++  NG  G +Q+              + + WERFL  R+++VLLVENDD TR++V+ALLRNCSYEV   +N + AWK+LEDL NHIDIV         +     + K+   K+ +NIPV  M+     G   F CL+K
Sbjct:   36 EEEKTNGITMDVRNGSSGGLQI-------PLSQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLT-EVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGL-VFKCLSK 174          
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.666e-14
Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  388 WERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVPNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMAP*KF*GAKFF*CLTK 711
            WERF+  +++KVLLV++DDSTR VVSALLR+C YEV    N   AW  LED+ N ID+V         +   S ++++      KNIPV  M+     G   F CL+K
Sbjct:   53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMP-GVSGISLLSRIMNHNICKNIPVIMMSSNDAMGT-VFKCLSK 158          
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 6.666e-14
Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  388 WERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVPNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMAP*KF*GAKFF*CLTK 711
            WERF+  +++KVLLV++DDSTR VVSALLR+C YEV    N   AW  LED+ N ID+V         +   S ++++      KNIPV  M+     G   F CL+K
Sbjct:   53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMP-GVSGISLLSRIMNHNICKNIPVIMMSSNDAMGT-VFKCLSK 158          
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.137e-13
Identity = 40/110 (36.36%), Postives = 67/110 (60.91%), Query Frame = 1
Query:  337 DGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVPNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMA 666
            DG            V++WE++LP   L+VLLVE+D STR +++ALLR C Y+V AV++ L AW++L++ +++ID++         I  ++ +A +   +  KNIPV  M+
Sbjct:   11 DGMETIKNRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILT-ELDLPSISGFALLALVMEHEACKNIPVIMMS 119          
BLAST of EY727847 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 4.321e-13
Identity = 39/96 (40.62%), Postives = 59/96 (61.46%), Query Frame = 1
Query:  379 VIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVPNGGKHACCIRNWSFMAKL*RKKTLKNIPVKRMA 666
            +++WERFLP  +L+VLLVE DDSTR +++ALLR CSY V AV + L AW++L+     +D++         I  ++ +  +      KNIPV  M+
Sbjct:   38 LVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILT-EVDLPSISGYALLTLIMEHDICKNIPVIMMS 132          
The following BLAST results are available for this feature:
BLAST of EY727847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
APRR3_ARATH1.059e-2746.54Two-component response regulator-like APRR3 OS=Ara... [more]
PRR73_ORYSI3.899e-2241.07Two-component response regulator-like PRR73 OS=Ory... [more]
PRR73_ORYSJ1.134e-2140.48Two-component response regulator-like PRR73 OS=Ory... [more]
APRR7_ARATH1.387e-1939.86Two-component response regulator-like APRR7 OS=Ara... [more]
PRR37_ORYSJ6.666e-1443.52Two-component response regulator-like PRR37 OS=Ory... [more]
PRR37_ORYSI6.666e-1443.52Two-component response regulator-like PRR37 OS=Ory... [more]
APRR9_ARATH1.137e-1336.36Two-component response regulator-like APRR9 OS=Ara... [more]
APRR5_ARATH4.321e-1340.63Two-component response regulator-like APRR5 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-D08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727847 ID=EY727847; Name=EY727847; organism=Citrus sinensis; type=EST; length=1025bp
CCACGCGTCCGAAAAATAGAGTTCCTAATAATTAAGATTTGATAAATGGT
GGCTTGATCTTATTCTCTGGATAAAGAGTGAAGAGTTTGGTTCTGTGGAC
AACATAAAATACAAACATGGTAGATTGAACAAAGGGTATCCTGTACTGTT
TTTATTGAATTTGGTTTATATAGTGGGCTGGTAATCCTAAACGGCAGTAT
GTGTTATGAGCAAAAGGAAGTTGGGAATGGAGTGGCTGGTGAGGGTCATG
GTCTGGGCTCATCAGAGGAAGATGAGTCAAGGGTTGACGATGCTGTTAAC
TCAAACAATGGGCCTGGTGGAACAATTCAGGTCCATGATGGTTTCCAGAT
ATCACAACAACAACAACCTCAAGGTTCTGTGATACGTTGGGAGAGGTTTC
TGCCTACTAGGTCGTTGAAGGTTCTTCTAGTGGAAAATGATGATTCAACT
CGCCATGTTGTCAGCGCTCTGCTGCGGAATTGCAGTTATGAAGTTACTGC
TGTTGCAAACAGCCTTCATGCATGGAAGATTCTTGAAGATCTTACTAATC
ATATTGATATTGTTCCAAACGGAGGTAAACATGCCTGTTGTATCAGGAAT
TGGTCTTTTATGGCAAAATTATGACGCAAAAAAACTCTAAAAAACATTCC
CGTGAAAAGGATGGCCCCCTAAAAATTCTAAGGGGCTAAATTCTTTTAGT
GTTTAACCAAAAGGTGGGGCCCAATTTTTTAATGGAAACCCAATAAAAGA
AAAAAGAAACTTAAAAAATCCCCGGGGCCACAATGTTTTGGAAAAAAAAA
GCCCCCATTTCCAAGGGGGCAATGGGGGAATTGGGGCAGTGGGTTAAATG
GAAAATGTGGGAAAACCACAAAACTAAAAAAAAAATCTCGCCCAAAAAAG
CATCAAAAAATTAAAAACCGCAAGGCCTCTTTAAAAAAAAGATGAAAAAT
TAACCACCACCAGGGGGGTTTGATAGTGAAAACCTCTCTGTGATAAAAAT
AGTGGGGGGGAACACCACTCACACC
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