EY754029

Overview
NameEY754029
Unique NameEY754029
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.111e-23
Identity = 63/152 (41.45%), Postives = 91/152 (59.87%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G +KL+++RIENKS  QVTFSKRR+GLI+KAR+LSVLCD  +AL++ S+ G+LY F S D+L  IL+RY  + A++       KA D Q+   +   H ELL++V  +L G N +  +                  RA KT+LM+  +  L+
Sbjct:    2 GRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDL------KALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLK 147          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.982e-23
Identity = 63/155 (40.65%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS---RIAEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G  +++L+RIENK   QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+   LERYQ       E  +++        Q  Y  L    E L+  QR L G +     +                IR+ +TQLM+  ++ LQ
Sbjct:    2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQ 156          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.042e-22
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQ---AGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G   +QL+RIENK   QVTFSKRR+GL+KKA E+SVLCD D+AL++FS++G+LYEF S  S+  ILERYQ R + +  A   P  ED +     Y  L    + L+  QRQL G   +  T                 IR+ K QL+  SI  LQ
Sbjct:    2 GRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQ-RYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQ 155          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.042e-22
Identity = 68/155 (43.87%), Postives = 88/155 (56.77%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQ---AGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G   +QL+RIENK   QVTFSKRR+GL+KKA E+SVLCD D+AL++FS++G+LYEF S  S+  ILERYQ R + +  A   P  ED +     Y  L    + L+  QRQL G   +  T                 IR+ K QL+  SI  LQ
Sbjct:    2 GRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQ-RYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQ 155          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.033e-22
Identity = 65/164 (39.63%), Postives = 89/164 (54.27%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDP-----------QAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQA 515
            G  +++L+RIENK   QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+   LERYQ          GAP+   P           Q  Y  L    + L+  QR L G +    +                 IRA++TQ M+  +  LQ+
Sbjct:    2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQK------CNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQS 159          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: MAD34_ORYSJ (MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica GN=MADS34 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 5.173e-22
Identity = 61/154 (39.61%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRI--AEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G  K+ LQRIENK   QVTF+KRR+GL+KKA ELS+LCD ++ALV+FS  GRLY+F S+ ++   LERYQ  I  +++A A  + + ++    Y +L  H E+L+  QR L G +                      IR+ KTQ+++  +  L+
Sbjct:    2 GRGKVVLQRIENKISRQVTFAKRRNGLLKKAYELSILCDAEVALVLFSHAGRLYQFSSSSNMLKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATNELEQLESQVVRTLKQIRSRKTQVLLDELCDLK 155          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQ--SRIAEEAVASGAPKAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G  +++L+RIENK   QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ ++   L+RYQ  S  + E     A + E+    Y  L    E L+  QR L G +     +                +R++KTQ M+  +  LQ
Sbjct:    2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQ 155          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 65/156 (41.67%), Postives = 86/156 (55.13%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAPKAEDPQAG----YSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G  K+QL+RIENK   QVTFSKRRSGL+KKA E+SVLCD ++AL+IFS++G+LYE+ +   +  ILERY+     E V   A    D Q      Y  L    E ++  Q+ L G + E                    IR+ K+QLM+ SI  LQ
