EY727838

Overview
NameEY727838
Unique NameEY727838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length981
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 6.642e-48
Identity = 93/118 (78.81%), Postives = 104/118 (88.14%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 400
            Q AMGTLDGIIDTVSA HP+LPLLGLLKSQGK+++VG PDKPLELPV  L+ GRK ++GS  GGMKETQEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  243 QSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.932e-47
Identity = 93/116 (80.17%), Postives = 104/116 (89.66%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            Q A+GT+DGIIDTVSA HP+LPL+GLL S GKLV+VGAP+KPLELPV  L+MGRK V+GS  GGMKETQEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  240 QAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.760e-46
Identity = 88/116 (75.86%), Postives = 105/116 (90.52%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            Q A GTL GIIDTVSA+HP++PLLGLLK  GKLV+VGAP+KPLELPV  L+MGRK ++GS+ GG+KETQEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  219 QAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.760e-46
Identity = 91/117 (77.78%), Postives = 103/117 (88.03%), Query Frame = 2
Query:   53 AMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 403
            AMGT+DGIIDTVSA HP+LPLLGLLK++GKLV+VGAP +PLELPV  LI GRK V GS  GG+KETQEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  240 AMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 8.976e-45
Identity = 91/114 (79.82%), Postives = 100/114 (87.72%), Query Frame = 2
Query:   53 AMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            AMGT+DGIIDTVSA H +LPLLGLLK +GKLV+VGAP+KPLELPV+ LI  RK V GS  GG+KETQEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  240 AMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.455e-44
Identity = 87/120 (72.50%), Postives = 105/120 (87.50%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 406
            + AMGT+DGIIDTVSA H I PL+GLLKS GKLVL+GA +KP ++   SLI+GRK+++GS  GGM+ETQEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTLAAT+
Sbjct:  243 KAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.872e-42
Identity = 84/116 (72.41%), Postives = 97/116 (83.62%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            +GA  +LDGIIDTV   HP+ PL  LLK  GKLV+VGAP+KP ELPV SL+ GRK + G+  GG+KETQEM+DFAAKHNITAD+EVI MDYVNTAMERL K+DVRYRFVIDIANT+
Sbjct:  242 KGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGGTINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTM 357          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.872e-42
Identity = 82/116 (70.69%), Postives = 100/116 (86.21%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 394
            Q A+GTLDGIIDTVSA HPI+PLL LLK  GKL++VG PDKPL+LPV  LI GR+T++GS  GG+KETQEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  242 QAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 2.444e-42
Identity = 82/117 (70.09%), Postives = 100/117 (85.47%), Query Frame = 2
Query:   47 QGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLA 397
            + A+GT+D IIDT+SAVH + PLLGLLK  GKL+ +G P+KPLELP+  L++GRK V GS  GGMKETQEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L+
Sbjct:  242 KAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLS 358          
BLAST of EY727838 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.752e-40
Identity = 82/114 (71.93%), Postives = 96/114 (84.21%), Query Frame = 2
Query:   62 TLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 403
            TLDGIIDTVSA H I+PL+GLLKS GKLVL+GA +KPLELP   LI+GRK V G+  GG+KETQEMIDF+ KHN+  +IEV+ MDYVN AM+RLAKADV+YRFVID+ANTL  T
Sbjct:  249 TLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
The following BLAST results are available for this feature:
BLAST of EY727838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
MTDH_MESCR6.642e-4878.81Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_FRAAN1.932e-4780.17Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_PETCR4.760e-4675.86Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH4.760e-4677.78Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH8_ARATH8.976e-4579.82Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH6_ARATH4.455e-4472.50Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH_APIGR1.872e-4272.41Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
GEDH1_OCIBA1.872e-4270.69Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH9_ARATH2.444e-4270.09Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH3_STYHU1.752e-4071.93Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-C10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727838 ID=EY727838; Name=EY727838; organism=Citrus sinensis; type=EST; length=981bp
GACCCGGGGTCGGGGATTCCCGGGTCGACCACGCGTCCGACTTCATCAGG
GTGCCATGGGCACATTGGATGGTATTATTGACACGGTGTCCGCTGTGCAC
CCCATTTTGCCATTGCTCGGTCTATTAAAGTCCCAGGGCAAGCTTGTTCT
GGTTGGTGCTCCGGACAAGCCACTCGAGCTACCTGTGATTTCCTTAATTA
TGGGGAGGAAGACGGTGTCAGGGAGCAGCACTGGGGGAATGAAAGAGACG
CAAGAGATGATTGATTTTGCAGCAAAACACAATATAACAGCTGACATTGA
GGTTATTTCGATGGATTATGTCAATACGGCAATGGAGCGGCTCGCCAAGG
CTGATGTTCGGTATCGATTTGTCATTGATATTGCAAACACCTTGGCCGCC
ACCAAACCTTGAAGAATCAGAATCAGAATCAGATTGGTGTCTTCAATTCA
CAACTTTGTTCCATGATCCACTTTGCTATATGTAATGCTCCCTCGATCAT
TACACTCTTTTAGCGCTTAAATTACTTTTAATTTTCCGTTACCTCACCCT
AATTATGTCGTGATTGCCCAAAAACTATAAATGTTATTGAAAATAAAACA
TTGTTCCTTTTACACCAATTATATTAAATTTAAAAAAAAAAGAAGAAAAG
AGGATAATAAAAAATAAAAAAATAAATTACGCTAGAACTGACGATAGCTA
CAATGTGAAAGAGGAATAGAAAAAAGAAAATAGATAGGGGGGGGCGCCCC
CCAAAAGAAACTAATTATAATTTCGCGGGGGGGGCGGACCAAATAAATTC
TCTTAAAAAAGGAGGCCCAAAAAATTTTTAATGCGGGGGGGCCCTATTTT
AAAAAACAACTTGGTGGAGGGAGAAAAAACCACGGGGGGTATACCACACC
ATTATATCCTCTACGGAACCAAACCACCCCCACTTTTTCTCACCGCGGGG
GGGGAAAGAAAAAAAAAAAAAAGAAAAGTCC
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