EY754041

Overview
NameEY754041
Unique NameEY754041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_PEA (Imidazoleglycerol-phosphate dehydratase OS=Pisum sativum GN=HIS3 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30
Identity = 91/199 (45.73%), Postives = 111/199 (55.78%), Query Frame = 1
Query:  190 STQYCSSTRRMNSLTTPRASLNPDGDSKHNNGSASTSSAVD-SGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAG 783
            S  + + T  MN  TT   SL+     +HNNGS STS       R+GEVKRVTKETNVSVKIN+DGSGVADSST IPFLDHMLDQLAS GLFDV V+ATGD+ I DH  +ED                        F +    AL+HV     G P    +L +P + V  +DT +   F + + +T G  L  R +AG
Sbjct:   44 SPNHLTLTTPMNPPTT---SLSSAAFVEHNNGSTSTSLPFHPETRVGEVKRVTKETNVSVKINLDGSGVADSSTGIPFLDHMLDQLASHGLFDVHVKATGDVHIDDHHTNEDVALAIGTALLQALGDRKGINRFGDFSAPLDEALIHVSLDLSGRPHLSYNLDIPTQRVGTYDTQVVEHFLQSIVNTSGMTLHIRQLAG 239          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7B_ARATH (Imidazoleglycerol-phosphate dehydratase 2 OS=Arabidopsis thaliana GN=At4g14910 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.507e-30
Identity = 95/213 (44.60%), Postives = 116/213 (54.46%), Query Frame = 1
Query:  169 SRKLLPISTQYCSSTRR------MNSLTTPRASLNPDGDSKHNNG--SASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAG 783
            SR LLP  T   SS         MNS +  R S++       +NG  + +T+S ++S RIGEVKR TKETNVSVKIN+DG GV+DSST IPFLDHMLDQLAS GLFDV VRATGD  I DH  +ED                        F +    AL+HV     G P    +L +P + V  +DT L   FF+ L +T G  L  R +AG
Sbjct:   18 SRALLPPRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTASPIESARIGEVKRETKETNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAG 230          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7A_ARATH (Imidazoleglycerol-phosphate dehydratase 1 OS=Arabidopsis thaliana GN=At3g22425 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 4.581e-30
Identity = 94/208 (45.19%), Postives = 118/208 (56.73%), Query Frame = 1
Query:  166 LSRKLLPISTQYCSSTR--RMNSLTTPRASLNPDGDSKHNNGSASTSSAVDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAG 783
            L R+ + +S+   S  R  RM S +  R S++          SAS+SS++  GRIGEVKRVTKETNVSVKIN+DG+GVADSS+ IPFLDHMLDQLAS GLFDV VRATGD+ I DH  +ED                        F +    AL+HV     G P    +L +P + V  +DT L   FF+ L +T G  L  R +AG
Sbjct:   30 LPRRAMIVSSPSSSLPRFLRMESQSQLRQSISC---------SASSSSSMALGRIGEVKRVTKETNVSVKINLDGTGVADSSSGIPFLDHMLDQLASHGLFDVHVRATGDVHIDDHHTNEDIALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAG 228          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_WHEAT (Imidazoleglycerol-phosphate dehydratase (Fragment) OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.864e-23
Identity = 73/153 (47.71%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  325 GEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAG 783
            GEVKRVTKETNV VKIN+DG+GVA+SST IPFLDHMLDQLAS GLFDV V+ATGD  I DH ++ED                        F +    A V V+    G P     L +P   V  +DT L   FF+ L +T G  L  R +AG
Sbjct:    1 GEVKRVTKETNVHVKINLDGTGVANSSTGIPFLDHMLDQLASHGLFDVYVKATGDTHIDDHHSNEDIALAIGTALLQALGDRKGINRFGHFTAPLDEAAVEVILDLSGRPHLSCGLSIPTERVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAG 153          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_SYNR3 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain RCC307) GN=hisB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16
Identity = 61/157 (38.85%), Postives = 76/157 (48.41%), Query Frame = 1
Query:  316 GRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAGV 786
            GR G + RVT ET V V I +DGSG  + ST +PFLDHML QLAS GLFD+ + ATGD  I DH  +ED                        F +    ALV V     G P     L +PA+ +  +DT L   FF  + +  G  L  R + GV
Sbjct:    2 GRQGNIHRVTGETEVRVAIGLDGSGQCEVSTGVPFLDHMLHQLASHGLFDLTISATGDTHIDDHHTNEDVGIALGQALGQALADRRGIHRFGHFVAPLDEALVQVALDCSGRPHVSYSLAIPAQKIGSYDTELVKEFFVAVANNAGLTLHIRQLDGV 158          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_PROMT (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain NATL2A) GN=hisB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  307 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAG 783
            ++  R GE++R TKET+V VKI++DGSG   ++T I FLDHM+ QL+S GLFD+ VRA GD  I DH  +ED                        F +    AL+ V+    G P     L +P++ V  +DT L   FF  +    G  L  R +AG
Sbjct:    1 MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHIDDHHTNEDVGIAIGQALSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSFSLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAG 159          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_PROM1 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain NATL1A) GN=hisB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.690e-16