Sbjct:    2 GRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISA--ESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQ 155          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: AGL9_SINAL (Agamous-like MADS-box protein AGL9 homolog OS=Sinapis alba GN=AGL9 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.825e-22
Identity = 65/158 (41.14%), Postives = 89/158 (56.33%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQS---RIAEEAVASGAPKAED--PQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQA 515
            G  +++L+RIENK   QVTF+KRR+GL+KKA ELSVLCD ++AL+IFS+RG+LYEFCS+ S+   LERYQ       E  V S    A +   Q  Y  L    + L+  QR L G +    +                 IRA++TQ M+  +  LQ+
Sbjct:    2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMIRTLERYQKCNYGPPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELELLERQLDSSLKQIRALRTQFMLDQLNDLQS 159          
BLAST of EY754029 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.153e-21
Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = 3
Query:   57 GPEKLQLQRIENKSRCQVTFSKRRSGLIKKARELSVLCDVDLALVIFSSRGRLYEFCSADSLASILERYQSRIAEEAVASGAP--KAEDPQAGYSSLHVHDELLKIVQRQLEGPNFEQFTATXXXXXXXXXXXXXXXIRAVKTQLMMGSIRTLQ 512
            G  +++L+RIENK   QVTF+KRR+GL+KKA ELSVLCD ++AL++FS+RG+LYEFCS   +   LERYQ R +  ++ +  P  + E     Y  L    ++L+   R L G +  + +                 IR++KTQ M+  +  LQ
Sbjct:    2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQ-RCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQ 154          
The following BLAST results are available for this feature:
BLAST of EY754029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
FLC_ARATH6.111e-2341.45MADS-box protein FLOWERING LOCUS C OS=Arabidopsis ... [more]
AGL9_PETHY7.982e-2340.65Agamous-like MADS-box protein AGL9 homolog OS=Petu... [more]
MAD18_ORYSJ1.042e-2243.87MADS-box transcription factor 18 OS=Oryza sativa s... [more]
MAD18_ORYSI1.042e-2243.87MADS-box transcription factor 18 OS=Oryza sativa s... [more]
SEP3_ARATH3.033e-2239.63Developmental protein SEPALLATA 3 OS=Arabidopsis t... [more]
MAD34_ORYSJ5.173e-2239.61MADS-box transcription factor 34 OS=Oryza sativa s... [more]
SEP1_ARATH6.757e-2240.26Developmental protein SEPALLATA 1 OS=Arabidopsis t... [more]
MAD14_ORYSJ6.757e-2241.67MADS-box transcription factor 14 OS=Oryza sativa s... [more]
AGL9_SINAL8.825e-2241.14Agamous-like MADS-box protein AGL9 homolog OS=Sina... [more]
CMB1_DIACA1.153e-2138.96MADS-box protein CMB1 OS=Dianthus caryophyllus GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-G11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754029 ID=EY754029; Name=EY754029; organism=Citrus sinensis; type=EST; length=866bp
ATTCCAAAACCGACCCACGCGTCCGCTCAATCTAGGTCGGCATTGGGTCA
GAAAATGGGCCCGAAAAGCTTCAACTACAGCGAATTGAAAACAAAAGCCG
ATGTCAAGTAACGTTCTCAAAGCGGCGTAGCGGATTGATCAAGAAGGCTC
GTGAGCTCTCCGTCCTCTGCGACGTCGACTTGGCGCTCGTCATCTTCTCC
AGCCGCGGTAGGCTTTACGAGTTCTGTAGCGCCGACAGTTTGGCCAGCAT
CCTTGAGCGCTACCAGAGTCGCATTGCAGAGGAAGCTGTAGCTTCAGGAG
CACCTAAGGCAGAGGACCCTCAGGCTGGATATTCGAGCCTGCATGTGCAT
GATGAACTGCTGAAAATAGTTCAAAGGCAACTTGAAGGTCCAAACTTTGA
GCAGTTCACTGCAACTGATCTTCTGCAGTTAGAGAATCTACTCAACGATA
CACTGACAGAAATTAGAGCTGTGAAGACACAACTGATGATGGGATCCATT
AGAACACTCCAAGCGAAGGAAAAGCTGCTGAGAGAAGAGAAAAAGCTTCT
AGAGGGAAAGATTGCAGCAGGGGAGAAGAGTGGNAATGATACAACAGCAG
CGGCTATGGCAACCCTCCCTTTGCTTAGATAAGCTGAGGAGAGGCGCTTT
TCCAAGTGTACTTTTCAGCCGCCCATCTGTTGTACTTAGTGAATATGTAA
GTCTGTTATCAGTGGCTTATTCTACGTAGCGAATAAATTGTAATGCTCTG
TACTACTANTAGGCGGCTAGATAATCAGGGAGCGGCTTCTGTAGAAGTTC
CACTGACTGCCGTTTTATATCTGCCATCATCAAACTTGCAGATGTTTTAT
TAAAAAAAAAAAAAAA
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