EY727825

Overview
NameEY727825
Unique NameEY727825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length979
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY727825 vs. ExPASy Swiss-Prot
Match: GPTC8_MOUSE (G patch domain-containing protein 8 OS=Mus musculus GN=Gpatch8 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.311e-13
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1 
Query:  262 DVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEEDDFFTAEENIQRRKLDIEVEDTEENAKK 519
            ++EQASLD  + S NIG RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E +  +  +   +RR L++E EDTEE  +K
Sbjct:   28 EIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQK 114
[Close]
BLAST of EY727825 vs. ExPASy Swiss-Prot
Match: GPTC8_HUMAN (G patch domain-containing protein 8 OS=Homo sapiens GN=GPATCH8 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.311e-13
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1 
Query:  262 DVEQASLDTKLTSSNIGFRLLQKMGWK-GKGLGKDEQGIIEPIKSGIRDPKLGVGKQEEDDFFTAEENIQRRKLDIEVEDTEENAKK 519
            ++EQASLD  + S NIG RLLQK GWK G+GLGK  QG  +PI   ++   +G+G+ E +  +  +   +RR L++E EDTEE  +K
Sbjct:   28 EIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQK 114
The following BLAST results are available for this feature:
BLAST of EY727825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GPTC8_MOUSE5.311e-1345.98G patch domain-containing protein 8 OS=Mus musculu... [more]
GPTC8_HUMAN5.311e-1345.98G patch domain-containing protein 8 OS=Homo sapien... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-106-B07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727825 ID=EY727825; Name=EY727825; organism=Citrus sinensis; type=EST; length=979bp
AGAAGACCAGCAAGAGATCAGAAGCAGAGCTAGATTCTCTTTATGATCAG
AAATCATCCTATATACCTTTTGCCGCTTTTGTGGTGAATTAGGTGATAAG
AAATGGATTATGGATGGTACAATGGTAAACAGGGACTAAGCGGTAGAGAT
AAACAGCCACATGAAAAGGAGCAGGCATATCAGGACTCTGTTATTGAGGA
TTTGGCGGAGGATTTTCGATTGCCAATCCATCAAAAGCCGATAGAGAATG
TTGACCTGGATGATGTGGAACAAGCGTCATTAGATACAAAGCTCACATCA
TCAAATATTGGGTTTAGGCTTCTCCAAAAGATGGGGTGGAAAGGAAAAGG
TCTTGGGAAGGATGAGCAAGGAATAATAGAACCGATAAAATCTGGGATTA
GAGATCCAAAGTTGGGGGTTGGAAAACAGGAAGAAGATGATTTTTTCACT
GCAGAAGAAAATATCCAGCGAAGAAAACTTGATATCGAGGTAGAGGACAC
TGAGGAGAATGCAAAGAAACGGGAGGTATGCTTTTACACTCGTAGATAAT
CAACATAATTAATTTAACGTAAACTTTGATGCTTTACTTCCTCTGAAACA
CCCCTCCAATAGCAAAAAGGGAGCAATAACCATAAATTGTTTGGCTTTTT
GACCAAAATGGTATATCCATAGGGGAATATTCACTTTTTGGAACCTTCTT
TCAAAAAATCCTGGCATTTTTTTATAACCGGGGGGGGCTTTCCACGGCCC
CCCTTTCCGGGCCCCCTTTATAAAAAATTTCCGGGGGTTAAACCCAAAAC
GTGGGGCCCAAAAAAATTTTAAAACTTGGGGAGGGGGAAAAAAAAAATCC
CCCAGGGGGGGTGTTTTTTTTTTGGGGAAATTTTTTTTTTAAAAAAAAAA
CAAAAAACAAAAAATTTGGGGGGTGGGGGGGGGATTTTTTTTTGAACACC
CCCCCCCTCTTTCGGGAAAACCTCTCTTC
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