Identity = 59/159 (37.11%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  307 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAG 783
            ++  R GE++R TKET+V VKI++DGSG   ++T I FLDHM+ QL+S GLFD+ VRA GD  I DH  +ED                        F +    AL+ V+    G P     L +P++ V  +DT L   FF  +    G  L  R +AG
Sbjct:    1 MEKTREGEIRRETKETDVFVKIDLDGSGKCSANTGIGFLDHMIQQLSSHGLFDIEVRANGDTHIDDHHTNEDVGIAIGQALSKALGDRVGIKRFGHFLAPLDEALIQVVVDCSGRPHLSFSLDIPSQKVGTYDTELVKEFFGAVVSNGGLTLHIRQLAG 159          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_PROM5 (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain MIT 9515) GN=hisB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15
Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 1
Query:  307 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHED 522
            + S R  E+KR T ET++S+ IN+DG+G+++  T IPFLDHML Q++S GLFD+ +RA GD  I DH  +ED
Sbjct:    1 MSSSRQAEIKRKTNETDISIFINIDGNGISEIDTGIPFLDHMLHQISSHGLFDLKIRAIGDTHIDDHHTNED 72          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_SYNS9 (Imidazoleglycerol-phosphate dehydratase OS=Synechococcus sp. (strain CC9902) GN=hisB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 56/156 (35.90%), Postives = 77/156 (49.36%), Query Frame = 1
Query:  319 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAGV 786
            R GEV R T ET+V VK+++DGSG  ++ST +PFLDHML+Q++S GL D+ + A GD  I DH  +ED                        F +    ALV V     G P     L +P + +  +DT L   FF  + +  G  L  R + GV
Sbjct:    2 RTGEVHRHTGETDVKVKLDLDGSGCCEASTGVPFLDHMLNQISSHGLIDLTITAVGDTHIDDHHTNEDVGIAVGQALSQALGDRKGIHRFGHFVAPLDEALVQVALDCSGRPHISYGLTIPTQKIGSYDTELVKEFFVAVANNSGLTLHIRQLDGV 157          
BLAST of EY754041 vs. ExPASy Swiss-Prot
Match: HIS7_PROMS (Imidazoleglycerol-phosphate dehydratase OS=Prochlorococcus marinus (strain AS9601) GN=hisB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.440e-15
Identity = 58/159 (36.48%), Postives = 78/159 (49.06%), Query Frame = 1
Query:  307 VDSGRIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASLGLFDVPVRATGDIPIGDHPAHEDXXXXXXXXXXXXSW*WARN*SGW*FYSFSC*ALVHVLSGFFGPPPFILDLVLPARGVVCFDTLLGGPFFRLLGDTFGCALLFRSVAG 783
            + S R  E+KR T ET++SV IN+DGSG+++  T IPFLDHML Q++S GLFD+ ++A GD  I DH  +ED                        F++    ALV V     G P    DL L A  +  +DT L   FF    +  G  L    + G
Sbjct:    1 MSSLRQSEIKRKTNETDISVFINLDGSGISEIDTGIPFLDHMLHQISSHGLFDLQIKAIGDTHIDDHHTNEDVGIALGKAFSKALGERKGISRFGHFFAPLDEALVQVTLDCSGRPHLSYDLQLKAPRIGNYDTELVREFFIAFVNNSGITLHINQIRG 159          
The following BLAST results are available for this feature:
BLAST of EY754041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
HIS7_PEA3.507e-3045.73Imidazoleglycerol-phosphate dehydratase OS=Pisum s... [more]
HIS7B_ARATH3.507e-3044.60Imidazoleglycerol-phosphate dehydratase 2 OS=Arabi... [more]
HIS7A_ARATH4.581e-3045.19Imidazoleglycerol-phosphate dehydratase 1 OS=Arabi... [more]
HIS7_WHEAT1.864e-2347.71Imidazoleglycerol-phosphate dehydratase (Fragment)... [more]
HIS7_SYNR31.294e-1638.85Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_PROMT1.690e-1637.11Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROM11.690e-1637.11Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_PROM51.431e-1552.78Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]
HIS7_SYNS92.440e-1535.90Imidazoleglycerol-phosphate dehydratase OS=Synecho... [more]
HIS7_PROMS2.440e-1536.48Imidazoleglycerol-phosphate dehydratase OS=Prochlo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-A03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754041 ID=EY754041; Name=EY754041; organism=Citrus sinensis; type=EST; length=803bp
ANAAAAACTCGGCGTTTTAGCAAAAGCCGTGTTCCTGTTGCTACTCTCTC
TGCGACATTGGAAACGATAGTGTGTAAAATGGAGCTCTCGGTCCCAGCTC
GCCTTGTTCGCCTTTCAATCTCGTCCACGTCCTCACGCCGGCTCCTCGTT
AAACCAAAAACCAATCTCTCTCGTAAACTTCTCCCCATCTCCACACAATA
CTGCTCCTCAACGCGCCGCATGAACTCCCTCACAACACCACGCGCCTCTC
TAAACCCAGACGGCGACAGCAAACACAACAACGGGTCCGCCTCAACTTCC
TCTGCCGTCGATTCTGGTCGAATTGGGGAAGTGAAAAGAGTCACGAAAGA
GACCAACGTTTCTGTGAAGATTAACGTCGATGGCTCTGGCGTTGCTGATT
CATCCACTTGCATTCCCTTCCTAGATCACATGCTTGATCAACTGGCTTCG
CTCGGGCTATTTGATGTGCCCGTGAGGGCAACCGGGGACATTCCCATTGG
TGATCATCCTGCCCATGAAGACGTTGGGCTTGCCCTTGGCACCGGCNTTG
TTGGGGGCTCTTGGTGATGGGCAAGGAATTAATCGGGTTGGTGATTTTAC
AGCTTCTCTTGTTGAGCTTTGGTTCATGTTTTGTCGGGTTTTTTTGGACC
GCCCCCTTTTATTTTGGATTTGGTGCTTCCCGCCCGGGGTGTTGTGTGCT
TCGACACTCTTTTGGGTGGGCCCTTTTTCCGTCTTTTAGGGGACACTTTT
GGATGTGCTCTTCTTTTTCGTTCTGTTGCGGGCGTCTGGCTCTCTTCCTT
TGT
back to top