EY727839

Overview
NameEY727839
Unique NameEY727839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY727839 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.892e-13
Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 3 
Query:   48 MEAKSTTSMGSSLAVPLIQELAKN-TPTTVPSRFIVNDEDHVPLISSSE-QVLIPVIDMQKLLSGDFMDSELGKLDHACREWGFFQ 299
            MEAK      SS+ VP +QE+ K  T TTVP R++ +D+D   +    + ++ IP+IDM++L S   MDSE+ KLD AC+EWGFFQ
Sbjct:    1 MEAKGAAQW-SSILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQ 85
The following BLAST results are available for this feature:
BLAST of EY727839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SRG1_ARATH3.892e-1347.67Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-C11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727839 ID=EY727839; Name=EY727839; organism=Citrus sinensis; type=EST; length=955bp
AGAAAAGAAAAAATCATTAGCTAGAAGAAAAAGATCAGCTGGATGCAATG
GAGGCAAAATCAACGACGTCGATGGGGAGTTCTCTGGCGGTGCCTTTGAT
TCAGGAGCTGGCAAAGAATACACCCACTACAGTTCCATCACGTTTTATTG
TCAATGATGAGGACCATGTTCCGCTCATCAGCTCTTCAGAACAAGTACTC
ATTCCAGTCATTGACATGCAGAAGTTGCTCTCTGGAGATTTCATGGATTC
AGAGCTTGGGAAGCTTGACCATGCCTGTCGAGAGTGGGGCTTCTTCCAGA
GATACCTTGGAAGCTTGGTCAGCAGAACTTGGAAATCTTTCTCAAAAATT
ACTTCGCCAAATGGCAAAAGCACTTGGAATAGATGCCAATGATGTAAAAG
CGTTGTTTGAAGAAGCAATGCAAACAATGAGGATGAATTACTATCCTCCA
TGTCCAAAACCTGAGCATGTTTATCGGCTTTAATTCTCATTCCGATGCCT
CTTCAATTACCATTCCCCTCCCCACTCCAATTGAAACGGCTGGGCCTTTC
AAATAAAAAAAGATTGGGAATGGGGGTTTCCCTGGTGAAACCCCTCCCTG
AAGGCTTTTAACATTAAAGGTTGGGGGGACATTTTGGAAGGAAAATCTTT
TTTTATTTTTAATTGCCCTATAATTTGCCTGTTTTTGATTTCCTTTTTTT
TCCAAATGGGTTTAAAGGAAAAAATTTTTATACCAAAATTGGTATGGAAA
TTAATACCAGAACTAAAATACACAATGGGATTAGAAAAAAAAAAAACAAT
AAACCCCACTTTATAAATTTTCAAGGTTTTTTGCTAAATGGGAGAAATTT
AACACAAATAAAATGAGACACACGGGGGACACCCGAACAAATTATGAAAA
AAAAGAAAAGGGTTTAAGTTTAAAGCGCGAAAATTTAATAACACAAAAAT
AGGAA
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