EY727842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY727842 vs. ExPASy Swiss-Prot
Match: PPR82_ARATH (Pentatricopeptide repeat-containing protein At1g55890, mitochondrial OS=Arabidopsis thaliana GN=At1g55890 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.703e-23 Identity = 53/106 (50.00%), Postives = 75/106 (70.75%), Query Frame = 1 Query: 82 TTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNNGIYTGTVQHLANAKRFRWIEEILEHHKQYKDISKEGFTARLIALYRKTAMYENARKVYQDMP 399 T A + K + S++ G E N KR+V+KFKK+ + RFRTN +Y TV+ L AKR ++EEILE K+Y+D+SKEGF AR+I+LY K M+ENA+KV+++MP Sbjct: 34 TAAISPPQKSLTSLVNG---ERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMP 136
BLAST of EY727842 vs. ExPASy Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.917e-21 Identity = 50/114 (43.86%), Postives = 71/114 (62.28%), Query Frame = 1 Query: 58 RLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNNGIYTGTVQHLANAKRFRWIEEILEHHKQYKDISKEGFTARLIALYRKTAMYENARKVYQDMP 399 R S + AT + PK S+I + E + K + +KFKK+ FR N +Y TV+ LA AK+F W+EEILE +Y ++SKEGF AR+I LY + M+ENA+KV+ +MP Sbjct: 22 RFFSAVTAAAATPSPPK--PSLITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMP 133 HSP 2 Score: 28.4906 bits (62), Expect = 1.917e-21 Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = 2 Query: 401 ERNCEQKVLYV*LQSWGRAINSKKLDKVDGVIKKFTPQS*EFEPDL 538 ERNC++ L +NSKK D V+G+ K+ P EPD+ Sbjct: 134 ERNCKRTALSF-NALLNACVNSKKFDLVEGIFKEL-PGKLSIEPDV 177
BLAST of EY727842 vs. ExPASy Swiss-Prot
Match: PP225_ARATH (Pentatricopeptide repeat-containing protein At3g13150 OS=Arabidopsis thaliana GN=At3g13150 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13 Identity = 44/135 (32.59%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 28 TQNTTMSFPSRLLSCSFSTTATATGPKFIGSVIRGIYKENNLKRLVDKFKKSSDLGRFRTNNGIYTGTVQHLANAKRFRWIEEILEHHKQYKDISKEGFTARLIALYRKTAMYENARKVYQDMP*TEL*AEGSVR 432 +Q + FPS+L + ST + G + K + L + V+KFK+S + FR +G+Y+ ++ L AK+F I+E+L++ K++ DI E F R++ LY + M E+A K++ +MP EL E +V+ Sbjct: 31 SQTKSTKFPSKLKA---STASVGDGGQSSNDAKDS--KNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP--ELNCERTVK 158 The following BLAST results are available for this feature:
BLAST of EY727842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY727842 ID=EY727842; Name=EY727842; organism=Citrus sinensis; type=EST; length=847bpback to top |